RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SMIM9A6NGZ8 99 aa17.08■□□□□ 0.32
NME3-206ENST00000564252 SLC25A6P12236 298 aa17.08■□□□□ 0.32
NME3-206ENST00000564252 FAUP35544 74 aaKnown RBP17.08■□□□□ 0.32
NME3-206ENST00000564252 RAB11AP62491 216 aa17.08■□□□□ 0.32
NME3-206ENST00000564252 LRTM2Q8N967 370 aa17.08■□□□□ 0.32
NME3-206ENST00000564252 COQ8AQ8NI60 647 aa17.08■□□□□ 0.32
NME3-206ENST00000564252 NDUFAF3Q9BU61 184 aa17.08■□□□□ 0.32
NME3-206ENST00000564252 KIAA1109Q2LD37 5005 aa17.07■□□□□ 0.32
NME3-206ENST00000564252 TMEM189A5PLL7 270 aa17.07■□□□□ 0.32
NME3-206ENST00000564252 ZNF79Q15937 498 aa17.07■□□□□ 0.32
NME3-206ENST00000564252 IGHV3OR16-12A0A075B7B8 117 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 ISLRO14498 428 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 NOL3O60936 208 aaKnown RBP17.06■□□□□ 0.32
NME3-206ENST00000564252 SPART-AS1P0CW21 52 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 P0DMU3 169 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 FAM231AP0DMU4 169 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 FAM231CP0DMU5 169 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 EMP1P54849 157 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 PAX9P55771 341 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 SPATA31B1PQ5VZV4 182 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 OR8I2Q8N0Y5 310 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 POM121L12Q8N7R1 296 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 OR4B1Q8NGF8 309 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 PPP1R14BQ96C90 147 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 SLC35B3Q9H1N7 401 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 RFNGQ9Y644 331 aa17.06■□□□□ 0.32
NME3-206ENST00000564252 PRSS46E5RG02 174 aa17.05■□□□□ 0.32
NME3-206ENST00000564252 F6UB75 175 aa17.05■□□□□ 0.32
NME3-206ENST00000564252 AP3S2P59780 193 aa17.05■□□□□ 0.32
NME3-206ENST00000564252 TOMM5Q8N4H5 51 aa17.05■□□□□ 0.32
NME3-206ENST00000564252 PAIP2BQ9ULR5 123 aaKnown RBP17.05■□□□□ 0.32
NME3-206ENST00000564252 PKD1P98161 4303 aa17.05■□□□□ 0.32
NME3-206ENST00000564252 MED6O75586 246 aa17.04■□□□□ 0.32
NME3-206ENST00000564252 VAMP1P23763 118 aa17.04■□□□□ 0.32
NME3-206ENST00000564252 PYDC2Q56P42 97 aa17.04■□□□□ 0.32
NME3-206ENST00000564252 FAM78BQ5VT40 261 aa17.04■□□□□ 0.32
NME3-206ENST00000564252 LINC00336Q6ZUF6 198 aa17.04■□□□□ 0.32
NME3-206ENST00000564252 TMED3Q9Y3Q3 217 aa17.04■□□□□ 0.32
NME3-206ENST00000564252 V9GYH0 126 aa17.04■□□□□ 0.32
NME3-206ENST00000564252 A0A0J9YX75 114 aa17.03■□□□□ 0.32
NME3-206ENST00000564252 PSG9Q00887 426 aa17.03■□□□□ 0.32
NME3-206ENST00000564252 SAMD13Q5VXD3 122 aa17.03■□□□□ 0.32
NME3-206ENST00000564252 C20orf173Q96LM9 149 aa17.03■□□□□ 0.32
NME3-206ENST00000564252 C17orf77Q96MU5 243 aa17.03■□□□□ 0.32
NME3-206ENST00000564252 CIB3Q96Q77 187 aaPredicted RBP17.03■□□□□ 0.32
NME3-206ENST00000564252 SLC25A21Q9BQT8 299 aaPredicted RBP17.03■□□□□ 0.32
NME3-206ENST00000564252 MAGT1Q9H0U3 335 aa17.03■□□□□ 0.32
NME3-206ENST00000564252 DKK2Q9UBU2 259 aa17.03■□□□□ 0.32
NME3-206ENST00000564252 SYNGR2O43760 224 aa17.02■□□□□ 0.32
NME3-206ENST00000564252 SFT2D2O95562 160 aa17.02■□□□□ 0.32
NME3-206ENST00000564252 CFDP00746 253 aaPredicted RBP17.02■□□□□ 0.32
NME3-206ENST00000564252 MEOX2P50222 304 aa17.02■□□□□ 0.32
NME3-206ENST00000564252 PPP1R1AQ13522 171 aa17.02■□□□□ 0.32
NME3-206ENST00000564252 GGNBP1Q5YKI7 109 aa17.02■□□□□ 0.32
NME3-206ENST00000564252 EBLN2Q6P2I7 272 aa17.02■□□□□ 0.32
NME3-206ENST00000564252 C1orf158Q8N1D5 194 aa17.02■□□□□ 0.32
NME3-206ENST00000564252 SLC25A32Q9H2D1 315 aa17.02■□□□□ 0.32
NME3-206ENST00000564252 SLC45A2Q9UMX9 530 aa17.02■□□□□ 0.32
NME3-206ENST00000564252 DYNC1H1Q14204 4646 aaKnown RBP17.02■□□□□ 0.31
NME3-206ENST00000564252 WRBO00258 174 aa17.01■□□□□ 0.31
NME3-206ENST00000564252 RPP30P78346 268 aaKnown RBP17.01■□□□□ 0.31
NME3-206ENST00000564252 FAM222AQ5U5X8 452 aa17.01■□□□□ 0.31
NME3-206ENST00000564252 C16orf92Q96LL3 132 aa17.01■□□□□ 0.31
NME3-206ENST00000564252 RPRMQ9NS64 109 aa17.01■□□□□ 0.31
NME3-206ENST00000564252 GOLT1BQ9Y3E0 138 aa17.01■□□□□ 0.31
NME3-206ENST00000564252 DNAH11Q96DT5 4516 aa17■□□□□ 0.31
NME3-206ENST00000564252 TEX48A0A1B0GUV7 120 aa17■□□□□ 0.31
NME3-206ENST00000564252 A0A1B0GVY2 172 aa17■□□□□ 0.31
NME3-206ENST00000564252 ZNF98A6NK75 572 aa17■□□□□ 0.31
NME3-206ENST00000564252 A8MTW9 85 aa17■□□□□ 0.31
NME3-206ENST00000564252 GALR1P47211 349 aa17■□□□□ 0.31
NME3-206ENST00000564252 TMEM182Q6ZP80 229 aaPredicted RBP17■□□□□ 0.31
NME3-206ENST00000564252 DEDD2Q8WXF8 326 aa17■□□□□ 0.31
NME3-206ENST00000564252 NIPSNAP3BQ9BS92 247 aa17■□□□□ 0.31
NME3-206ENST00000564252 SLC25A22Q9H936 323 aa17■□□□□ 0.31
NME3-206ENST00000564252 HOXB5P09067 269 aa16.99■□□□□ 0.31
NME3-206ENST00000564252 GATA2P23769 480 aaPredicted RBP16.99■□□□□ 0.31
NME3-206ENST00000564252 FAM210BQ96KR6 192 aa16.99■□□□□ 0.31
NME3-206ENST00000564252 RSG1Q9BU20 258 aa16.99■□□□□ 0.31
NME3-206ENST00000564252 PLA2G2EQ9NZK7 142 aa16.99■□□□□ 0.31
NME3-206ENST00000564252 DOK5Q9P104 306 aa16.99■□□□□ 0.31
NME3-206ENST00000564252 HBE1P02100 147 aa16.98■□□□□ 0.31
NME3-206ENST00000564252 AMTNQ6UX39 209 aa16.98■□□□□ 0.31
NME3-206ENST00000564252 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.98■□□□□ 0.31
NME3-206ENST00000564252 BPIFCQ8NFQ6 507 aa16.98■□□□□ 0.31
NME3-206ENST00000564252 OR4D5Q8NGN0 318 aa16.98■□□□□ 0.31
NME3-206ENST00000564252 C7orf50Q9BRJ6 194 aaKnown RBP16.98■□□□□ 0.31
NME3-206ENST00000564252 LOC102723971A0A1B0GUV8 181 aa16.97■□□□□ 0.31
NME3-206ENST00000564252 H3BP45 60 aa16.97■□□□□ 0.31
NME3-206ENST00000564252 M0R2N4 97 aa16.97■□□□□ 0.31
NME3-206ENST00000564252 RTL8CO15255 209 aa16.97■□□□□ 0.31
NME3-206ENST00000564252 ORM2P19652 201 aa16.97■□□□□ 0.31
NME3-206ENST00000564252 OXA1LQ15070 435 aa16.97■□□□□ 0.31
NME3-206ENST00000564252 SPANXN5Q5MJ07 72 aa16.97■□□□□ 0.31
NME3-206ENST00000564252 YTHDF2Q9Y5A9 579 aaKnown RBP16.97■□□□□ 0.31
NME3-206ENST00000564252 AKR1C1Q04828 323 aa16.96■□□□□ 0.31
NME3-206ENST00000564252 RRN3P1Q2M238 152 aa16.96■□□□□ 0.31
NME3-206ENST00000564252 ACOT7LQ6ZUV0 252 aa16.96■□□□□ 0.31
NME3-206ENST00000564252 OR1B1Q8NGR6 318 aa16.96■□□□□ 0.31
NME3-206ENST00000564252 TMEM147Q9BVK8 224 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms