RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 GGACTQ9BVM4 153 aa9.9□□□□□ -0.82
CLK3-216ENST00000564468 CSTL1Q9H114 145 aa9.9□□□□□ -0.82
CLK3-216ENST00000564468 NRN1Q9NPD7 142 aa9.9□□□□□ -0.82
CLK3-216ENST00000564468 LSM5Q9Y4Y9 91 aaKnown RBP9.9□□□□□ -0.82
CLK3-216ENST00000564468 C7orf66A4D0T2 115 aa9.89□□□□□ -0.83
CLK3-216ENST00000564468 INMT-MINDY4F8WBC2 141 aa9.89□□□□□ -0.83
CLK3-216ENST00000564468 K7EPK0 472 aa9.89□□□□□ -0.83
CLK3-216ENST00000564468 SPRY2O43597 315 aa9.89□□□□□ -0.83
CLK3-216ENST00000564468 ZNF688P0C7X2 276 aa9.89□□□□□ -0.83
CLK3-216ENST00000564468 IFITM3Q01628 133 aa9.89□□□□□ -0.83
CLK3-216ENST00000564468 OVOL2Q9BRP0 275 aa9.89□□□□□ -0.83
CLK3-216ENST00000564468 BCAP31P51572 246 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 RRAS2P62070 204 aaPredicted RBP9.88□□□□□ -0.83
CLK3-216ENST00000564468 ZNF124Q15973 351 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 DEFB135Q30KP9 77 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 TMEM41BQ5BJD5 291 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 SAMD13Q5VXD3 122 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 LEMD1Q68G75 181 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 TEPPQ6URK8 271 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 CYP2G1PQ6ZSU1 146 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 NRARPQ7Z6K4 114 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 OR8I2Q8N0Y5 310 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 RNF183Q96D59 192 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 TMEM147Q9BVK8 224 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 RNF24Q9Y225 148 aa9.88□□□□□ -0.83
CLK3-216ENST00000564468 DEDDO75618 318 aa9.87□□□□□ -0.83
CLK3-216ENST00000564468 ORM2P19652 201 aa9.87□□□□□ -0.83
CLK3-216ENST00000564468 ID1P41134 155 aa9.87□□□□□ -0.83
CLK3-216ENST00000564468 CAV2P51636 162 aa9.87□□□□□ -0.83
CLK3-216ENST00000564468 S100A10P60903 97 aa9.87□□□□□ -0.83
CLK3-216ENST00000564468 RAP2BP61225 183 aa9.87□□□□□ -0.83
CLK3-216ENST00000564468 CYCSP99999 105 aaKnown RBP9.87□□□□□ -0.83
CLK3-216ENST00000564468 FAM24BQ8N5W8 94 aa9.87□□□□□ -0.83
CLK3-216ENST00000564468 GATAD1Q8WUU5 269 aa9.87□□□□□ -0.83
CLK3-216ENST00000564468 GPR82Q96P67 336 aa9.87□□□□□ -0.83
CLK3-216ENST00000564468 MARVELD1Q9BSK0 173 aa9.87□□□□□ -0.83
CLK3-216ENST00000564468 EPPK1P58107 5090 aaKnown RBP9.86□□□□□ -0.83
CLK3-216ENST00000564468 LCE6AA0A183 80 aa9.86□□□□□ -0.83
CLK3-216ENST00000564468 CCNKO75909 580 aa9.86□□□□□ -0.83
CLK3-216ENST00000564468 RLN2P04090 185 aa9.86□□□□□ -0.83
CLK3-216ENST00000564468 SPP1P10451 314 aa9.86□□□□□ -0.83
CLK3-216ENST00000564468 GALR1P47211 349 aa9.86□□□□□ -0.83
CLK3-216ENST00000564468 MEOX2P50222 304 aa9.86□□□□□ -0.83
CLK3-216ENST00000564468 RAB31Q13636 194 aa9.86□□□□□ -0.83
CLK3-216ENST00000564468 PSMG4Q5JS54 123 aa9.86□□□□□ -0.83
CLK3-216ENST00000564468 MORN3Q6PF18 240 aaPredicted RBP9.86□□□□□ -0.83
CLK3-216ENST00000564468 OR1B1Q8NGR6 318 aa9.86□□□□□ -0.83
CLK3-216ENST00000564468 DYNC2H1Q8NCM8 4307 aaKnown RBP9.85□□□□□ -0.83
CLK3-216ENST00000564468 DNAH7Q8WXX0 4024 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 ZNF98A6NK75 572 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 GOSR2O14653 212 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 HYPMO75409 117 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 GATA2P23769 480 aaPredicted RBP9.85□□□□□ -0.83
CLK3-216ENST00000564468 PLP1P60201 277 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 HBG1P69891 147 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 HBG2P69892 147 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 SLC38A11Q08AI6 406 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 IL15RAQ13261 267 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 RAB32Q13637 225 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 PXDC1Q5TGL8 231 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 ZNF546Q86UE3 836 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 STX12Q86Y82 276 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 LYRM2Q9NU23 88 aaPredicted RBP9.85□□□□□ -0.83
CLK3-216ENST00000564468 HIGD1AQ9Y241 93 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 RYR2Q92736 4967 aa9.85□□□□□ -0.83
CLK3-216ENST00000564468 CA1P00915 261 aaPredicted RBP9.84□□□□□ -0.83
CLK3-216ENST00000564468 OR5G3P0C626 314 aa9.84□□□□□ -0.83
CLK3-216ENST00000564468 LINC00869P0C866 280 aa9.84□□□□□ -0.83
CLK3-216ENST00000564468 S100A11P31949 105 aa9.84□□□□□ -0.83
CLK3-216ENST00000564468 PSMB3P49720 205 aa9.84□□□□□ -0.83
CLK3-216ENST00000564468 NUTF2P61970 127 aaKnown RBP9.84□□□□□ -0.83
CLK3-216ENST00000564468 ACTL10Q5JWF8 245 aa9.84□□□□□ -0.83
CLK3-216ENST00000564468 TMEM182Q6ZP80 229 aaPredicted RBP9.84□□□□□ -0.83
CLK3-216ENST00000564468 TRPT1Q86TN4 253 aaKnown RBP9.84□□□□□ -0.83
CLK3-216ENST00000564468 TMEM217Q8N7C4 229 aa9.84□□□□□ -0.83
CLK3-216ENST00000564468 NMES1Q9C002 83 aa9.84□□□□□ -0.83
CLK3-216ENST00000564468 C11orf1Q9H5F2 150 aa9.84□□□□□ -0.83
CLK3-216ENST00000564468 SLC25A22Q9H936 323 aa9.84□□□□□ -0.83
CLK3-216ENST00000564468 BIRC6Q9NR09 4857 aa9.83□□□□□ -0.84
CLK3-216ENST00000564468 FAM24AA6NFZ4 105 aa9.83□□□□□ -0.84
CLK3-216ENST00000564468 KNCNA6PVL3 124 aa9.83□□□□□ -0.84
CLK3-216ENST00000564468 ISLRO14498 428 aa9.83□□□□□ -0.84
CLK3-216ENST00000564468 CST7O76096 145 aa9.83□□□□□ -0.84
CLK3-216ENST00000564468 SULT1A1P50225 295 aa9.83□□□□□ -0.84
CLK3-216ENST00000564468 ARL16Q0P5N6 197 aa9.83□□□□□ -0.84
CLK3-216ENST00000564468 ATP6V1FQ16864 119 aa9.83□□□□□ -0.84
CLK3-216ENST00000564468 RARRES2Q99969 163 aa9.83□□□□□ -0.84
CLK3-216ENST00000564468 SLC25A39Q9BZJ4 359 aaPredicted RBP9.83□□□□□ -0.84
CLK3-216ENST00000564468 ARL6Q9H0F7 186 aa9.83□□□□□ -0.84
CLK3-216ENST00000564468 E5RGE8 158 aa9.82□□□□□ -0.84
CLK3-216ENST00000564468 H3BRN7 92 aa9.82□□□□□ -0.84
CLK3-216ENST00000564468 AGPAT2O15120 278 aa9.82□□□□□ -0.84
CLK3-216ENST00000564468 SSNA1O43805 119 aa9.82□□□□□ -0.84
CLK3-216ENST00000564468 RPL7P18124 248 aaKnown RBP9.82□□□□□ -0.84
CLK3-216ENST00000564468 ATF4P18848 351 aaPredicted RBP9.82□□□□□ -0.84
CLK3-216ENST00000564468 SPATA31B1PQ5VZV4 182 aa9.82□□□□□ -0.84
CLK3-216ENST00000564468 ZFAND6Q6FIF0 208 aa9.82□□□□□ -0.84
CLK3-216ENST00000564468 TMEM252Q8N6L7 170 aa9.82□□□□□ -0.84
CLK3-216ENST00000564468 LINC00052Q96N35 136 aa9.82□□□□□ -0.84
CLK3-216ENST00000564468 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms