RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 BLOC1S6Q9UL45 172 aa11.52□□□□□ -0.57
CDH3-205ENST00000566808 SSR3Q9UNL2 185 aa11.52□□□□□ -0.57
CDH3-205ENST00000566808 A0A0J9YY99 117 aa11.51□□□□□ -0.57
CDH3-205ENST00000566808 DUSP14O95147 198 aaKnown RBP11.51□□□□□ -0.57
CDH3-205ENST00000566808 TAS2R60P59551 318 aa11.51□□□□□ -0.57
CDH3-205ENST00000566808 NFE4Q86UQ8 179 aa11.51□□□□□ -0.57
CDH3-205ENST00000566808 OR52E5Q8NH55 327 aa11.51□□□□□ -0.57
CDH3-205ENST00000566808 RNASE11Q8TAA1 199 aaKnown RBP11.51□□□□□ -0.57
CDH3-205ENST00000566808 TMEM70Q9BUB7 260 aa11.51□□□□□ -0.57
CDH3-205ENST00000566808 A0A0G2JRQ6 117 aa11.5□□□□□ -0.57
CDH3-205ENST00000566808 SIVA1O15304 175 aa11.5□□□□□ -0.57
CDH3-205ENST00000566808 ADAP1O75689 374 aa11.5□□□□□ -0.57
CDH3-205ENST00000566808 CLEC2LP0C7M8 214 aa11.5□□□□□ -0.57
CDH3-205ENST00000566808 AQP4P55087 323 aa11.5□□□□□ -0.57
CDH3-205ENST00000566808 ZNF493Q6ZR52 646 aa11.5□□□□□ -0.57
CDH3-205ENST00000566808 LYSMD2Q8IV50 215 aa11.5□□□□□ -0.57
CDH3-205ENST00000566808 OR8I2Q8N0Y5 310 aa11.5□□□□□ -0.57
CDH3-205ENST00000566808 S100A16Q96FQ6 103 aaKnown RBP11.5□□□□□ -0.57
CDH3-205ENST00000566808 ZNF486Q96H40 463 aaPredicted RBP11.5□□□□□ -0.57
CDH3-205ENST00000566808 NOP10Q9NPE3 64 aaKnown RBP11.5□□□□□ -0.57
CDH3-205ENST00000566808 BOLA2-SMG1P6H3BVE0 249 aa11.49□□□□□ -0.57
CDH3-205ENST00000566808 TMEM127O75204 238 aa11.49□□□□□ -0.57
CDH3-205ENST00000566808 TRIM16LQ309B1 348 aa11.49□□□□□ -0.57
CDH3-205ENST00000566808 TMEM144Q7Z5S9 345 aa11.49□□□□□ -0.57
CDH3-205ENST00000566808 NOXA1Q86UR1 476 aa11.49□□□□□ -0.57
CDH3-205ENST00000566808 SPARTQ8N0X7 666 aa11.49□□□□□ -0.57
CDH3-205ENST00000566808 RNASE8Q8TDE3 154 aaKnown RBP11.49□□□□□ -0.57
CDH3-205ENST00000566808 TMEM263Q8WUH6 116 aaKnown RBP11.49□□□□□ -0.57
CDH3-205ENST00000566808 TMEM170AQ8WVE7 144 aa11.49□□□□□ -0.57
CDH3-205ENST00000566808 PPP1R14BQ96C90 147 aa11.49□□□□□ -0.57
CDH3-205ENST00000566808 LINC01587Q99440 93 aa11.49□□□□□ -0.57
CDH3-205ENST00000566808 PLA2G2DQ9UNK4 145 aa11.49□□□□□ -0.57
CDH3-205ENST00000566808 TRAV12-2A0A075B6T6 113 aa11.48□□□□□ -0.57
CDH3-205ENST00000566808 PGAM2P15259 253 aa11.48□□□□□ -0.57
CDH3-205ENST00000566808 HOXA5P20719 270 aa11.48□□□□□ -0.57
CDH3-205ENST00000566808 PRSS3P35030 304 aa11.48□□□□□ -0.57
CDH3-205ENST00000566808 RCVRNP35243 200 aa11.48□□□□□ -0.57
CDH3-205ENST00000566808 PIGPP57054 158 aa11.48□□□□□ -0.57
CDH3-205ENST00000566808 LYZP61626 148 aa11.48□□□□□ -0.57
CDH3-205ENST00000566808 UBE2NLQ5JXB2 153 aa11.48□□□□□ -0.57
CDH3-205ENST00000566808 LINC00612Q8N6U2 182 aa11.48□□□□□ -0.57
CDH3-205ENST00000566808 C3orf85A0A1B0GTC6 90 aa11.47□□□□□ -0.57
CDH3-205ENST00000566808 ZNF182P17025 639 aaPredicted RBP11.47□□□□□ -0.57
CDH3-205ENST00000566808 GALR1P47211 349 aa11.47□□□□□ -0.57
CDH3-205ENST00000566808 FAM219AQ8IW50 185 aa11.47□□□□□ -0.57
CDH3-205ENST00000566808 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.47□□□□□ -0.57
CDH3-205ENST00000566808 ZFP92A6NM28 416 aa11.46□□□□□ -0.57
CDH3-205ENST00000566808 PLA2G1BP04054 148 aaKnown RBP11.46□□□□□ -0.57
CDH3-205ENST00000566808 FABP1P07148 127 aa11.46□□□□□ -0.57
CDH3-205ENST00000566808 HTN1P15515 57 aa11.46□□□□□ -0.57
CDH3-205ENST00000566808 PI3P19957 117 aa11.46□□□□□ -0.57
CDH3-205ENST00000566808 UCP1P25874 307 aa11.46□□□□□ -0.57
CDH3-205ENST00000566808 KLF9Q13886 244 aaPredicted RBP11.46□□□□□ -0.57
CDH3-205ENST00000566808 NMSQ5H8A3 153 aa11.46□□□□□ -0.57
CDH3-205ENST00000566808 SLC25A39Q9BZJ4 359 aaPredicted RBP11.46□□□□□ -0.57
CDH3-205ENST00000566808 CEBPZOSA8MTT3 80 aa11.45□□□□□ -0.58
CDH3-205ENST00000566808 GPX8Q8TED1 209 aa11.45□□□□□ -0.58
CDH3-205ENST00000566808 DEFB104AQ8WTQ1 72 aa11.45□□□□□ -0.58
CDH3-205ENST00000566808 LRP1Q07954 4544 aaKnown RBP11.44□□□□□ -0.58
CDH3-205ENST00000566808 A0A096LPF7 62 aa11.44□□□□□ -0.58
CDH3-205ENST00000566808 NXPH4O95158 308 aa11.44□□□□□ -0.58
CDH3-205ENST00000566808 ZNF90Q03938 601 aa11.44□□□□□ -0.58
CDH3-205ENST00000566808 GAMTQ14353 236 aa11.44□□□□□ -0.58
CDH3-205ENST00000566808 SLC25A32Q9H2D1 315 aa11.44□□□□□ -0.58
CDH3-205ENST00000566808 TNFRSF18Q9Y5U5 241 aa11.44□□□□□ -0.58
CDH3-205ENST00000566808 IGKV1D-37A0A075B6S9 117 aa11.43□□□□□ -0.58
CDH3-205ENST00000566808 ZNF98A6NK75 572 aa11.43□□□□□ -0.58
CDH3-205ENST00000566808 SNRPGP15A8MWD9 76 aa11.43□□□□□ -0.58
CDH3-205ENST00000566808 B3GALNT1O75752 331 aa11.43□□□□□ -0.58
CDH3-205ENST00000566808 RLN2P04090 185 aa11.43□□□□□ -0.58
CDH3-205ENST00000566808 GABARAPL2P60520 117 aa11.43□□□□□ -0.58
CDH3-205ENST00000566808 SP6Q3SY56 376 aa11.43□□□□□ -0.58
CDH3-205ENST00000566808 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.43□□□□□ -0.58
CDH3-205ENST00000566808 ARRDC1Q8N5I2 433 aa11.43□□□□□ -0.58
CDH3-205ENST00000566808 RSG1Q9BU20 258 aa11.43□□□□□ -0.58
CDH3-205ENST00000566808 CACNG5Q9UF02 275 aa11.43□□□□□ -0.58
CDH3-205ENST00000566808 LOC100506127A0A0U1RQW1 187 aa11.42□□□□□ -0.58
CDH3-205ENST00000566808 GAGE12BA1L429 117 aa11.42□□□□□ -0.58
CDH3-205ENST00000566808 GAGE7O76087 117 aa11.42□□□□□ -0.58
CDH3-205ENST00000566808 GAGE12FP0CL80 117 aa11.42□□□□□ -0.58
CDH3-205ENST00000566808 GAGE12GP0CL81 117 aa11.42□□□□□ -0.58
CDH3-205ENST00000566808 GAGE12IP0CL82 117 aa11.42□□□□□ -0.58
CDH3-205ENST00000566808 SAMD12Q8N8I0 201 aa11.42□□□□□ -0.58
CDH3-205ENST00000566808 CCDC71LQ8N9Z2 235 aa11.42□□□□□ -0.58
CDH3-205ENST00000566808 SLC25A22Q9H936 323 aa11.42□□□□□ -0.58
CDH3-205ENST00000566808 COPZ2Q9P299 210 aa11.42□□□□□ -0.58
CDH3-205ENST00000566808 CACFD1Q9UGQ2 172 aa11.42□□□□□ -0.58
CDH3-205ENST00000566808 IGLV5-52A0A0A0MRZ9 124 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 GABARAPH6UMI1 98 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 H7BYZ3 331 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 GABARAPO95166 117 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 RHOBP62745 196 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 LHFPL1Q86WI0 220 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 RNF182Q8N6D2 247 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 ZNF738Q8NE65 137 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 OR4D5Q8NGN0 318 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 NTN5Q8WTR8 489 aaPredicted RBP11.41□□□□□ -0.58
CDH3-205ENST00000566808 SLC35E1Q96K37 410 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 GPR82Q96P67 336 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 TMPRSS5Q9H3S3 457 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms