RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 P2RY1P47900 373 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 EIF2B2P49770 351 aaKnown RBP5.47□□□□□ -1.53
NUP88-205ENST00000572809 AP2S1P53680 142 aaPredicted RBP5.47□□□□□ -1.53
NUP88-205ENST00000572809 DEFB131AP59861 70 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 RAB11AP62491 216 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 PPP1R1AQ13522 171 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 DEFB135Q30KP9 77 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 TRIQKQ629K1 86 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 STXBP6Q8NFX7 210 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 C8orf49Q96NF6 230 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 NDUFA13Q9P0J0 144 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 DKK2Q9UBU2 259 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 A0A0J9YWU9 116 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 LCE6AA0A183 80 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 LINC00854A0A1B0GVQ3 168 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 C9orf170A2RU37 121 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 HELTA6NFD8 242 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 CENPXA8MT69 81 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 K7EQG2 157 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 SYNGR2O43760 224 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 NDUFB6O95139 128 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 TOMM40O96008 361 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 IL4P05112 153 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 IAPPP10997 89 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 PSG1P11464 419 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 UBE2MP61081 183 aaKnown RBP5.46□□□□□ -1.54
NUP88-205ENST00000572809 RPP30P78346 268 aaKnown RBP5.46□□□□□ -1.54
NUP88-205ENST00000572809 GAMTQ14353 236 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 USF2Q15853 346 aaPredicted RBP5.46□□□□□ -1.54
NUP88-205ENST00000572809 GGNBP1Q5YKI7 109 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 LEMD1Q68G75 181 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 C16orf54Q6UWD8 224 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 LYG2Q86SG7 212 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 FAM24BQ8N5W8 94 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 SLC35E1Q96K37 410 aa5.46□□□□□ -1.54
NUP88-205ENST00000572809 SDHCQ99643 169 aaPredicted RBP5.46□□□□□ -1.54
NUP88-205ENST00000572809 PAIP2BQ9ULR5 123 aaKnown RBP5.46□□□□□ -1.54
NUP88-205ENST00000572809 ZFP92A6NM28 416 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 SNRPGP15A8MWD9 76 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 WRBO00258 174 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 BUB3O43684 328 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 OR4E1P0C645 316 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 ZNF90Q03938 601 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 DHRS2Q13268 280 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 STHQ8IWL8 128 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 OR51G1Q8NGK1 321 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 DCANP1Q8TF63 244 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 GATAD1Q8WUU5 269 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 GLMPQ8WWB7 406 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 CIB3Q96Q77 187 aaPredicted RBP5.45□□□□□ -1.54
NUP88-205ENST00000572809 RARRES2Q99969 163 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 C7orf50Q9BRJ6 194 aaKnown RBP5.45□□□□□ -1.54
NUP88-205ENST00000572809 MAGT1Q9H0U3 335 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 FLVCR2Q9UPI3 526 aa5.45□□□□□ -1.54
NUP88-205ENST00000572809 KMT2CQ8NEZ4 4911 aaKnown RBP5.45□□□□□ -1.54
NUP88-205ENST00000572809 TENM2Q9NT68 2774 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 IGKV1D-37A0A075B6S9 117 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 ADAP1O75689 374 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 CA1P00915 261 aaPredicted RBP5.44□□□□□ -1.54
NUP88-205ENST00000572809 IFNA21P01568 189 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 FABP1P07148 127 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 ZNF688P0C7X2 276 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 IL7P13232 177 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 SUMO2P61956 95 aaKnown RBP5.44□□□□□ -1.54
NUP88-205ENST00000572809 EWSR1Q01844 656 aaKnown RBP eCLIP5.44□□□□□ -1.54
NUP88-205ENST00000572809 CNPY1Q3B7I2 92 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 SPANXN5Q5MJ07 72 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 SIGLEC15Q6ZMC9 328 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 Q8N1X5 172 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 TMEM217Q8N7C4 229 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 OR11H2Q8NH07 326 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 COQ8AQ8NI60 647 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 RNF125Q96EQ8 232 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 TRGV9Q99603 122 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 PBDC1Q9BVG4 233 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 DNAH7Q8WXX0 4024 aa5.44□□□□□ -1.54
NUP88-205ENST00000572809 CXorf65A6NEN9 183 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 KNCNA6PVL3 124 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 PLA2G10O15496 165 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 JTBO76095 146 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 ANXA7P20073 488 aaKnown RBP5.43□□□□□ -1.54
NUP88-205ENST00000572809 BTCP35070 178 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 NKX2-1P43699 371 aaPredicted RBP5.43□□□□□ -1.54
NUP88-205ENST00000572809 SNRPD3P62318 126 aaKnown RBP5.43□□□□□ -1.54
NUP88-205ENST00000572809 POLR2GP62487 172 aaKnown RBP eCLIP5.43□□□□□ -1.54
NUP88-205ENST00000572809 BLOC1S1P78537 153 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 OR2F1Q13607 317 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 PSMG4Q5JS54 123 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 ACTL10Q5JWF8 245 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 OR8G2PQ6IF36 304 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 MORN3Q6PF18 240 aaPredicted RBP5.43□□□□□ -1.54
NUP88-205ENST00000572809 TRPT1Q86TN4 253 aaKnown RBP5.43□□□□□ -1.54
NUP88-205ENST00000572809 THAP8Q8NA92 274 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 RAB40CQ96S21 281 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 NRN1Q9NPD7 142 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 PSENENQ9NZ42 101 aa5.43□□□□□ -1.54
NUP88-205ENST00000572809 STRAPQ9Y3F4 350 aaKnown RBP5.43□□□□□ -1.54
NUP88-205ENST00000572809 CSMD3Q7Z407 3707 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 IGKV1OR2-108A0A075B7D4 117 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 PRSS46E5RG02 174 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms