RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 LOC102723971A0A1B0GUV8 181 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 ANKRD20A5PA0PJZ0 165 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 TMEM189A5PLL7 270 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 SMIM9A6NGZ8 99 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 SNRPGP15A8MWD9 76 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 CTDSPLO15194 276 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 HBE1P02100 147 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 PRB4P10163 310 aaPredicted RBP6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 GATA2P23769 480 aaPredicted RBP6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 PSMB3P49720 205 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 PSG9Q00887 426 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 IGFL4Q6B9Z1 124 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 OR8G2PQ6IF36 304 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 EBLN2Q6P2I7 272 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 TMED4Q7Z7H5 227 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 C16orf92Q96LL3 132 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 MAGT1Q9H0U3 335 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 SLC25A22Q9H936 323 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 PFDN2Q9UHV9 154 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 SCP2D1Q9UJQ7 156 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 GOLT1BQ9Y3E0 138 aa6.12□□□□□ -1.43
CTDNEP1-203ENST00000570385 NACAE9PAV3 2078 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 IGKV1OR2-108A0A075B7D4 117 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 MED14OSP0DP75 135 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 GPX4P36969 197 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 NUP62P37198 522 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 ALDH3B2P48448 385 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 ZNF79Q15937 498 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 LGALS9BQ3B8N2 356 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 TMEM88Q6PEY1 159 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 TMEM182Q6ZP80 229 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 ZNF575Q86XF7 245 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 SCGB3A2Q96PL1 93 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 TMEM208Q9BTX3 173 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 RSG1Q9BU20 258 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 SLC25A32Q9H2D1 315 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 CACFD1Q9UGQ2 172 aa6.11□□□□□ -1.43
CTDNEP1-203ENST00000570385 A0A0J9YX75 114 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 FABP12A6NFH5 140 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 ZNF705GA8MUZ8 300 aaPredicted RBP6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 WRBO00258 174 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 ISLRO14498 428 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 FABP1P07148 127 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 ANXA3P12429 323 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 ORM2P19652 201 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 VAMP1P23763 118 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 DAD1P61803 113 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 RAB11AP62491 216 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 FGL1Q08830 312 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 RRN3P1Q2M238 152 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 C1orf194Q5T5A4 169 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 Q6ZR54 194 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 RNF182Q8N6D2 247 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 DYNC2LI1Q8TCX1 351 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 C17orf77Q96MU5 243 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 TRGV9Q99603 122 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 MRPS26Q9BYN8 205 aaKnown RBP6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 RPRMQ9NS64 109 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 DOK5Q9P104 306 aa6.1□□□□□ -1.43
CTDNEP1-203ENST00000570385 ZNF98A6NK75 572 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 H3BP45 60 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 M0R2Z0 102 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 PITX3O75364 302 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 HOXB5P09067 269 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 DEFB130BP0DP73 79 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 DEFB130AP0DP74 79 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 TNFSF8P32971 234 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 GALR1P47211 349 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 CNN1P51911 297 aaKnown RBP6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 PAX9P55771 341 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 ATP5IP56385 69 aaPredicted RBP6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 SRPXP78539 464 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 FCN2Q15485 313 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 SPINK13Q1W4C9 94 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 AMTNQ6UX39 209 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 THAP8Q8NA92 274 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 OR1B1Q8NGR6 318 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 CLUHP3Q96NS8 147 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 CCDC59Q9P031 241 aaKnown RBP6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 RSL24D1Q9UHA3 163 aaKnown RBP6.09□□□□□ -1.43
CTDNEP1-203ENST00000570385 RYR1P21817 5038 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 TRAV12-2A0A075B6T6 113 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 TEX48A0A1B0GUV7 120 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 SMCO3A2RU48 225 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 AKR1C1Q04828 323 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 SPANXN5Q5MJ07 72 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 C1orf134Q5TEV5 83 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 SPATA31B1PQ5VZV4 182 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 GGNBP1Q5YKI7 109 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 BAP18Q8IXM2 172 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 OR11H7Q8NGC8 314 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 RAB2BQ8WUD1 216 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 FAM210BQ96KR6 192 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 IGF2BP2-AS1Q96M15 143 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 SOSTQ9BQB4 213 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 TMEM147Q9BVK8 224 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 KRTAP3-3Q9BYR6 98 aa6.08□□□□□ -1.44
CTDNEP1-203ENST00000570385 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms