RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 DNAJC4Q9NNZ3 241 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 DAZ1Q9NQZ3 744 aaKnown RBP5.96□□□□□ -1.46
CDH1-208ENST00000565810 DOK5Q9P104 306 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 HIGD1AQ9Y241 93 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 IGHV3OR16-8A0A075B7F1 116 aa5.95□□□□□ -1.46
CDH1-208ENST00000565810 ZNF207O43670 478 aaKnown RBP5.95□□□□□ -1.46
CDH1-208ENST00000565810 SEC11BP0C7V7 166 aa5.95□□□□□ -1.46
CDH1-208ENST00000565810 CD33P20138 364 aa5.95□□□□□ -1.46
CDH1-208ENST00000565810 USF2Q15853 346 aaPredicted RBP5.95□□□□□ -1.46
CDH1-208ENST00000565810 TM4SF20Q53R12 229 aa5.95□□□□□ -1.46
CDH1-208ENST00000565810 C10orf113Q5VZT2 155 aa5.95□□□□□ -1.46
CDH1-208ENST00000565810 LINC00482Q8N8I6 264 aa5.95□□□□□ -1.46
CDH1-208ENST00000565810 GATAD1Q8WUU5 269 aa5.95□□□□□ -1.46
CDH1-208ENST00000565810 ST8SIA2Q92186 375 aa5.95□□□□□ -1.46
CDH1-208ENST00000565810 MCRIP2Q9BUT9 160 aaKnown RBP5.95□□□□□ -1.46
CDH1-208ENST00000565810 ARV1Q9H2C2 271 aa5.95□□□□□ -1.46
CDH1-208ENST00000565810 ZFAND3Q9H8U3 227 aa5.95□□□□□ -1.46
CDH1-208ENST00000565810 MRPL27Q9P0M9 148 aaKnown RBP5.95□□□□□ -1.46
CDH1-208ENST00000565810 BOLA1Q9Y3E2 137 aa5.95□□□□□ -1.46
CDH1-208ENST00000565810 TRRAPQ9Y4A5 3859 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 IGHV7-4-1A0A0J9YVY3 117 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 A0A1W2PPV4 95 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 TMEM213A2RRL7 107 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 C2orf70A6NJV1 201 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 A8MWP6 167 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 UMAD1C9J7I0 102 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 SPP1P10451 314 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 FOLR2P14207 255 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 M6PRP20645 277 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 CRYBB3P26998 211 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 RHOBP62745 196 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 FAM78BQ5VT40 261 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 LINC00305Q7Z4B0 112 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 OR10G4Q8NGN3 311 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 OR10G9Q8NGN4 311 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 OR10G7Q8NGN6 311 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 DYNLRB2Q8TF09 96 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 SLC25A39Q9BZJ4 359 aaPredicted RBP5.94□□□□□ -1.46
CDH1-208ENST00000565810 SH3BGRL3Q9H299 93 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 SMPXQ9UHP9 88 aa5.94□□□□□ -1.46
CDH1-208ENST00000565810 IGHV3-49A0A0A0MS15 119 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 ZNF98A6NK75 572 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 SEC14L6B5MCN3 397 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 SAP30O75446 220 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 CD5P06127 495 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 C8orf88P0DMB2 117 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 CBLN1P23435 193 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 RAB5CP51148 216 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 TAS2R45P59539 299 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 TMEM41BQ5BJD5 291 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 C9orf66Q5T8R8 295 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 FAM122CQ6P4D5 195 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 OR8I2Q8N0Y5 310 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 WFDC9Q8NEX5 89 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 TMED6Q8WW62 240 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 TMEM37Q8WXS4 190 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 PHYHIPLQ96FC7 376 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 RHPN1-AS1Q9BWJ2 59 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 MRPL32Q9BYC8 188 aaKnown RBP5.93□□□□□ -1.46
CDH1-208ENST00000565810 GPR61Q9BZJ8 451 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 ACTR3CQ9C0K3 210 aaPredicted RBP5.93□□□□□ -1.46
CDH1-208ENST00000565810 SLC25A22Q9H936 323 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 SIGLEC8Q9NYZ4 499 aa5.93□□□□□ -1.46
CDH1-208ENST00000565810 TECRQ9NZ01 308 aaKnown RBP5.93□□□□□ -1.46
CDH1-208ENST00000565810 IGHV3OR16-13A0A075B7E8 117 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 IGHV3-74A0A0B4J1X5 117 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 IGHV3-66A0A0C4DH42 116 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 HELTA6NFD8 242 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 CHEK1O14757 476 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 BUB3O43684 328 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 CSN3P07498 182 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 RPL7P18124 248 aaKnown RBP5.92□□□□□ -1.46
CDH1-208ENST00000565810 GALR1P47211 349 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 CDC34P49427 236 aaPredicted RBP5.92□□□□□ -1.46
CDH1-208ENST00000565810 INSL3P51460 131 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 RPL11P62913 178 aaKnown RBP5.92□□□□□ -1.46
CDH1-208ENST00000565810 GCSAMLQ5JQS6 135 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 PRR31Q5SQ13 230 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 C1orf194Q5T5A4 169 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 C16orf54Q6UWD8 224 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 PATE2Q6UY27 113 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 RBPMS2Q6ZRY4 209 aaKnown RBP5.92□□□□□ -1.46
CDH1-208ENST00000565810 STXBP6Q8NFX7 210 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 ZNF414Q96IQ9 312 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 GPR82Q96P67 336 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 UHRF2Q96PU4 802 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 SHANK2-AS3Q9BTD1 123 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 VSIRQ9H7M9 311 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 RPRMQ9NS64 109 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 FUT9Q9Y231 359 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 RFNGQ9Y644 331 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 U3KQE9 123 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 DNHD1Q96M86 4753 aa5.92□□□□□ -1.46
CDH1-208ENST00000565810 COL6A5A8TX70 2615 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 ZNF785A8K8V0 405 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 H3BRN7 92 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 TEX46H3BTG2 121 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 IFNA7P01567 189 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 APOHP02749 345 aaPredicted RBP5.91□□□□□ -1.46
CDH1-208ENST00000565810 RAB2AP61019 212 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms