RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 GSG1LQ6UXU4 331 aa11.29□□□□□ -0.6
CDH3-204ENST00000565453 TMEM182Q6ZP80 229 aaPredicted RBP11.29□□□□□ -0.6
CDH3-204ENST00000565453 Q6ZTC4 211 aa11.29□□□□□ -0.6
CDH3-204ENST00000565453 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
CDH3-204ENST00000565453 SAV1Q9H4B6 383 aaPredicted RBP11.29□□□□□ -0.6
CDH3-204ENST00000565453 CELA1Q9UNI1 258 aa11.29□□□□□ -0.6
CDH3-204ENST00000565453 FLVCR2Q9UPI3 526 aa11.29□□□□□ -0.6
CDH3-204ENST00000565453 H3BP45 60 aa11.28□□□□□ -0.6
CDH3-204ENST00000565453 CFDP00746 253 aaPredicted RBP11.28□□□□□ -0.6
CDH3-204ENST00000565453 BTCP35070 178 aa11.28□□□□□ -0.6
CDH3-204ENST00000565453 SPANXN5Q5MJ07 72 aa11.28□□□□□ -0.6
CDH3-204ENST00000565453 FOXI2Q6ZQN5 318 aa11.28□□□□□ -0.6
CDH3-204ENST00000565453 OR4D5Q8NGN0 318 aa11.28□□□□□ -0.6
CDH3-204ENST00000565453 LINC00052Q96N35 136 aa11.28□□□□□ -0.6
CDH3-204ENST00000565453 CLUHP3Q96NS8 147 aa11.28□□□□□ -0.6
CDH3-204ENST00000565453 SLC45A2Q9UMX9 530 aa11.28□□□□□ -0.6
CDH3-204ENST00000565453 PMS2P5A8MQ11 134 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 IGLL5B9A064 214 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 GATA2P23769 480 aaPredicted RBP11.27□□□□□ -0.61
CDH3-204ENST00000565453 ID1P41134 155 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 POLR2GP62487 172 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDH3-204ENST00000565453 PRR20EP86478 221 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 PRR20CP86479 221 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 PRR20DP86480 221 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 PRR20BP86481 221 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 PRR20AP86496 221 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 TRIQKQ629K1 86 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 ZNF705AQ6ZN79 300 aaPredicted RBP11.27□□□□□ -0.61
CDH3-204ENST00000565453 ACOT7LQ6ZUV0 252 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 OR8I2Q8N0Y5 310 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 PPP1R14BQ96C90 147 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 SLC25A32Q9H2D1 315 aa11.27□□□□□ -0.61
CDH3-204ENST00000565453 STRAPQ9Y3F4 350 aaKnown RBP11.27□□□□□ -0.61
CDH3-204ENST00000565453 TRAV10A0A0B4J240 114 aa11.26□□□□□ -0.61
CDH3-204ENST00000565453 ZNF98A6NK75 572 aa11.26□□□□□ -0.61
CDH3-204ENST00000565453 ZNF705FA8MVS1 300 aaPredicted RBP11.26□□□□□ -0.61
CDH3-204ENST00000565453 ISLRO14498 428 aa11.26□□□□□ -0.61
CDH3-204ENST00000565453 OR4E1P0C645 316 aa11.26□□□□□ -0.61
CDH3-204ENST00000565453 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
CDH3-204ENST00000565453 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
CDH3-204ENST00000565453 C12orf74Q32Q52 190 aa11.26□□□□□ -0.61
CDH3-204ENST00000565453 ZNF709Q8N972 641 aa11.26□□□□□ -0.61
CDH3-204ENST00000565453 COQ8AQ8NI60 647 aa11.26□□□□□ -0.61
CDH3-204ENST00000565453 C20orf173Q96LM9 149 aa11.26□□□□□ -0.61
CDH3-204ENST00000565453 NEU1Q99519 415 aa11.26□□□□□ -0.61
CDH3-204ENST00000565453 IGKV3-20P01619 116 aa11.25□□□□□ -0.61
CDH3-204ENST00000565453 ANXA7P20073 488 aaKnown RBP11.25□□□□□ -0.61
CDH3-204ENST00000565453 INPP1P49441 399 aa11.25□□□□□ -0.61
CDH3-204ENST00000565453 PAX9P55771 341 aa11.25□□□□□ -0.61
CDH3-204ENST00000565453 FXYD7P58549 80 aa11.25□□□□□ -0.61
CDH3-204ENST00000565453 TMEM144Q7Z5S9 345 aa11.25□□□□□ -0.61
CDH3-204ENST00000565453 BPIFCQ8NFQ6 507 aa11.25□□□□□ -0.61
CDH3-204ENST00000565453 VPS13DQ5THJ4 4388 aa11.25□□□□□ -0.61
CDH3-204ENST00000565453 A0A0J9YX75 114 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 LINC00854A0A1B0GVQ3 168 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 A8MTW9 85 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 F6UB75 175 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 IL7P13232 177 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 ORM2P19652 201 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 MEOX2P50222 304 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 AKR1C1Q04828 323 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 SAMD13Q5VXD3 122 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 SPATA31B1PQ5VZV4 182 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 SMIM8Q96KF7 97 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 C7orf50Q9BRJ6 194 aaKnown RBP11.24□□□□□ -0.61
CDH3-204ENST00000565453 PSENENQ9NZ42 101 aa11.24□□□□□ -0.61
CDH3-204ENST00000565453 IGHV4-4A0A075B6R2 117 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 CCNKO75909 580 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 IFNA21P01568 189 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 GALR1P47211 349 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 TMEM14EPQ6UXP3 125 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 CYP2G1PQ6ZSU1 146 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 ZNF767PQ75MW2 155 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 OR4B1Q8NGF8 309 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 RSG1Q9BU20 258 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 TMEM147Q9BVK8 224 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 SLC35B3Q9H1N7 401 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 SLC25A22Q9H936 323 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 DNAH6Q9C0G6 4158 aa11.23□□□□□ -0.61
CDH3-204ENST00000565453 FRAS1Q86XX4 4008 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 SMIM9A6NGZ8 99 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 H3BRN7 92 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 SSSCA1O60232 199 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 PSG9Q00887 426 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 C4orf46Q504U0 113 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 FAM78BQ5VT40 261 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 DNAH10Q8IVF4 4471 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 OR1B1Q8NGR6 318 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 C16orf92Q96LL3 132 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 RNF126Q9BV68 326 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 RPRMQ9NS64 109 aa11.22□□□□□ -0.61
CDH3-204ENST00000565453 DEFB131BA0A096LNP1 70 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 TRAV8-2A0A0B4J237 113 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 CENPXA8MT69 81 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 PLA2G10O15496 165 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 AMBPP02760 352 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 PLP1P60201 277 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 DLK1P80370 383 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms