RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 SEC22CQ9BRL7 303 aa14.66□□□□□ -0.06
ABCA3-206ENST00000569062 C11orf68Q9H3H3 251 aaKnown RBP14.66□□□□□ -0.06
ABCA3-206ENST00000569062 NUDT15Q9NV35 164 aa14.66□□□□□ -0.06
ABCA3-206ENST00000569062 CLEC5AQ9NY25 188 aa14.66□□□□□ -0.06
ABCA3-206ENST00000569062 FBXL17Q9UF56 701 aa14.66□□□□□ -0.06
ABCA3-206ENST00000569062 RCL1Q9Y2P8 373 aaKnown RBP14.66□□□□□ -0.06
ABCA3-206ENST00000569062 NUPR2A6NF83 97 aa14.65□□□□□ -0.06
ABCA3-206ENST00000569062 CFDP00746 253 aaPredicted RBP14.65□□□□□ -0.06
ABCA3-206ENST00000569062 METTL15P1P0C7V9 234 aa14.65□□□□□ -0.06
ABCA3-206ENST00000569062 ORM2P19652 201 aa14.65□□□□□ -0.06
ABCA3-206ENST00000569062 DEFB1P60022 68 aa14.65□□□□□ -0.06
ABCA3-206ENST00000569062 RRAS2P62070 204 aaPredicted RBP14.65□□□□□ -0.06
ABCA3-206ENST00000569062 TMEM41BQ5BJD5 291 aa14.65□□□□□ -0.06
ABCA3-206ENST00000569062 CEMP1Q6PRD7 247 aaPredicted RBP14.65□□□□□ -0.06
ABCA3-206ENST00000569062 TMEM14EPQ6UXP3 125 aa14.65□□□□□ -0.06
ABCA3-206ENST00000569062 OR8I2Q8N0Y5 310 aa14.65□□□□□ -0.06
ABCA3-206ENST00000569062 BPIFCQ8NFQ6 507 aa14.65□□□□□ -0.06
ABCA3-206ENST00000569062 H3BMM0 161 aa14.64□□□□□ -0.07
ABCA3-206ENST00000569062 SOCS3O14543 225 aa14.64□□□□□ -0.07
ABCA3-206ENST00000569062 MBPP02686 304 aaPredicted RBP14.64□□□□□ -0.07
ABCA3-206ENST00000569062 GDF5OSQ5U4N7 250 aa14.64□□□□□ -0.07
ABCA3-206ENST00000569062 LINC00299Q6ZSB3 139 aa14.64□□□□□ -0.07
ABCA3-206ENST00000569062 CSNK1G2-AS1Q8NCQ2 148 aa14.64□□□□□ -0.07
ABCA3-206ENST00000569062 LINC00052Q96N35 136 aa14.64□□□□□ -0.07
ABCA3-206ENST00000569062 SLC25A22Q9H936 323 aa14.64□□□□□ -0.07
ABCA3-206ENST00000569062 ZNF98A6NK75 572 aa14.63□□□□□ -0.07
ABCA3-206ENST00000569062 NANOS2P60321 138 aaKnown RBP14.63□□□□□ -0.07
ABCA3-206ENST00000569062 CYP2G1PQ6ZSU1 146 aa14.63□□□□□ -0.07
ABCA3-206ENST00000569062 Q8NAQ8 132 aa14.63□□□□□ -0.07
ABCA3-206ENST00000569062 OR1B1Q8NGR6 318 aa14.63□□□□□ -0.07
ABCA3-206ENST00000569062 ZNF431Q8TF32 576 aaPredicted RBP14.63□□□□□ -0.07
ABCA3-206ENST00000569062 SLC25A32Q9H2D1 315 aa14.63□□□□□ -0.07
ABCA3-206ENST00000569062 TBC1D24Q9ULP9 559 aa14.63□□□□□ -0.07
ABCA3-206ENST00000569062 SLC45A2Q9UMX9 530 aa14.63□□□□□ -0.07
ABCA3-206ENST00000569062 C7orf66A4D0T2 115 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 A6NHS1 94 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 ZNF705EA8MWA4 302 aaPredicted RBP14.62□□□□□ -0.07
ABCA3-206ENST00000569062 TSC22D2O75157 780 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 H2AFB2P0C5Z0 115 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 HLA-DRB4P13762 266 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 ID1P41134 155 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 PSMB3P49720 205 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 TAS2R30P59541 319 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 DLK1P80370 383 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 C11orf45Q8TAV5 145 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 PHLDA1Q8WV24 401 aaPredicted RBP14.62□□□□□ -0.07
ABCA3-206ENST00000569062 C17orf77Q96MU5 243 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 DOK5Q9P104 306 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 HLA-DRB4X5D2U9 266 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 X6R8D5 127 aa14.62□□□□□ -0.07
ABCA3-206ENST00000569062 IGHV4-28A0A0C4DH34 117 aa14.61□□□□□ -0.07
ABCA3-206ENST00000569062 FAM25EA8MYX2 175 aa14.61□□□□□ -0.07
ABCA3-206ENST00000569062 IL5P05113 134 aa14.61□□□□□ -0.07
ABCA3-206ENST00000569062 RBMY1A1P0DJD3 496 aaKnown RBP14.61□□□□□ -0.07
ABCA3-206ENST00000569062 RBMY1CP0DJD4 496 aa14.61□□□□□ -0.07
ABCA3-206ENST00000569062 ARL16Q0P5N6 197 aa14.61□□□□□ -0.07
ABCA3-206ENST00000569062 RBMY1FQ15415 496 aaKnown RBP14.61□□□□□ -0.07
ABCA3-206ENST00000569062 OR10P1Q8NGE3 313 aa14.61□□□□□ -0.07
ABCA3-206ENST00000569062 S100ZQ8WXG8 99 aa14.61□□□□□ -0.07
ABCA3-206ENST00000569062 TMEM147Q9BVK8 224 aa14.61□□□□□ -0.07
ABCA3-206ENST00000569062 SAV1Q9H4B6 383 aaPredicted RBP14.61□□□□□ -0.07
ABCA3-206ENST00000569062 NPVFQ9HCQ7 196 aa14.61□□□□□ -0.07
ABCA3-206ENST00000569062 FAM240BA0A1B0GVZ2 78 aa14.6□□□□□ -0.07
ABCA3-206ENST00000569062 IGKV3-20P01619 116 aa14.6□□□□□ -0.07
ABCA3-206ENST00000569062 ZNF846Q147U1 533 aa14.6□□□□□ -0.07
ABCA3-206ENST00000569062 C12orf45Q8N5I9 185 aaPredicted RBP14.6□□□□□ -0.07
ABCA3-206ENST00000569062 SCRT1Q9BWW7 348 aa14.6□□□□□ -0.07
ABCA3-206ENST00000569062 XCL2Q9UBD3 114 aa14.6□□□□□ -0.07
ABCA3-206ENST00000569062 LSM5Q9Y4Y9 91 aaKnown RBP14.6□□□□□ -0.07
ABCA3-206ENST00000569062 C5orf51A6NDU8 294 aa14.59□□□□□ -0.07
ABCA3-206ENST00000569062 GALR1P47211 349 aa14.59□□□□□ -0.07
ABCA3-206ENST00000569062 NUTF2P61970 127 aaKnown RBP14.59□□□□□ -0.07
ABCA3-206ENST00000569062 LINC00476Q8WZB0 136 aa14.59□□□□□ -0.07
ABCA3-206ENST00000569062 RSG1Q9BU20 258 aa14.59□□□□□ -0.07
ABCA3-206ENST00000569062 SLC25A39Q9BZJ4 359 aaPredicted RBP14.59□□□□□ -0.07
ABCA3-206ENST00000569062 MGAT4CQ9UBM8 478 aa14.59□□□□□ -0.07
ABCA3-206ENST00000569062 KLK5Q9Y337 293 aaPredicted RBP14.59□□□□□ -0.07
ABCA3-206ENST00000569062 FNDC10F2Z333 226 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 F6UB75 175 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 H3BRN7 92 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 K7EPK0 472 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 ISLRO14498 428 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 LINC00869P0C866 280 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 MIFP14174 115 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 FXYD7P58549 80 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 ASAH1Q13510 395 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 MZT2BQ6NZ67 158 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 FOXI2Q6ZQN5 318 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 C16orf92Q96LL3 132 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 C20orf173Q96LM9 149 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 C1QTNF4Q9BXJ3 329 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 MFFQ9GZY8 342 aa14.58□□□□□ -0.08
ABCA3-206ENST00000569062 L7N2F9 121 aa14.57□□□□□ -0.08
ABCA3-206ENST00000569062 MEOX2P50222 304 aa14.57□□□□□ -0.08
ABCA3-206ENST00000569062 PLP1P60201 277 aa14.57□□□□□ -0.08
ABCA3-206ENST00000569062 RAP2BP61225 183 aa14.57□□□□□ -0.08
ABCA3-206ENST00000569062 SELENOTP62341 195 aa14.57□□□□□ -0.08
ABCA3-206ENST00000569062 VAMP2P63027 116 aa14.57□□□□□ -0.08
ABCA3-206ENST00000569062 SLC38A11Q08AI6 406 aa14.57□□□□□ -0.08
ABCA3-206ENST00000569062 TEPPQ6URK8 271 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms