RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 LAMTOR1Q6IAA8 161 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 C18orf65Q6ZTR6 163 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 TMED6Q8WW62 240 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 TMEM190Q8WZ59 177 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 PHYHIPLQ96FC7 376 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 GRAMD2BQ96HH9 432 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 DUX3Q96PT4 197 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 METTL26Q96S19 204 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 RNF2Q99496 336 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 CITED1Q99966 193 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 TMEM231Q9H6L2 316 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 DAZ1Q9NQZ3 744 aaKnown RBP5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 CYTL1Q9NRR1 136 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 RABAC1Q9UI14 185 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 HIGD1AQ9Y241 93 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 IGHV3OR16-8A0A075B7F1 116 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 A0A1W2PPV4 95 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 UMAD1C9J7I0 102 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 HYPMO75409 117 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 SEC11BP0C7V7 166 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 SPP1P10451 314 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 M6PRP20645 277 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 NPPCP23582 126 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 GATA2P23769 480 aaPredicted RBP5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 MYCNOSP40205 109 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 CDC34P49427 236 aaPredicted RBP5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 RAB5CP51148 216 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 SLURP1P55000 103 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 SYNJ2BPP57105 145 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 TAS2R45P59539 299 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 RHOBP62745 196 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 KIAA0141Q14154 515 aaPredicted RBP5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 TMEM41BQ5BJD5 291 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 C10orf113Q5VZT2 155 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 HIST2H2BDQ6DRA6 164 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 FAM122CQ6P4D5 195 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 ALKAL2Q6UX46 152 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 DYNLRB2Q8TF09 96 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 ZNF747Q9BV97 191 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 ELOVL1Q9BW60 279 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 MRPL32Q9BYC8 188 aaKnown RBP5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 ARV1Q9H2C2 271 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 SLC45A2Q9UMX9 530 aa5.06□□□□□ -1.6
CTDNEP1-204ENST00000570484 A0A1W2PS18 150 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 A8MWP6 167 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 TEX46H3BTG2 121 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 OVOL1O14753 267 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 KRTAP10-3P60369 221 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 RAB2AP61019 212 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 FHL3Q13643 280 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 USF2Q15853 346 aaPredicted RBP5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 KHDC3LQ587J8 217 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 FAM78BQ5VT40 261 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 TOMM20LQ6UXN7 152 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 DPPA3Q6W0C5 159 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 LINC00305Q7Z4B0 112 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 GPHB5Q86YW7 130 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 IQCF2Q8IXL9 164 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 Q8N1Y9 231 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR10G4Q8NGN3 311 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR10G9Q8NGN4 311 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR10G7Q8NGN6 311 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 FAM213BQ8TBF2 198 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 GATAD1Q8WUU5 269 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 RAX2Q96IS3 184 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 ACTR3CQ9C0K3 210 aaPredicted RBP5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 SLC25A22Q9H936 323 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 UBQLN2Q9UHD9 624 aa5.05□□□□□ -1.6
CTDNEP1-204ENST00000570484 MXRA5Q9NR99 2828 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 WI2-2373I1.2A0A1W2PRP0 233 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 ZNF705EA8MWA4 302 aaPredicted RBP5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 H3BRN7 92 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 LGALS9O00182 355 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 ZNF207O43670 478 aaKnown RBP5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR7C2O60412 319 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 SAP30O75446 220 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 GALR1P47211 349 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 PLP1P60201 277 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 RAB14P61106 215 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 SUMO1P63165 101 aaKnown RBP5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 GCSAMLQ5JQS6 135 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 FAM74A1Q5RGS3 127 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 TEX261Q6UWH6 196 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 UNQ9165/PRO28630Q6UXU0 137 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 STXBP6Q8NFX7 210 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR9G4Q8NGQ1 327 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 LRRC20Q8TCA0 184 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 MARC2Q969Z3 335 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 UHRF2Q96PU4 802 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 SCRT1Q9BWW7 348 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 SLC25A39Q9BZJ4 359 aaPredicted RBP5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 CDIP1Q9H305 208 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 DNAJC4Q9NNZ3 241 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 TECRQ9NZ01 308 aaKnown RBP5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 FUT9Q9Y231 359 aa5.04□□□□□ -1.6
CTDNEP1-204ENST00000570484 IGHV3-49A0A0A0MS15 119 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 IGHV3-66A0A0C4DH42 116 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 IGHV7-4-1A0A0J9YVY3 117 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 CTXND1A0A1B0GTU2 59 aa5.03□□□□□ -1.6
CTDNEP1-204ENST00000570484 MAP1LC3B2A6NCE7 125 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms