RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 SIRPDQ9H106 197 aa11.11□□□□□ -0.63
TVP23A-207ENST00000573360 NBR2O15453 112 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 SERF1AO75920 110 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 AVPP01185 164 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 OR5B3Q8NH48 314 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 SGK494Q96LW2 274 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 RBP4P02753 201 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 OR5G3P0C626 314 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 SLC35E1Q96K37 410 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 ORM2P19652 201 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 TAS2R60P59551 318 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 SSBP2P81877 361 aaPredicted RBP11.1□□□□□ -0.63
TVP23A-207ENST00000573360 CCDC144NLQ6NUI1 221 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 TMEM167AQ8TBQ9 72 aa11.1□□□□□ -0.63
TVP23A-207ENST00000573360 RNASEH2CQ8TDP1 164 aaKnown RBP11.1□□□□□ -0.63
TVP23A-207ENST00000573360 RPL19P84098 196 aaKnown RBP11.09□□□□□ -0.63
TVP23A-207ENST00000573360 SIGLECL1Q8N7X8 197 aa11.09□□□□□ -0.63
TVP23A-207ENST00000573360 OR11H6Q8NGC7 330 aa11.09□□□□□ -0.63
TVP23A-207ENST00000573360 SLC45A2Q9UMX9 530 aa11.09□□□□□ -0.63
TVP23A-207ENST00000573360 NF1P21359 2839 aa11.09□□□□□ -0.63
TVP23A-207ENST00000573360 WFDC11Q8NEX6 87 aa11.09□□□□□ -0.63
TVP23A-207ENST00000573360 CA1P00915 261 aaPredicted RBP11.08□□□□□ -0.63
TVP23A-207ENST00000573360 FAM106CPP0CH98 169 aa11.08□□□□□ -0.63
TVP23A-207ENST00000573360 BRS3P32247 399 aa11.08□□□□□ -0.63
TVP23A-207ENST00000573360 RPL15P61313 204 aaKnown RBP11.08□□□□□ -0.63
TVP23A-207ENST00000573360 CX3CL1P78423 397 aa11.08□□□□□ -0.63
TVP23A-207ENST00000573360 FOXL1Q12952 345 aa11.08□□□□□ -0.63
TVP23A-207ENST00000573360 SLC25A33Q9BSK2 321 aa11.08□□□□□ -0.63
TVP23A-207ENST00000573360 IL36BQ9NZH7 164 aa11.08□□□□□ -0.63
TVP23A-207ENST00000573360 F2Z2F3 143 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 TYMSP04818 313 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 AMTP48728 403 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 SSTP61278 116 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 OR5AU1Q8NGC0 362 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 RASL11BQ9BPW5 248 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 TECRQ9NZ01 308 aaKnown RBP11.08□□□□□ -0.64
TVP23A-207ENST00000573360 B4DSR2 109 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 H3BTX0 84 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 H3BUX3 64 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 K7EN84 100 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 RNASE2P10153 161 aaKnown RBP11.08□□□□□ -0.64
TVP23A-207ENST00000573360 COA6Q5JTJ3 125 aaKnown RBP11.08□□□□□ -0.64
TVP23A-207ENST00000573360 CYB5R2Q6BCY4 276 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 WNT10AQ9GZT5 417 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 NDUFA4L2Q9NRX3 87 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 MXRA5Q9NR99 2828 aa11.08□□□□□ -0.64
TVP23A-207ENST00000573360 TRAV5A0A0B4J249 113 aa11.07□□□□□ -0.64
TVP23A-207ENST00000573360 ZNF253O75346 499 aa11.07□□□□□ -0.64
TVP23A-207ENST00000573360 UBE2E1P51965 193 aa11.07□□□□□ -0.64
TVP23A-207ENST00000573360 SUB1P53999 127 aaKnown RBP eCLIP11.07□□□□□ -0.64
TVP23A-207ENST00000573360 UBE2L3P68036 154 aaKnown RBP11.07□□□□□ -0.64
TVP23A-207ENST00000573360 BCL6BQ8N143 479 aaPredicted RBP11.07□□□□□ -0.64
TVP23A-207ENST00000573360 CUBNO60494 3623 aa11.07□□□□□ -0.64
TVP23A-207ENST00000573360 M0R143 59 aa11.07□□□□□ -0.64
TVP23A-207ENST00000573360 CD99P14209 185 aa11.07□□□□□ -0.64
TVP23A-207ENST00000573360 MRPL36Q9P0J6 103 aaKnown RBP11.07□□□□□ -0.64
TVP23A-207ENST00000573360 A0A1W2PN81 502 aa11.07□□□□□ -0.64
TVP23A-207ENST00000573360 LINC01548A6NM66 108 aa11.07□□□□□ -0.64
TVP23A-207ENST00000573360 TAS2R45P59539 299 aa11.07□□□□□ -0.64
TVP23A-207ENST00000573360 DEFB113Q30KQ7 82 aa11.07□□□□□ -0.64
TVP23A-207ENST00000573360 FNDC4Q9H6D8 234 aaPredicted RBP11.07□□□□□ -0.64
TVP23A-207ENST00000573360 POLR3KQ9Y2Y1 108 aaPredicted RBP11.07□□□□□ -0.64
TVP23A-207ENST00000573360 TIMM8BQ9Y5J9 83 aaPredicted RBP11.07□□□□□ -0.64
TVP23A-207ENST00000573360 TRAV34A0A0B4J273 112 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 G3V318 75 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 OR52E5Q8NH55 327 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 TXNDC17Q9BRA2 123 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 VAMP8Q9BV40 100 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 OR2J3O76001 311 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 TDRG1Q3Y452 100 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 Q71RC1 249 aaPredicted RBP11.06□□□□□ -0.64
TVP23A-207ENST00000573360 LINC00479Q96M42 142 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 TMEM167BQ9NRX6 74 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 CGB1A6NKQ9 187 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 C5orf64Q2M2E5 130 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 CIARTQ8N365 385 aaPredicted RBP11.06□□□□□ -0.64
TVP23A-207ENST00000573360 BLNKQ8WV28 456 aa11.06□□□□□ -0.64
TVP23A-207ENST00000573360 COX7A2P2O60397 106 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 ZNF137PP52743 207 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 NDPQ00604 133 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 UNQ5815/PRO19632Q6UWF5 114 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 LCNL1Q6ZST4 164 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 TMEM144Q7Z5S9 345 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 TEX45Q8NA69 505 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 ZNF331Q9NQX6 463 aaPredicted RBP11.05□□□□□ -0.64
TVP23A-207ENST00000573360 LY6LH3BQJ8 138 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 ZNF25P17030 456 aaPredicted RBP11.05□□□□□ -0.64
TVP23A-207ENST00000573360 COMPP49747 757 aaPredicted RBP11.05□□□□□ -0.64
TVP23A-207ENST00000573360 POU2AF1Q16633 256 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 LEMD1Q68G75 181 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 GNB4Q9HAV0 340 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 TEP1Q99973 2627 aaKnown RBP11.05□□□□□ -0.64
TVP23A-207ENST00000573360 IGHV1-69DA0A0B4J2H0 117 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 NDUFS8O00217 210 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 IGHV1-69P01742 117 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 CAMPP49913 170 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 PAX2Q02962 417 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 DNLZQ5SXM8 178 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 OR1B1Q8NGR6 318 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms