RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 SELENOTP62341 195 aa12.82□□□□□ -0.36
COMMD4-220ENST00000567720 ZNF546Q86UE3 836 aa12.82□□□□□ -0.36
COMMD4-220ENST00000567720 FAM24BQ8N5W8 94 aa12.82□□□□□ -0.36
COMMD4-220ENST00000567720 STXBP6Q8NFX7 210 aa12.82□□□□□ -0.36
COMMD4-220ENST00000567720 OR5C1Q8NGR4 320 aa12.82□□□□□ -0.36
COMMD4-220ENST00000567720 SLC25A31Q9H0C2 315 aa12.82□□□□□ -0.36
COMMD4-220ENST00000567720 SRD5A3Q9H8P0 318 aa12.82□□□□□ -0.36
COMMD4-220ENST00000567720 DOK5Q9P104 306 aa12.82□□□□□ -0.36
COMMD4-220ENST00000567720 STAB2Q8WWQ8 2551 aa12.82□□□□□ -0.36
COMMD4-220ENST00000567720 GIPP09681 153 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-220ENST00000567720 LYL1P12980 280 aa12.81□□□□□ -0.36
COMMD4-220ENST00000567720 ORM2P19652 201 aa12.81□□□□□ -0.36
COMMD4-220ENST00000567720 RPL11P62913 178 aaKnown RBP12.81□□□□□ -0.36
COMMD4-220ENST00000567720 BAXQ07812 192 aa12.81□□□□□ -0.36
COMMD4-220ENST00000567720 OR1B1Q8NGR6 318 aa12.81□□□□□ -0.36
COMMD4-220ENST00000567720 CITED4Q96RK1 184 aa12.81□□□□□ -0.36
COMMD4-220ENST00000567720 ASCL2Q99929 193 aa12.81□□□□□ -0.36
COMMD4-220ENST00000567720 GGTLC1Q9BX51 225 aa12.81□□□□□ -0.36
COMMD4-220ENST00000567720 SLC45A2Q9UMX9 530 aa12.81□□□□□ -0.36
COMMD4-220ENST00000567720 TRAV2A0A0B4J234 112 aa12.8□□□□□ -0.36
COMMD4-220ENST00000567720 HELTA6NFD8 242 aa12.8□□□□□ -0.36
COMMD4-220ENST00000567720 PLP1P60201 277 aa12.8□□□□□ -0.36
COMMD4-220ENST00000567720 SIGLEC15Q6ZMC9 328 aa12.8□□□□□ -0.36
COMMD4-220ENST00000567720 WFDC3Q8IUB2 231 aa12.8□□□□□ -0.36
COMMD4-220ENST00000567720 SBSPONQ8IVN8 264 aa12.8□□□□□ -0.36
COMMD4-220ENST00000567720 DCANP1Q8TF63 244 aa12.8□□□□□ -0.36
COMMD4-220ENST00000567720 MAP6D1Q9H9H5 199 aa12.8□□□□□ -0.36
COMMD4-220ENST00000567720 HSPB11Q9Y547 144 aa12.8□□□□□ -0.36
COMMD4-220ENST00000567720 AGRNO00468 2067 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 H3BRN7 92 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 K7EQG2 157 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 CAMLGP49069 296 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 PAFAH1B2P68402 229 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 CLINT1Q14677 625 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 ATP6V1FQ16864 119 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 PPP1R14BQ96C90 147 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 FAM110AQ9BQ89 295 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 SCRT1Q9BWW7 348 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 SLC25A32Q9H2D1 315 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 TUBA4BQ9H853 241 aa12.79□□□□□ -0.36
COMMD4-220ENST00000567720 RBMY1BA6NDE4 496 aaKnown RBP12.78□□□□□ -0.36
COMMD4-220ENST00000567720 RBMY1EA6NEQ0 496 aaKnown RBP12.78□□□□□ -0.36
COMMD4-220ENST00000567720 DNASE2O00115 360 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-220ENST00000567720 RBMY1DP0C7P1 496 aaKnown RBP12.78□□□□□ -0.36
COMMD4-220ENST00000567720 FGF7P21781 194 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 RPL12P30050 165 aaKnown RBP12.78□□□□□ -0.36
COMMD4-220ENST00000567720 OPCMLQ14982 345 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 ZNF124Q15973 351 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 Q5BKY6 102 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 MIC13Q5XKP0 118 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 LEMD1Q68G75 181 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 LINC00322Q6ZN03 302 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-220ENST00000567720 THAP6Q8TBB0 222 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 ASB13Q8WXK3 278 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 UHRF2Q96PU4 802 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 ARL6Q9H0F7 186 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 PFDN2Q9UHV9 154 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 HIGD1AQ9Y241 93 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 NBEAL2Q6ZNJ1 2754 aa12.78□□□□□ -0.36
COMMD4-220ENST00000567720 ZNF98A6NK75 572 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 HYPMO75409 117 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 PRR20EP86478 221 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 PRR20CP86479 221 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 PRR20DP86480 221 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 PRR20BP86481 221 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 PRR20AP86496 221 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 C1orf194Q5T5A4 169 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 PATE2Q6UY27 113 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 APRG1Q8IVJ8 170 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 NPCDR1Q9BY65 106 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 SLC25A39Q9BZJ4 359 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-220ENST00000567720 SLC25A22Q9H936 323 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 NRN1Q9NPD7 142 aa12.77□□□□□ -0.37
COMMD4-220ENST00000567720 G3V3Q6 166 aa12.76□□□□□ -0.37
COMMD4-220ENST00000567720 OR5G3P0C626 314 aa12.76□□□□□ -0.37
COMMD4-220ENST00000567720 RAP2BP61225 183 aa12.76□□□□□ -0.37
COMMD4-220ENST00000567720 ATP5SQ99766 215 aa12.76□□□□□ -0.37
COMMD4-220ENST00000567720 ARV1Q9H2C2 271 aa12.76□□□□□ -0.37
COMMD4-220ENST00000567720 FBXL17Q9UF56 701 aa12.76□□□□□ -0.37
COMMD4-220ENST00000567720 ZNF688P0C7X2 276 aa12.75□□□□□ -0.37
COMMD4-220ENST00000567720 AP2S1P53680 142 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-220ENST00000567720 DEFB131AP59861 70 aa12.75□□□□□ -0.37
COMMD4-220ENST00000567720 RAB31Q13636 194 aa12.75□□□□□ -0.37
COMMD4-220ENST00000567720 HAGHQ16775 308 aa12.75□□□□□ -0.37
COMMD4-220ENST00000567720 PXDC1Q5TGL8 231 aa12.75□□□□□ -0.37
COMMD4-220ENST00000567720 OR8I2Q8N0Y5 310 aa12.75□□□□□ -0.37
COMMD4-220ENST00000567720 CHAC2Q8WUX2 184 aa12.75□□□□□ -0.37
COMMD4-220ENST00000567720 C17orf77Q96MU5 243 aa12.75□□□□□ -0.37
COMMD4-220ENST00000567720 SMIM3Q9BZL3 60 aa12.75□□□□□ -0.37
COMMD4-220ENST00000567720 PXMP4Q9Y6I8 212 aa12.75□□□□□ -0.37
COMMD4-220ENST00000567720 SOCS3O14543 225 aa12.74□□□□□ -0.37
COMMD4-220ENST00000567720 COX7A2P2O60397 106 aa12.74□□□□□ -0.37
COMMD4-220ENST00000567720 MPDU1O75352 247 aa12.74□□□□□ -0.37
COMMD4-220ENST00000567720 RPL29P47914 159 aaKnown RBP12.74□□□□□ -0.37
COMMD4-220ENST00000567720 B2MP61769 119 aa12.74□□□□□ -0.37
COMMD4-220ENST00000567720 MORN5Q5VZ52 161 aa12.74□□□□□ -0.37
COMMD4-220ENST00000567720 OR2T35Q8NGX2 323 aa12.74□□□□□ -0.37
COMMD4-220ENST00000567720 TMEM37Q8WXS4 190 aa12.74□□□□□ -0.37
COMMD4-220ENST00000567720 TM2D3Q9BRN9 247 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms