RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 Q9H3A6 140 aa15.24■□□□□ 0.03
SCARF1-206ENST00000573852 P01737 135 aa15.23■□□□□ 0.03
SCARF1-206ENST00000573852 TCRAP04437 139 aa15.23■□□□□ 0.03
SCARF1-206ENST00000573852 TMEM116Q8NCL8 245 aa15.23■□□□□ 0.03
SCARF1-206ENST00000573852 FMC1Q96HJ9 113 aa15.23■□□□□ 0.03
SCARF1-206ENST00000573852 C16orf97H3BN30 126 aa15.23■□□□□ 0.03
SCARF1-206ENST00000573852 THBDP07204 575 aa15.23■□□□□ 0.03
SCARF1-206ENST00000573852 LGALS7P47929 136 aa15.23■□□□□ 0.03
SCARF1-206ENST00000573852 DLX1P56177 255 aa15.23■□□□□ 0.03
SCARF1-206ENST00000573852 IGHV1-8P0DP01 117 aa15.22■□□□□ 0.03
SCARF1-206ENST00000573852 TMEM155Q4W5P6 130 aa15.22■□□□□ 0.03
SCARF1-206ENST00000573852 LINC00173Q6ZV60 143 aa15.22■□□□□ 0.03
SCARF1-206ENST00000573852 ZNF835Q9Y2P0 537 aa15.22■□□□□ 0.03
SCARF1-206ENST00000573852 PCNX1Q96RV3 2341 aa15.22■□□□□ 0.03
SCARF1-206ENST00000573852 A0A0G2JNJ9 132 aa15.22■□□□□ 0.03
SCARF1-206ENST00000573852 RPL27AP46776 148 aaKnown RBP15.22■□□□□ 0.03
SCARF1-206ENST00000573852 OR4F17Q8NGA8 305 aa15.22■□□□□ 0.03
SCARF1-206ENST00000573852 TMEM70Q9BUB7 260 aa15.22■□□□□ 0.03
SCARF1-206ENST00000573852 ZNF492Q9P255 531 aa15.22■□□□□ 0.03
SCARF1-206ENST00000573852 Q9UFV3 132 aa15.22■□□□□ 0.03
SCARF1-206ENST00000573852 PRB3Q04118 309 aaPredicted RBP15.21■□□□□ 0.03
SCARF1-206ENST00000573852 CT83Q5H943 113 aa15.21■□□□□ 0.03
SCARF1-206ENST00000573852 UNQ5815/PRO19632Q6UWF5 114 aa15.21■□□□□ 0.03
SCARF1-206ENST00000573852 Q71RC1 249 aaPredicted RBP15.21■□□□□ 0.03
SCARF1-206ENST00000573852 TRAV8-1A0A0A6YYK1 113 aa15.21■□□□□ 0.03
SCARF1-206ENST00000573852 C20orf202A1L168 122 aa15.21■□□□□ 0.03
SCARF1-206ENST00000573852 TEX45Q8NA69 505 aa15.21■□□□□ 0.03
SCARF1-206ENST00000573852 C8orf46Q8TAG6 207 aa15.21■□□□□ 0.03
SCARF1-206ENST00000573852 C22orf15Q8WYQ4 148 aa15.21■□□□□ 0.03
SCARF1-206ENST00000573852 IGF2-ASQ6U949 168 aa15.2■□□□□ 0.02
SCARF1-206ENST00000573852 TP73-AS1Q9UF72 201 aa15.2■□□□□ 0.02
SCARF1-206ENST00000573852 IGHV1-24A0A0C4DH33 117 aa15.2■□□□□ 0.02
SCARF1-206ENST00000573852 CRYGBP07316 175 aa15.2■□□□□ 0.02
SCARF1-206ENST00000573852 MALRD1Q5VYJ5 2156 aa15.2■□□□□ 0.02
SCARF1-206ENST00000573852 RBPMS2Q6ZRY4 209 aaKnown RBP15.2■□□□□ 0.02
SCARF1-206ENST00000573852 PRSS33Q8NF86 280 aa15.2■□□□□ 0.02
SCARF1-206ENST00000573852 ORAOV1Q8WV07 137 aa15.2■□□□□ 0.02
SCARF1-206ENST00000573852 DAZAP1Q96EP5 407 aaKnown RBP15.2■□□□□ 0.02
SCARF1-206ENST00000573852 SOX21Q9Y651 276 aaPredicted RBP15.2■□□□□ 0.02
SCARF1-206ENST00000573852 ZGRF1Q86YA3 2104 aa15.19■□□□□ 0.02
SCARF1-206ENST00000573852 PLP1P60201 277 aa15.19■□□□□ 0.02
SCARF1-206ENST00000573852 CIARTQ8N365 385 aaPredicted RBP15.19■□□□□ 0.02
SCARF1-206ENST00000573852 TMEM133Q9H2Q1 129 aa15.19■□□□□ 0.02
SCARF1-206ENST00000573852 BSNQ9UPA5 3926 aa15.19■□□□□ 0.02
SCARF1-206ENST00000573852 OR4C46A6NHA9 309 aa15.19■□□□□ 0.02
SCARF1-206ENST00000573852 CCL25O15444 150 aa15.19■□□□□ 0.02
SCARF1-206ENST00000573852 SIGLEC9Q9Y336 463 aa15.19■□□□□ 0.02
SCARF1-206ENST00000573852 AKAP13Q12802 2813 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 CRXO43186 299 aaPredicted RBP15.18■□□□□ 0.02
SCARF1-206ENST00000573852 ANKRD39Q53RE8 183 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 ASCL5Q7RTU5 278 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 MUC15Q8N387 334 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 GFRA4Q9GZZ7 299 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 HIGD1AQ9Y241 93 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 ZZEF1O43149 2961 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 TOX4O94842 621 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 PSG1P11464 419 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 LYZP61626 148 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 FAM162BQ5T6X4 162 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 Q86TA4 180 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 EXOC3-AS1Q8N2X6 119 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 RNASE6Q93091 150 aaKnown RBP15.18■□□□□ 0.02
SCARF1-206ENST00000573852 CHCHD1Q96BP2 118 aaKnown RBP15.18■□□□□ 0.02
SCARF1-206ENST00000573852 ATMQ13315 3056 aa15.18■□□□□ 0.02
SCARF1-206ENST00000573852 NPIPB6E9PJ23 425 aa15.17■□□□□ 0.02
SCARF1-206ENST00000573852 KAAG1Q9UBP8 84 aa15.17■□□□□ 0.02
SCARF1-206ENST00000573852 F11RQ9Y624 299 aaKnown RBP15.17■□□□□ 0.02
SCARF1-206ENST00000573852 TTC28Q96AY4 2481 aa15.17■□□□□ 0.02
SCARF1-206ENST00000573852 LOC102724200A0A096LPH7 203 aaPredicted RBP15.17■□□□□ 0.02
SCARF1-206ENST00000573852 TEX22C9J3V5 150 aa15.17■□□□□ 0.02
SCARF1-206ENST00000573852 SYS1-DBNDD2H3BUS1 97 aa15.17■□□□□ 0.02
SCARF1-206ENST00000573852 IGLV2-11P01706 119 aa15.17■□□□□ 0.02
SCARF1-206ENST00000573852 COX11Q9Y6N1 276 aa15.17■□□□□ 0.02
SCARF1-206ENST00000573852 COL8A1P27658 744 aa15.16■□□□□ 0.02
SCARF1-206ENST00000573852 ZNF138P52744 262 aa15.16■□□□□ 0.02
SCARF1-206ENST00000573852 OTORQ9NRC9 128 aa15.16■□□□□ 0.02
SCARF1-206ENST00000573852 LEPROTL1O95214 131 aa15.16■□□□□ 0.02
SCARF1-206ENST00000573852 IGLC1P0CG04 106 aa15.16■□□□□ 0.02
SCARF1-206ENST00000573852 GOLT1AQ6ZVE7 132 aa15.16■□□□□ 0.02
SCARF1-206ENST00000573852 PRNTQ86SH4 94 aa15.16■□□□□ 0.02
SCARF1-206ENST00000573852 SLC25A39Q9BZJ4 359 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-206ENST00000573852 C1RLQ9NZP8 487 aa15.16■□□□□ 0.02
SCARF1-206ENST00000573852 SH3BGRL2Q9UJC5 107 aa15.16■□□□□ 0.02
SCARF1-206ENST00000573852 hDV102S1A0JD36 115 aa15.15■□□□□ 0.02
SCARF1-206ENST00000573852 OVOL3O00110 214 aa15.15■□□□□ 0.02
SCARF1-206ENST00000573852 CHEK1O14757 476 aa15.15■□□□□ 0.02
SCARF1-206ENST00000573852 APOHP02749 345 aaPredicted RBP15.15■□□□□ 0.02
SCARF1-206ENST00000573852 PTTG1IPP53801 180 aa15.15■□□□□ 0.02
SCARF1-206ENST00000573852 RNASE8Q8TDE3 154 aaKnown RBP15.15■□□□□ 0.02
SCARF1-206ENST00000573852 NDFIP1Q9BT67 221 aa15.15■□□□□ 0.02
SCARF1-206ENST00000573852 IGHV1-69-2A0A0G2JMI3 117 aa15.15■□□□□ 0.02
SCARF1-206ENST00000573852 ZNF785A8K8V0 405 aa15.15■□□□□ 0.02
SCARF1-206ENST00000573852 PPP1R27Q86WC6 154 aa15.15■□□□□ 0.02
SCARF1-206ENST00000573852 FAM231BA6NCW3 169 aa15.14■□□□□ 0.01
SCARF1-206ENST00000573852 PRB4P10163 310 aaPredicted RBP15.14■□□□□ 0.01
SCARF1-206ENST00000573852 PAX2Q02962 417 aa15.14■□□□□ 0.01
SCARF1-206ENST00000573852 INSIG2Q9Y5U4 225 aa15.14■□□□□ 0.01
SCARF1-206ENST00000573852 TACC2O95359 2948 aa15.14■□□□□ 0.01
SCARF1-206ENST00000573852 IGHV1-3A0A0C4DH29 117 aa15.14■□□□□ 0.01
SCARF1-206ENST00000573852 IGLV1-47P01700 117 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms