RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	RND2	P52198	227 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	ATP5I	P56385	69 aa	Predicted RBP	5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	DEFB135	Q30KP9	77 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	TMED4	Q7Z7H5	227 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	OR1S1	Q8NH92	325 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	DTD1	Q8TEA8	209 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	TMEM170A	Q8WVE7	144 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	NPIPB3	Q92617	1050 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	RNF183	Q96D59	192 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	GRAMD2B	Q96HH9	432 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	CSTL1	Q9H114	145 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	MAP6D1	Q9H9H5	199 aa		5.11	□□□□□ -1.59
SF3B3-209	ENST00000567635	SSNA1	O43805	119 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	PITX3	O75364	302 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	SFT2D2	O95562	160 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	OR4E1	P0C645	316 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	RD3L	P0DJH9	198 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	SLC25A6	P12236	298 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	VAMP1	P23763	118 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	S100P	P25815	95 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	GPX4	P36969	197 aa	Predicted RBP	5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	P2RY1	P47900	373 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	UBE2M	P61081	183 aa	Known RBP	5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	ZNF124	Q15973	351 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	EIF4E3	Q8N5X7	224 aa	Known RBP	5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	LRTM2	Q8N967	370 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	OR11H7	Q8NGC8	314 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	ACY3	Q96HD9	319 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	TCEAL7	Q9BRU2	100 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	RABAC1	Q9UI14	185 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635		U3KQE9	123 aa		5.1	□□□□□ -1.59
SF3B3-209	ENST00000567635	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635		A0A0J9YWU9	116 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	C9orf170	A2RU37	121 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	HELT	A6NFD8	242 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635		K7EQG2	157 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	MED6	O75586	246 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	DEFB131A	P59861	70 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	RAB11A	P62491	216 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	FGL1	Q08830	312 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	GAMT	Q14353	236 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	C16orf54	Q6UWD8	224 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	LYG2	Q86SG7	212 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	C12orf45	Q8N5I9	185 aa	Predicted RBP	5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	STXBP6	Q8NFX7	210 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	GATAD1	Q8WUU5	269 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	LINC00052	Q96N35	136 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	TMED3	Q9Y3Q3	217 aa		5.09	□□□□□ -1.59
SF3B3-209	ENST00000567635	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	DNAH7	Q8WXX0	4024 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635		A6NJY4	79 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	LINC00587	B1AMM8	73 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	FAM90A26	D6RGX4	464 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	JTB	O76095	146 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	TOMM40	O96008	361 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	IL4	P05112	153 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	H2AFB1	P0C5Y9	115 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	PSG1	P11464	419 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	CXCL3	P19876	107 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	RAP2B	P61225	183 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	RPP30	P78346	268 aa	Known RBP	5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	DHRS2	Q13268	280 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	PPP1R1A	Q13522	171 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	USF2	Q15853	346 aa	Predicted RBP	5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	GGNBP1	Q5YKI7	109 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	LEMD1	Q68G75	181 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	STH	Q8IWL8	128 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	FAM24B	Q8N5W8	94 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	TMEM217	Q8N7C4	229 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	OR51G1	Q8NGK1	321 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	MITD1	Q8WV92	249 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	GLMP	Q8WWB7	406 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	ASB13	Q8WXK3	278 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	SLC35E1	Q96K37	410 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	CIB3	Q96Q77	187 aa	Predicted RBP	5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	RARRES2	Q99969	163 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	MGAT4C	Q9UBM8	478 aa		5.08	□□□□□ -1.6
SF3B3-209	ENST00000567635	CSMD3	Q7Z407	3707 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	CXorf65	A6NEN9	183 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	ZFP92	A6NM28	416 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	BUB3	O43684	328 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	SYNGR2	O43760	224 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	HOXB5	P09067	269 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	GIP	P09681	153 aa	Predicted RBP	5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	ZNF688	P0C7X2	276 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	IAPP	P10997	89 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	RAB4B	P61018	213 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	OR11H2	Q8NH07	326 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	DCANP1	Q8TF63	244 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	RAB40C	Q96S21	281 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	MAGT1	Q9H0U3	335 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	OR51M1	Q9H341	326 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	RYR3	Q15413	4870 aa		5.07	□□□□□ -1.6
SF3B3-209	ENST00000567635	IGKV1D-37	A0A075B6S9	117 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	RAB19	A4D1S5	217 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	KNCN	A6PVL3	124 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	SMLR1	H3BR10	107 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	CA1	P00915	261 aa	Predicted RBP	5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	IFNA21	P01568	189 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	SNRPD3	P62318	126 aa	Known RBP	5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms