RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 HOXB5P09067 269 aa15.2■□□□□ 0.02
CHRNB1-206ENST00000574054 SLC25A6P12236 298 aa15.2■□□□□ 0.02
CHRNB1-206ENST00000574054 S100A5P33763 92 aa15.2■□□□□ 0.02
CHRNB1-206ENST00000574054 EMP1P54849 157 aa15.2■□□□□ 0.02
CHRNB1-206ENST00000574054 RPP30P78346 268 aaKnown RBP15.2■□□□□ 0.02
CHRNB1-206ENST00000574054 PPP1R1AQ13522 171 aa15.2■□□□□ 0.02
CHRNB1-206ENST00000574054 FOXI2Q6ZQN5 318 aa15.2■□□□□ 0.02
CHRNB1-206ENST00000574054 OR4B1Q8NGF8 309 aa15.2■□□□□ 0.02
CHRNB1-206ENST00000574054 CIB3Q96Q77 187 aaPredicted RBP15.2■□□□□ 0.02
CHRNB1-206ENST00000574054 SAV1Q9H4B6 383 aaPredicted RBP15.2■□□□□ 0.02
CHRNB1-206ENST00000574054 TMED3Q9Y3Q3 217 aa15.2■□□□□ 0.02
CHRNB1-206ENST00000574054 IGKV1OR2-108A0A075B7D4 117 aa15.19■□□□□ 0.02
CHRNB1-206ENST00000574054 ZNF79Q15937 498 aa15.19■□□□□ 0.02
CHRNB1-206ENST00000574054 THAP8Q8NA92 274 aa15.19■□□□□ 0.02
CHRNB1-206ENST00000574054 SOCS3O14543 225 aa15.18■□□□□ 0.02
CHRNB1-206ENST00000574054 SYNGR2O43760 224 aa15.18■□□□□ 0.02
CHRNB1-206ENST00000574054 ZNF705AQ6ZN79 300 aaPredicted RBP15.18■□□□□ 0.02
CHRNB1-206ENST00000574054 SLC25A22Q9H936 323 aa15.18■□□□□ 0.02
CHRNB1-206ENST00000574054 ISLRO14498 428 aa15.17■□□□□ 0.02
CHRNB1-206ENST00000574054 SPANXN5Q5MJ07 72 aa15.17■□□□□ 0.02
CHRNB1-206ENST00000574054 GGNBP1Q5YKI7 109 aa15.17■□□□□ 0.02
CHRNB1-206ENST00000574054 EBLN2Q6P2I7 272 aa15.17■□□□□ 0.02
CHRNB1-206ENST00000574054 NEU1Q99519 415 aa15.17■□□□□ 0.02
CHRNB1-206ENST00000574054 ZNF705FA8MVS1 300 aaPredicted RBP15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 F6UB75 175 aa15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 H3BP45 60 aa15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 CFDP00746 253 aaPredicted RBP15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 AMBPP02760 352 aa15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 ZNF705DP0CH99 300 aaPredicted RBP15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 ZNF705BP0CI00 300 aaPredicted RBP15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 GALR1P47211 349 aa15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 AKR1C1Q04828 323 aa15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 SPATA31B1PQ5VZV4 182 aa15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 DEDD2Q8WXF8 326 aa15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 C16orf92Q96LL3 132 aa15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 SLC35B3Q9H1N7 401 aa15.16■□□□□ 0.02
CHRNB1-206ENST00000574054 TMEM189A5PLL7 270 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 SMIM9A6NGZ8 99 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 SPART-AS1P0CW21 52 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 ORM2P19652 201 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 PSG9Q00887 426 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 FAM78BQ5VT40 261 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 SAMD13Q5VXD3 122 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 CCDC190Q86UF4 302 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 ZNF709Q8N972 641 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 BPIFCQ8NFQ6 507 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 NDUFAF3Q9BU61 184 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 SCRT1Q9BWW7 348 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 SLC25A32Q9H2D1 315 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 STRAPQ9Y3F4 350 aaKnown RBP15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 RFNGQ9Y644 331 aa15.15■□□□□ 0.02
CHRNB1-206ENST00000574054 PRSS46E5RG02 174 aa15.14■□□□□ 0.01
CHRNB1-206ENST00000574054 GATA2P23769 480 aaPredicted RBP15.14■□□□□ 0.01
CHRNB1-206ENST00000574054 MEOX2P50222 304 aa15.14■□□□□ 0.01
CHRNB1-206ENST00000574054 C20orf173Q96LM9 149 aa15.14■□□□□ 0.01
CHRNB1-206ENST00000574054 CLUHP3Q96NS8 147 aa15.14■□□□□ 0.01
CHRNB1-206ENST00000574054 C7orf50Q9BRJ6 194 aaKnown RBP15.14■□□□□ 0.01
CHRNB1-206ENST00000574054 RSG1Q9BU20 258 aa15.14■□□□□ 0.01
CHRNB1-206ENST00000574054 RPRMQ9NS64 109 aa15.14■□□□□ 0.01
CHRNB1-206ENST00000574054 GOLT1BQ9Y3E0 138 aa15.14■□□□□ 0.01
CHRNB1-206ENST00000574054 A0A0J9YX75 114 aa15.13■□□□□ 0.01
CHRNB1-206ENST00000574054 SMCO3A2RU48 225 aa15.13■□□□□ 0.01
CHRNB1-206ENST00000574054 ZNF98A6NK75 572 aa15.13■□□□□ 0.01
CHRNB1-206ENST00000574054 INPP1P49441 399 aa15.13■□□□□ 0.01
CHRNB1-206ENST00000574054 PAX9P55771 341 aa15.13■□□□□ 0.01
CHRNB1-206ENST00000574054 SPANXN2Q5MJ10 180 aa15.13■□□□□ 0.01
CHRNB1-206ENST00000574054 ACOT7LQ6ZUV0 252 aa15.13■□□□□ 0.01
CHRNB1-206ENST00000574054 OR1B1Q8NGR6 318 aa15.13■□□□□ 0.01
CHRNB1-206ENST00000574054 TMEM147Q9BVK8 224 aa15.13■□□□□ 0.01
CHRNB1-206ENST00000574054 SLC45A2Q9UMX9 530 aa15.13■□□□□ 0.01
CHRNB1-206ENST00000574054 ADAP1O75689 374 aa15.12■□□□□ 0.01
CHRNB1-206ENST00000574054 UBE2MP61081 183 aaKnown RBP15.12■□□□□ 0.01
CHRNB1-206ENST00000574054 HBE1P02100 147 aa15.11■□□□□ 0.01
CHRNB1-206ENST00000574054 P0DMU3 169 aa15.11■□□□□ 0.01
CHRNB1-206ENST00000574054 FAM231AP0DMU4 169 aa15.11■□□□□ 0.01
CHRNB1-206ENST00000574054 FAM231CP0DMU5 169 aa15.11■□□□□ 0.01
CHRNB1-206ENST00000574054 S100A7P31151 101 aa15.11■□□□□ 0.01
CHRNB1-206ENST00000574054 TRIQKQ629K1 86 aa15.11■□□□□ 0.01
CHRNB1-206ENST00000574054 TMEM182Q6ZP80 229 aaPredicted RBP15.11■□□□□ 0.01
CHRNB1-206ENST00000574054 DOK5Q9P104 306 aa15.11■□□□□ 0.01
CHRNB1-206ENST00000574054 HERC2O95714 4834 aa15.11■□□□□ 0.01
CHRNB1-206ENST00000574054 C9orf170A2RU37 121 aa15.1■□□□□ 0.01
CHRNB1-206ENST00000574054 POLR2GP62487 172 aaKnown RBP eCLIP15.1■□□□□ 0.01
CHRNB1-206ENST00000574054 FAM222AQ5U5X8 452 aa15.1■□□□□ 0.01
CHRNB1-206ENST00000574054 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.1■□□□□ 0.01
CHRNB1-206ENST00000574054 GPR82Q96P67 336 aa15.1■□□□□ 0.01
CHRNB1-206ENST00000574054 SRRQ9GZT4 340 aa15.1■□□□□ 0.01
CHRNB1-206ENST00000574054 PSENENQ9NZ42 101 aa15.1■□□□□ 0.01
CHRNB1-206ENST00000574054 DKK2Q9UBU2 259 aa15.1■□□□□ 0.01
CHRNB1-206ENST00000574054 TEX48A0A1B0GUV7 120 aa15.09■□□□□ 0.01
CHRNB1-206ENST00000574054 LOC102723971A0A1B0GUV8 181 aa15.09■□□□□ 0.01
CHRNB1-206ENST00000574054 LINC00854A0A1B0GVQ3 168 aa15.09■□□□□ 0.01
CHRNB1-206ENST00000574054 SSSCA1O60232 199 aa15.09■□□□□ 0.01
CHRNB1-206ENST00000574054 HTN3P15516 51 aa15.09■□□□□ 0.01
CHRNB1-206ENST00000574054 FGL1Q08830 312 aa15.09■□□□□ 0.01
CHRNB1-206ENST00000574054 TMEM144Q7Z5S9 345 aa15.09■□□□□ 0.01
CHRNB1-206ENST00000574054 POM121L12Q8N7R1 296 aa15.09■□□□□ 0.01
CHRNB1-206ENST00000574054 OR4D5Q8NGN0 318 aa15.09■□□□□ 0.01
CHRNB1-206ENST00000574054 C17orf77Q96MU5 243 aa15.09■□□□□ 0.01
CHRNB1-206ENST00000574054 NIPSNAP3BQ9BS92 247 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms