RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 GRAMD2BQ96HH9 432 aa19.62■□□□□ 0.73
NME3-208ENST00000565379 PBDC1Q9BVG4 233 aa19.62■□□□□ 0.73
NME3-208ENST00000565379 NPCDR1Q9BY65 106 aa19.62■□□□□ 0.73
NME3-208ENST00000565379 A0A0D9SG52 128 aa19.61■□□□□ 0.73
NME3-208ENST00000565379 ADAMTSL5Q6ZMM2 481 aa19.61■□□□□ 0.73
NME3-208ENST00000565379 OR11H4Q8NGC9 324 aa19.61■□□□□ 0.73
NME3-208ENST00000565379 HYLS1Q96M11 299 aa19.61■□□□□ 0.73
NME3-208ENST00000565379 NEURL2Q9BR09 285 aa19.61■□□□□ 0.73
NME3-208ENST00000565379 CHEK1O14757 476 aa19.6■□□□□ 0.73
NME3-208ENST00000565379 GATA2P23769 480 aaPredicted RBP19.6■□□□□ 0.73
NME3-208ENST00000565379 TMEM182Q6ZP80 229 aaPredicted RBP19.6■□□□□ 0.73
NME3-208ENST00000565379 PRR25Q96S07 402 aa19.6■□□□□ 0.73
NME3-208ENST00000565379 RHPN1-AS1Q9BWJ2 59 aa19.6■□□□□ 0.73
NME3-208ENST00000565379 VSIRQ9H7M9 311 aa19.6■□□□□ 0.73
NME3-208ENST00000565379 WFDC1Q9HC57 220 aa19.6■□□□□ 0.73
NME3-208ENST00000565379 RNF24Q9Y225 148 aa19.6■□□□□ 0.73
NME3-208ENST00000565379 U3KQE9 123 aa19.6■□□□□ 0.73
NME3-208ENST00000565379 BORCS7-ASMTA0A0B4J1R7 106 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 TRAV25A0A0B4J276 109 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 HYPMO75409 117 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 PRR20EP86478 221 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 PRR20CP86479 221 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 PRR20DP86480 221 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 PRR20BP86481 221 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 PRR20AP86496 221 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 DEFB114Q30KQ6 69 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 LAMTOR1Q6IAA8 161 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 LCN12Q6JVE5 192 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 KCNRGQ8N5I3 272 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 STPG3Q8N7X2 389 aa19.59■□□□□ 0.73
NME3-208ENST00000565379 ELOA3CA0A087WX78 387 aaPredicted RBP19.58■□□□□ 0.72
NME3-208ENST00000565379 ORM2P19652 201 aa19.58■□□□□ 0.72
NME3-208ENST00000565379 B2MP61769 119 aa19.58■□□□□ 0.72
NME3-208ENST00000565379 OR1B1Q8NGR6 318 aa19.58■□□□□ 0.72
NME3-208ENST00000565379 SLC39A9Q9NUM3 307 aa19.58■□□□□ 0.72
NME3-208ENST00000565379 EDN2P20800 178 aa19.57■□□□□ 0.72
NME3-208ENST00000565379 C1orf194Q5T5A4 169 aa19.57■□□□□ 0.72
NME3-208ENST00000565379 OR1L4Q8NGR5 311 aa19.57■□□□□ 0.72
NME3-208ENST00000565379 MLXQ9UH92 298 aa19.57■□□□□ 0.72
NME3-208ENST00000565379 PXMP4Q9Y6I8 212 aa19.57■□□□□ 0.72
NME3-208ENST00000565379 JTBO76095 146 aa19.56■□□□□ 0.72
NME3-208ENST00000565379 MIC13Q5XKP0 118 aa19.56■□□□□ 0.72
NME3-208ENST00000565379 PPP1R14BQ96C90 147 aa19.56■□□□□ 0.72
NME3-208ENST00000565379 PFDN5Q99471 154 aa19.56■□□□□ 0.72
NME3-208ENST00000565379 ARL6Q9H0F7 186 aa19.56■□□□□ 0.72
NME3-208ENST00000565379 HIGD1AQ9Y241 93 aa19.56■□□□□ 0.72
NME3-208ENST00000565379 TIMM9Q9Y5J7 89 aa19.56■□□□□ 0.72
NME3-208ENST00000565379 BUB3O43684 328 aa19.55■□□□□ 0.72
NME3-208ENST00000565379 CD300EQ496F6 205 aaPredicted RBP19.55■□□□□ 0.72
NME3-208ENST00000565379 RBPMS2Q6ZRY4 209 aaKnown RBP19.55■□□□□ 0.72
NME3-208ENST00000565379 ST8SIA2Q92186 375 aa19.55■□□□□ 0.72
NME3-208ENST00000565379 ARPC5LQ9BPX5 153 aa19.55■□□□□ 0.72
NME3-208ENST00000565379 IGHV3-49A0A0A0MS15 119 aa19.54■□□□□ 0.72
NME3-208ENST00000565379 COX7A2P2O60397 106 aa19.54■□□□□ 0.72
NME3-208ENST00000565379 APOHP02749 345 aaPredicted RBP19.54■□□□□ 0.72
NME3-208ENST00000565379 OR5G3P0C626 314 aa19.54■□□□□ 0.72
NME3-208ENST00000565379 ZFP69Q49AA0 526 aa19.54■□□□□ 0.72
NME3-208ENST00000565379 C16orf54Q6UWD8 224 aa19.54■□□□□ 0.72
NME3-208ENST00000565379 DNAJC4Q9NNZ3 241 aa19.54■□□□□ 0.72
NME3-208ENST00000565379 TENM3Q9P273 2699 aa19.53■□□□□ 0.72
NME3-208ENST00000565379 KANTRA0A1W2PQU2 76 aa19.53■□□□□ 0.72
NME3-208ENST00000565379 HELTA6NFD8 242 aa19.53■□□□□ 0.72
NME3-208ENST00000565379 GATAD1Q8WUU5 269 aa19.53■□□□□ 0.72
NME3-208ENST00000565379 RNF2Q99496 336 aa19.53■□□□□ 0.72
NME3-208ENST00000565379 ARV1Q9H2C2 271 aa19.53■□□□□ 0.72
NME3-208ENST00000565379 DOK5Q9P104 306 aa19.53■□□□□ 0.72
NME3-208ENST00000565379 IGHV3OR16-13A0A075B7E8 117 aa19.52■□□□□ 0.72
NME3-208ENST00000565379 IGHV3-74A0A0B4J1X5 117 aa19.52■□□□□ 0.72
NME3-208ENST00000565379 CXCL2P19875 107 aa19.52■□□□□ 0.72
NME3-208ENST00000565379 GNPNAT1Q96EK6 184 aaPredicted RBP19.52■□□□□ 0.72
NME3-208ENST00000565379 B9D2Q9BPU9 175 aa19.52■□□□□ 0.72
NME3-208ENST00000565379 PSMG3Q9BT73 122 aaPredicted RBP19.52■□□□□ 0.72
NME3-208ENST00000565379 SLC25A39Q9BZJ4 359 aaPredicted RBP19.52■□□□□ 0.72
NME3-208ENST00000565379 SORL1Q92673 2214 aa19.51■□□□□ 0.71
NME3-208ENST00000565379 TSPAN4O14817 238 aa19.51■□□□□ 0.71
NME3-208ENST00000565379 C10orf113Q5VZT2 155 aa19.51■□□□□ 0.71
NME3-208ENST00000565379 FAM90A2PQ658T7 463 aa19.51■□□□□ 0.71
NME3-208ENST00000565379 RPL7L1Q6DKI1 246 aaKnown RBP19.51■□□□□ 0.71
NME3-208ENST00000565379 TMEM61Q8N0U2 210 aa19.51■□□□□ 0.71
NME3-208ENST00000565379 GPR82Q96P67 336 aa19.51■□□□□ 0.71
NME3-208ENST00000565379 SPAG8Q99932 426 aaPredicted RBP19.51■□□□□ 0.71
NME3-208ENST00000565379 SHANK2-AS3Q9BTD1 123 aa19.51■□□□□ 0.71
NME3-208ENST00000565379 RSG1Q9BU20 258 aa19.51■□□□□ 0.71
NME3-208ENST00000565379 HUWE1Q7Z6Z7 4374 aaKnown RBP19.51■□□□□ 0.71
NME3-208ENST00000565379 KMT2CQ8NEZ4 4911 aaKnown RBP19.5■□□□□ 0.71
NME3-208ENST00000565379 IGHV3-66A0A0C4DH42 116 aa19.5■□□□□ 0.71
NME3-208ENST00000565379 ZNF98A6NK75 572 aa19.5■□□□□ 0.71
NME3-208ENST00000565379 H3BRN7 92 aa19.5■□□□□ 0.71
NME3-208ENST00000565379 BCL2L11O43521 198 aa19.5■□□□□ 0.71
NME3-208ENST00000565379 PFDN1O60925 122 aa19.5■□□□□ 0.71
NME3-208ENST00000565379 EIF5AP63241 154 aaKnown RBP19.5■□□□□ 0.71
NME3-208ENST00000565379 PAFAH1B2P68402 229 aa19.5■□□□□ 0.71
NME3-208ENST00000565379 PATE2Q6UY27 113 aa19.5■□□□□ 0.71
NME3-208ENST00000565379 TCF24Q7RTU0 167 aa19.5■□□□□ 0.71
NME3-208ENST00000565379 GLMPQ8WWB7 406 aa19.5■□□□□ 0.71
NME3-208ENST00000565379 ZNF256Q9Y2P7 627 aaPredicted RBP19.5■□□□□ 0.71
NME3-208ENST00000565379 SERF2P84101 59 aa19.49■□□□□ 0.71
NME3-208ENST00000565379 TMUB2Q71RG4 321 aa19.49■□□□□ 0.71
NME3-208ENST00000565379 LINC00305Q7Z4B0 112 aa19.49■□□□□ 0.71
NME3-208ENST00000565379 HSD17B11Q8NBQ5 300 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms