RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 TSSC4Q9Y5U2 329 aaPredicted RBP4.48□□□□□ -1.69
CHD9-210ENST00000564582 R4GN57 208 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 KIAA2026Q5HYC2 2103 aa4.48□□□□□ -1.69
CHD9-210ENST00000564582 PCNX3Q9H6A9 2034 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 A0A1B0GUT8 65 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 PRSS46E5RG02 174 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 PEX7O00628 323 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 DUX1O43812 170 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 EFNA2O43921 213 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 NGFP01138 241 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 IGLV2-8P01709 118 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 IGLV3-19P01714 112 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 SP1P08047 785 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 OTX2P32243 289 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 FAM27E3Q08E93 113 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 DEFB110Q30KQ9 67 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 C2orf83Q53S99 150 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 MIC13Q5XKP0 118 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 C1orf122Q6ZSJ8 110 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 C2orf91Q6ZV80 131 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 C17orf82Q86X59 251 aaPredicted RBP4.47□□□□□ -1.69
CHD9-210ENST00000564582 OR1L8Q8NGR8 309 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 SNRNP40Q96DI7 357 aaKnown RBP4.47□□□□□ -1.69
CHD9-210ENST00000564582 PERPQ96FX8 193 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 S1PR3Q99500 378 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 ANAPC13Q9BS18 74 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 DEFB126Q9BYW3 111 aa4.47□□□□□ -1.69
CHD9-210ENST00000564582 RNASE7Q9H1E1 156 aaKnown RBP4.47□□□□□ -1.69
CHD9-210ENST00000564582 SPANXB1Q9NS25 103 aaPredicted RBP4.47□□□□□ -1.69
CHD9-210ENST00000564582 KBTBD11-OT1A0A1B0GTJ5 212 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 hDV102S1A0JD36 115 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 C15orf61A6NNL5 157 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 C5orf67F2Z3F1 127 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 J3KRW8 73 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 SS18L1O75177 396 aaPredicted RBP4.46□□□□□ -1.7
CHD9-210ENST00000564582 GAGE7O76087 117 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 APOMO95445 188 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 CA1P00915 261 aaPredicted RBP4.46□□□□□ -1.7
CHD9-210ENST00000564582 HBDP02042 147 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 SPINK8P0C7L1 97 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 GAGE12FP0CL80 117 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 GAGE12GP0CL81 117 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 GAGE12IP0CL82 117 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 FGF6P10767 208 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 CCL2P13500 99 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 EVI2AP22794 236 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 CAMPP49913 170 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 ERHP84090 104 aaKnown RBP4.46□□□□□ -1.7
CHD9-210ENST00000564582 GAGE4Q13068 117 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 LY6DQ14210 128 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 PLGLAQ15195 96 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 FAM120AOSQ5T036 256 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 ZNF562Q6V9R5 426 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 ZNF493Q6ZR52 646 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 Q6ZVH6 145 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 PDPNQ86YL7 162 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 LYPD1Q8N2G4 141 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 CCL4L1Q8NHW4 92 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 PPDPFLQ8WWR9 84 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 ZNF414Q96IQ9 312 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 C1QTNF4Q9BXJ3 329 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 MAP1LC3AQ9H492 121 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 ZNF355PQ9NSJ1 428 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 TMEM160Q9NX00 188 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 OR1A1Q9P1Q5 309 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 RARRES3Q9UL19 164 aa4.46□□□□□ -1.7
CHD9-210ENST00000564582 DOCK11Q5JSL3 2073 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 IGKV3D-15A0A087WSY6 115 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 C10orf142B7Z368 130 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 OR2H2O95918 312 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 GATA2P23769 480 aaPredicted RBP4.45□□□□□ -1.7
CHD9-210ENST00000564582 MPV17P39210 176 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 UBE2L3P68036 154 aaKnown RBP4.45□□□□□ -1.7
CHD9-210ENST00000564582 ADORA2A-AS1P86434 159 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 ZNF816Q0VGE8 651 aaPredicted RBP4.45□□□□□ -1.7
CHD9-210ENST00000564582 FXYD3Q14802 87 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 PRR30Q53SZ7 412 aaPredicted RBP4.45□□□□□ -1.7
CHD9-210ENST00000564582 KLF17Q5JT82 389 aaPredicted RBP4.45□□□□□ -1.7
CHD9-210ENST00000564582 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 CEND1Q8N111 149 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 RND1Q92730 232 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 DLX4Q92988 240 aaPredicted RBP4.45□□□□□ -1.7
CHD9-210ENST00000564582 CYYR1Q96J86 154 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 PAXXQ9BUH6 204 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 TMEM133Q9H2Q1 129 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 NXT2Q9NPJ8 142 aaKnown RBP4.45□□□□□ -1.7
CHD9-210ENST00000564582 TMEM14BQ9NUH8 114 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 BEX4Q9NWD9 120 aaPredicted RBP4.45□□□□□ -1.7
CHD9-210ENST00000564582 PEMTQ9UBM1 199 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 EPDR1Q9UM22 224 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 TCF19Q9Y242 345 aa4.45□□□□□ -1.7
CHD9-210ENST00000564582 SPAG17Q6Q759 2223 aa4.44□□□□□ -1.7
CHD9-210ENST00000564582 IGHV4-28A0A0C4DH34 117 aa4.44□□□□□ -1.7
CHD9-210ENST00000564582 A0A1B0GWB2 263 aa4.44□□□□□ -1.7
CHD9-210ENST00000564582 A0A1W2PQM1 296 aa4.44□□□□□ -1.7
CHD9-210ENST00000564582 TMEM213A2RRL7 107 aa4.44□□□□□ -1.7
CHD9-210ENST00000564582 C19orf71A6NCJ1 209 aa4.44□□□□□ -1.7
CHD9-210ENST00000564582 ZNF716A6NP11 495 aa4.44□□□□□ -1.7
CHD9-210ENST00000564582 SRRM4A7MD48 611 aaKnown RBP4.44□□□□□ -1.7
CHD9-210ENST00000564582 LMO7DNF2Z398 122 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms