RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ZNF343Q6P1L6 599 aa16.97■□□□□ 0.31
LINC01960-201ENST00000563759 PQLC2Q6ZP29 291 aa16.97■□□□□ 0.31
LINC01960-201ENST00000563759 OR5AU1Q8NGC0 362 aa16.97■□□□□ 0.31
LINC01960-201ENST00000563759 RBFOX3A6NFN3 312 aa16.97■□□□□ 0.31
LINC01960-201ENST00000563759 TRBV12-3P01733 135 aa16.97■□□□□ 0.31
LINC01960-201ENST00000563759 PSMB3P49720 205 aa16.97■□□□□ 0.31
LINC01960-201ENST00000563759 OR5B12Q96R08 314 aa16.97■□□□□ 0.31
LINC01960-201ENST00000563759 SLC25A2Q9BXI2 301 aa16.97■□□□□ 0.31
LINC01960-201ENST00000563759 TRAV5A0A0B4J249 113 aa16.96■□□□□ 0.31
LINC01960-201ENST00000563759 GCHFRP30047 84 aa16.96■□□□□ 0.31
LINC01960-201ENST00000563759 SLC25A39Q9BZJ4 359 aaPredicted RBP16.96■□□□□ 0.31
LINC01960-201ENST00000563759 MRPL27Q9P0M9 148 aaKnown RBP16.96■□□□□ 0.31
LINC01960-201ENST00000563759 SETD2Q9BYW2 2564 aaPredicted RBP16.96■□□□□ 0.3
LINC01960-201ENST00000563759 BMPR1BO00238 502 aa16.95■□□□□ 0.3
LINC01960-201ENST00000563759 BCL2P10415 239 aa16.95■□□□□ 0.3
LINC01960-201ENST00000563759 PEA15Q15121 130 aa16.95■□□□□ 0.3
LINC01960-201ENST00000563759 FAM209BQ5JX69 171 aa16.95■□□□□ 0.3
LINC01960-201ENST00000563759 S100A7AQ86SG5 101 aa16.95■□□□□ 0.3
LINC01960-201ENST00000563759 MANBALQ9NQG1 85 aa16.95■□□□□ 0.3
LINC01960-201ENST00000563759 IGHV3OR16-8A0A075B7F1 116 aa16.95■□□□□ 0.3
LINC01960-201ENST00000563759 PPT1P50897 306 aa16.95■□□□□ 0.3
LINC01960-201ENST00000563759 TOMM20LQ6UXN7 152 aa16.95■□□□□ 0.3
LINC01960-201ENST00000563759 RNF152Q8N8N0 203 aa16.95■□□□□ 0.3
LINC01960-201ENST00000563759 RARRES2Q99969 163 aa16.95■□□□□ 0.3
LINC01960-201ENST00000563759 KIAA0141Q14154 515 aaPredicted RBP16.94■□□□□ 0.3
LINC01960-201ENST00000563759 LEMD1Q68G75 181 aa16.94■□□□□ 0.3
LINC01960-201ENST00000563759 MYOZ3Q8TDC0 251 aa16.94■□□□□ 0.3
LINC01960-201ENST00000563759 FAM167A-AS1Q96KT0 104 aa16.94■□□□□ 0.3
LINC01960-201ENST00000563759 SCRT1Q9BWW7 348 aa16.94■□□□□ 0.3
LINC01960-201ENST00000563759 LOC102723971A0A1B0GUV8 181 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 CD5P06127 495 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 OR10J4P0C629 311 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 S100A1P23297 94 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 UBE2L3P68036 154 aaKnown RBP16.93■□□□□ 0.3
LINC01960-201ENST00000563759 UBE2E2Q96LR5 201 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 C16orf95Q9H693 158 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 ZFAND3Q9H8U3 227 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 PEF1Q9UBV8 284 aaKnown RBP16.93■□□□□ 0.3
LINC01960-201ENST00000563759 RABAC1Q9UI14 185 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 H3BRN7 92 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 ZNF506Q5JVG8 444 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 RXFP4Q8TDU9 374 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 ZNF503Q96F45 646 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 ZNF414Q96IQ9 312 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 SHANK2-AS3Q9BTD1 123 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 TMEM167BQ9NRX6 74 aa16.93■□□□□ 0.3
LINC01960-201ENST00000563759 UBE2G2P60604 165 aa16.92■□□□□ 0.3
LINC01960-201ENST00000563759 PMS2P11Q13670 270 aa16.92■□□□□ 0.3
LINC01960-201ENST00000563759 KHDC1LQ5JSQ8 128 aa16.92■□□□□ 0.3
LINC01960-201ENST00000563759 STXBP6Q8NFX7 210 aa16.92■□□□□ 0.3
LINC01960-201ENST00000563759 LINC01006Q8NI28 216 aa16.92■□□□□ 0.3
LINC01960-201ENST00000563759 PAXXQ9BUH6 204 aa16.92■□□□□ 0.3
LINC01960-201ENST00000563759 VAX2Q9UIW0 290 aa16.92■□□□□ 0.3
LINC01960-201ENST00000563759 PAGE4O60829 102 aa16.91■□□□□ 0.3
LINC01960-201ENST00000563759 GGCTO75223 188 aaKnown RBP16.91■□□□□ 0.3
LINC01960-201ENST00000563759 PYYP10082 97 aa16.91■□□□□ 0.3
LINC01960-201ENST00000563759 ICAM4Q14773 271 aa16.91■□□□□ 0.3
LINC01960-201ENST00000563759 OR51M1Q9H341 326 aa16.91■□□□□ 0.3
LINC01960-201ENST00000563759 NDUFA7O95182 113 aa16.9■□□□□ 0.3
LINC01960-201ENST00000563759 LGALS1P09382 135 aaKnown RBP16.9■□□□□ 0.3
LINC01960-201ENST00000563759 S100A7P31151 101 aa16.9■□□□□ 0.3
LINC01960-201ENST00000563759 TAGLN2P37802 199 aaKnown RBP16.9■□□□□ 0.3
LINC01960-201ENST00000563759 C20orf24Q9BUV8 137 aa16.9■□□□□ 0.3
LINC01960-201ENST00000563759 SMDT1Q9H4I9 107 aa16.9■□□□□ 0.3
LINC01960-201ENST00000563759 C9JQL5 133 aa16.89■□□□□ 0.29
LINC01960-201ENST00000563759 NDUFA4O00483 81 aa16.89■□□□□ 0.29
LINC01960-201ENST00000563759 MEF2BQ02080 365 aaPredicted RBP16.89■□□□□ 0.29
LINC01960-201ENST00000563759 C2CD3Q4AC94 2353 aa16.89■□□□□ 0.29
LINC01960-201ENST00000563759 ZNF98A6NK75 572 aa16.88■□□□□ 0.29
LINC01960-201ENST00000563759 KRBOX1C9JBD0 128 aa16.88■□□□□ 0.29
LINC01960-201ENST00000563759 HSPB1P04792 205 aaKnown RBP16.88■□□□□ 0.29
LINC01960-201ENST00000563759 SFTA3P0C7M3 94 aa16.88■□□□□ 0.29
LINC01960-201ENST00000563759 SRSF2Q01130 221 aaKnown RBP16.88■□□□□ 0.29
LINC01960-201ENST00000563759 CST9LP1Q5W188 147 aa16.88■□□□□ 0.29
LINC01960-201ENST00000563759 OR4F5Q8NH21 305 aa16.88■□□□□ 0.29
LINC01960-201ENST00000563759 LINC00052Q96N35 136 aa16.88■□□□□ 0.29
LINC01960-201ENST00000563759 METTL26Q96S19 204 aa16.88■□□□□ 0.29
LINC01960-201ENST00000563759 TMEM218A2RU14 115 aa16.88■□□□□ 0.29
LINC01960-201ENST00000563759 GP9P14770 177 aa16.88■□□□□ 0.29
LINC01960-201ENST00000563759 RNF24Q9Y225 148 aa16.88■□□□□ 0.29
LINC01960-201ENST00000563759 C11orf94C9JXX5 98 aa16.87■□□□□ 0.29
LINC01960-201ENST00000563759 HAX1O00165 279 aa16.87■□□□□ 0.29
LINC01960-201ENST00000563759 ZP3P21754 424 aa16.87■□□□□ 0.29
LINC01960-201ENST00000563759 TCTEX1D4Q5JR98 221 aa16.87■□□□□ 0.29
LINC01960-201ENST00000563759 BPIFA4PQ86YQ2 179 aa16.87■□□□□ 0.29
LINC01960-201ENST00000563759 ZNF207O43670 478 aaKnown RBP16.86■□□□□ 0.29
LINC01960-201ENST00000563759 RPEL1Q2QD12 228 aa16.86■□□□□ 0.29
LINC01960-201ENST00000563759 UNQ9165/PRO28630Q6UXU0 137 aa16.86■□□□□ 0.29
LINC01960-201ENST00000563759 WIPF2Q8TF74 440 aaPredicted RBP16.86■□□□□ 0.29
LINC01960-201ENST00000563759 FXYD5Q96DB9 178 aa16.86■□□□□ 0.29
LINC01960-201ENST00000563759 SLC35B3Q9H1N7 401 aa16.86■□□□□ 0.29
LINC01960-201ENST00000563759 YTHDF2Q9Y5A9 579 aaKnown RBP16.86■□□□□ 0.29
LINC01960-201ENST00000563759 ZNF320A2RRD8 509 aa16.86■□□□□ 0.29
LINC01960-201ENST00000563759 CLPSL1A2RUU4 121 aa16.86■□□□□ 0.29
LINC01960-201ENST00000563759 SNRPCP09234 159 aaKnown RBP16.86■□□□□ 0.29
LINC01960-201ENST00000563759 CEBPGP53567 150 aa16.86■□□□□ 0.29
LINC01960-201ENST00000563759 TMEM190Q8WZ59 177 aa16.86■□□□□ 0.29
LINC01960-201ENST00000563759 OR4F4Q96R69 305 aa16.86■□□□□ 0.29
LINC01960-201ENST00000563759 TMEM14CQ9P0S9 112 aa16.86■□□□□ 0.29
LINC01960-201ENST00000563759 RNF114Q9Y508 228 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms