RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 OR52E5Q8NH55 327 aa6.74□□□□□ -1.33
CIITA-208ENST00000572665 TERB2Q8NHR7 220 aa6.74□□□□□ -1.33
CIITA-208ENST00000572665 MCFD2Q8NI22 146 aa6.74□□□□□ -1.33
CIITA-208ENST00000572665 Q8WTZ3 238 aa6.74□□□□□ -1.33
CIITA-208ENST00000572665 TMED6Q8WW62 240 aa6.74□□□□□ -1.33
CIITA-208ENST00000572665 ABHD1Q96SE0 405 aa6.74□□□□□ -1.33
CIITA-208ENST00000572665 C1QTNF4Q9BXJ3 329 aa6.74□□□□□ -1.33
CIITA-208ENST00000572665 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.74□□□□□ -1.33
CIITA-208ENST00000572665 EXTL2Q9UBQ6 330 aa6.74□□□□□ -1.33
CIITA-208ENST00000572665 A0A0B4J293 547 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 PIGBOS1A0A0B4J2F0 54 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 GSTZ1O43708 216 aaPredicted RBP6.73□□□□□ -1.33
CIITA-208ENST00000572665 RNASE2P10153 161 aaKnown RBP6.73□□□□□ -1.33
CIITA-208ENST00000572665 UCP1P25874 307 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 NUP62P37198 522 aaPredicted RBP6.73□□□□□ -1.33
CIITA-208ENST00000572665 ETV6P41212 452 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 P2RY1P47900 373 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 SPCS3P61009 180 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 MRPS10P82664 201 aaKnown RBP6.73□□□□□ -1.33
CIITA-208ENST00000572665 DHODHQ02127 395 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 MEF2DQ14814 521 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 SPINK9Q5DT21 86 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 PVRIGQ6DKI7 326 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 CCDC190Q86UF4 302 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 LHFPL1Q86WI0 220 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 TMEM229BQ8NBD8 167 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 OR1S2Q8NGQ3 325 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 TP53RKQ96S44 253 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 SOSTQ9BQB4 213 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 RABL2AQ9UBK7 228 aaPredicted RBP6.73□□□□□ -1.33
CIITA-208ENST00000572665 MTFP1Q9UDX5 166 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 RABL2BQ9UNT1 228 aa6.73□□□□□ -1.33
CIITA-208ENST00000572665 IGHV3-66A0A0C4DH42 116 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 TEX13DA0A0J9YY54 714 aaPredicted RBP6.72□□□□□ -1.33
CIITA-208ENST00000572665 A0A1B0GU03 582 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 DISC1C4P0D8 188 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 FAM90A26D6RGX4 464 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 K7EQG2 157 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 CTDSPLO15194 276 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 RAB3DO95716 219 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 IGKV1-5P01602 117 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 APOHP02749 345 aaPredicted RBP6.72□□□□□ -1.33
CIITA-208ENST00000572665 CD3DP04234 171 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 P0C879 139 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 PPP5CP53041 499 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 SNRPD3P62318 126 aaKnown RBP6.72□□□□□ -1.33
CIITA-208ENST00000572665 SURF2Q15527 256 aaPredicted RBP6.72□□□□□ -1.33
CIITA-208ENST00000572665 SCGB2B2Q4G0G5 96 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 TRPT1Q86TN4 253 aaKnown RBP6.72□□□□□ -1.33
CIITA-208ENST00000572665 RPP25LQ8N5L8 163 aaKnown RBP6.72□□□□□ -1.33
CIITA-208ENST00000572665 RNASEH2CQ8TDP1 164 aaKnown RBP6.72□□□□□ -1.33
CIITA-208ENST00000572665 KLK11Q9UBX7 282 aa6.72□□□□□ -1.33
CIITA-208ENST00000572665 ALMS1Q8TCU4 4167 aa6.71□□□□□ -1.33
CIITA-208ENST00000572665 TRAV10A0A0B4J240 114 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 CEBPZOSA8MTT3 80 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 IGLL5B9A064 214 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 GABARAPH6UMI1 98 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 DEDDO75618 318 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 CDS2O95674 445 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 CD74P04233 296 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 ZNF688P0C7X2 276 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 YPEL3P61236 119 aaPredicted RBP6.71□□□□□ -1.34
CIITA-208ENST00000572665 DHRS2Q13268 280 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 IZUMO4Q1ZYL8 232 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 C2orf83Q53S99 150 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 STEAP1BQ6NZ63 245 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 FAM122CQ6P4D5 195 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 SLC24A4Q8NFF2 622 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 OR13C8Q8NGS7 320 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 OR52I2Q8NH67 350 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 SMIM4Q8WVI0 70 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 RBPMSQ93062 196 aaKnown RBP6.71□□□□□ -1.34
CIITA-208ENST00000572665 DIRAS2Q96HU8 199 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 ZNF479Q96JC4 524 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 SCGB3A2Q96PL1 93 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 TMEM222Q9H0R3 208 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 BATF3Q9NR55 127 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 TBC1D24Q9ULP9 559 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 KCNIP3Q9Y2W7 256 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 V9GYH0 126 aa6.71□□□□□ -1.34
CIITA-208ENST00000572665 BIRC6Q9NR09 4857 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 IGLV5-37A0A075B6J1 123 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 ZNF705EA8MWA4 302 aaPredicted RBP6.7□□□□□ -1.34
CIITA-208ENST00000572665 OR5AC1P0C628 307 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 NPY1RP25929 384 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 OR10J1P30954 320 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 BSXQ3C1V8 233 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 SP6Q3SY56 376 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 TIGITQ495A1 244 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 AARDQ4LEZ3 155 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 ACTL10Q5JWF8 245 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 Q8N9P0 234 aaPredicted RBP6.7□□□□□ -1.34
CIITA-208ENST00000572665 Q8NAQ8 132 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 MARCH1Q8TCQ1 289 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 DCANP1Q8TF63 244 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 PRRT1Q99946 306 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 NAA60Q9H7X0 242 aa6.7□□□□□ -1.34
CIITA-208ENST00000572665 EPPK1P58107 5090 aaKnown RBP6.7□□□□□ -1.34
CIITA-208ENST00000572665 HYDINQ4G0P3 5121 aa6.69□□□□□ -1.34
CIITA-208ENST00000572665 FABP12A6NFH5 140 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms