RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SLC35E1Q96K37 410 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 SSBP4Q9BWG4 385 aaPredicted RBP3.5□□□□□ -1.85
CLK3-219ENST00000567805 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 MFFQ9GZY8 342 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 NRN1Q9NPD7 142 aa3.5□□□□□ -1.85
CLK3-219ENST00000567805 KLK5Q9Y337 293 aaPredicted RBP3.5□□□□□ -1.85
CLK3-219ENST00000567805 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 C9orf170A2RU37 121 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 KNCNA6PVL3 124 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 SNRPGP15A8MWD9 76 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 WRBO00258 174 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 NDUFB6O95139 128 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 CFDP00746 253 aaPredicted RBP3.49□□□□□ -1.85
CLK3-219ENST00000567805 IFNA21P01568 189 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 OR4E1P0C645 316 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 MIFP14174 115 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 ZNF90Q03938 601 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 CNPY1Q3B7I2 92 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 PSMG4Q5JS54 123 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 ACTL10Q5JWF8 245 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 C1orf194Q5T5A4 169 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 SAMD13Q5VXD3 122 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 GGNBP1Q5YKI7 109 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 THAP8Q8NA92 274 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 COQ8AQ8NI60 647 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 C11orf45Q8TAV5 145 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 PHLDA1Q8WV24 401 aaPredicted RBP3.49□□□□□ -1.85
CLK3-219ENST00000567805 LINC00476Q8WZB0 136 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 RAB40CQ96S21 281 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 TRGV9Q99603 122 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 C7orf50Q9BRJ6 194 aaKnown RBP3.49□□□□□ -1.85
CLK3-219ENST00000567805 PBDC1Q9BVG4 233 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 MAGT1Q9H0U3 335 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 NDUFA13Q9P0J0 144 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 FBXL17Q9UF56 701 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 PAIP2BQ9ULR5 123 aaKnown RBP3.49□□□□□ -1.85
CLK3-219ENST00000567805 VPS13DQ5THJ4 4388 aa3.49□□□□□ -1.85
CLK3-219ENST00000567805 IGKV1OR2-108A0A075B7D4 117 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 LINC00854A0A1B0GVQ3 168 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 ZNF705EA8MWA4 302 aaPredicted RBP3.48□□□□□ -1.85
CLK3-219ENST00000567805 PRSS46E5RG02 174 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 H3BMM0 161 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 H3BP45 60 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 ADAP1O75689 374 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 LY6G6CO95867 125 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 GIG44P09565 113 aaPredicted RBP3.48□□□□□ -1.85
CLK3-219ENST00000567805 IL7P13232 177 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 C4BPBP20851 252 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 S100A7P31151 101 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 BTCP35070 178 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 ID1P41134 155 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 NKX2-1P43699 371 aaPredicted RBP3.48□□□□□ -1.85
CLK3-219ENST00000567805 PSMB3P49720 205 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 NANOS2P60321 138 aaKnown RBP3.48□□□□□ -1.85
CLK3-219ENST00000567805 LYZP61626 148 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 NUTF2P61970 127 aaKnown RBP3.48□□□□□ -1.85
CLK3-219ENST00000567805 SPANXN5Q5MJ07 72 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 OR8I2Q8N0Y5 310 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 Q8NAQ8 132 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 BPIFCQ8NFQ6 507 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 OR4D5Q8NGN0 318 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 PPP1R14BQ96C90 147 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 SDHCQ99643 169 aaPredicted RBP3.48□□□□□ -1.85
CLK3-219ENST00000567805 C1QTNF4Q9BXJ3 329 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 KRTAP4-5Q9BYR2 181 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 HRH4Q9H3N8 390 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 SLC45A2Q9UMX9 530 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 FLVCR2Q9UPI3 526 aa3.48□□□□□ -1.85
CLK3-219ENST00000567805 STRAPQ9Y3F4 350 aaKnown RBP3.48□□□□□ -1.85
CLK3-219ENST00000567805 EPPK1P58107 5090 aaKnown RBP3.48□□□□□ -1.85
CLK3-219ENST00000567805 IGHV4-28A0A0C4DH34 117 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 ZNF98A6NK75 572 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 C11orf94C9JXX5 98 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 FNDC10F2Z333 226 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 ISLRO14498 428 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 SOCS3O14543 225 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 DEFB4AO15263 64 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 SSSCA1O60232 199 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 RBMY1A1P0DJD3 496 aaKnown RBP3.47□□□□□ -1.85
CLK3-219ENST00000567805 RBMY1CP0DJD4 496 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 HLA-DRB4P13762 266 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 ANXA7P20073 488 aaKnown RBP3.47□□□□□ -1.85
CLK3-219ENST00000567805 GALR1P47211 349 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 MEOX2P50222 304 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 TCTAP57738 103 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 POLR2GP62487 172 aaKnown RBP eCLIP3.47□□□□□ -1.85
CLK3-219ENST00000567805 AKR1C1Q04828 323 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 OR2F1Q13607 317 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 RBMY1FQ15415 496 aaKnown RBP3.47□□□□□ -1.85
CLK3-219ENST00000567805 C4orf46Q504U0 113 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 SPATA31B1PQ5VZV4 182 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 FOXI2Q6ZQN5 318 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 ACOT7LQ6ZUV0 252 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 TMEM144Q7Z5S9 345 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 CSNK1G2-AS1Q8NCQ2 148 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 C2CD4CQ8TF44 421 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 MITD1Q8WV92 249 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 SMIM8Q96KF7 97 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 GPR82Q96P67 336 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms