RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, human

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH11-208	ENST00000563492	SPART-AS1	P0CW21	52 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	HTN3	P15516	51 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	GPX4	P36969	197 aa	Predicted RBP	4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	NUTF2	P61970	127 aa	Known RBP	4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	ZNF79	Q15937	498 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	FAM222A	Q5U5X8	452 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	OR8G2P	Q6IF36	304 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	FOXI2	Q6ZQN5	318 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	NOXA1	Q86UR1	476 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	OR8I2	Q8N0Y5	310 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	CENPS	Q8N2Z9	138 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	ARL6IP6	Q8N6S5	226 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	MCFD2	Q8NI22	146 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	RAB2B	Q8WUD1	216 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	TRIM63	Q969Q1	353 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	PPP1R14B	Q96C90	147 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	SLC35E1	Q96K37	410 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	RSG1	Q9BU20	258 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	C1QTNF4	Q9BXJ3	329 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	SLC25A32	Q9H2D1	315 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	SEPSECS	Q9HD40	501 aa	Known RBP	4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	DKK2	Q9UBU2	259 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	RSL24D1	Q9UHA3	163 aa	Known RBP	4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	SCP2D1	Q9UJQ7	156 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	DNAH11	Q96DT5	4516 aa		4.91	□□□□□ -1.62
CDH11-208	ENST00000563492	TRAV8-2	A0A0B4J237	113 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492		A0A0J9YX75	114 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492		H3BP45	60 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	HOXB5	P09067	269 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	ORM2	P19652	201 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	PSMB3	P49720	205 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	TMBIM6	P55061	237 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	PSG9	Q00887	426 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	PPP1R1A	Q13522	171 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	PYDC2	Q56P42	97 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	AMTN	Q6UX39	209 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	RNF182	Q8N6D2	247 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	THAP8	Q8NA92	274 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	COQ8A	Q8NI60	647 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	SCGB3A2	Q96PL1	93 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	NEU1	Q99519	415 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	TRGV9	Q99603	122 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	NDUFAF3	Q9BU61	184 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	SLC25A22	Q9H936	323 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	DOK5	Q9P104	306 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	BOLA1	Q9Y3E2	137 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.9	□□□□□ -1.63
CDH11-208	ENST00000563492		V9GYH0	126 aa		4.9	□□□□□ -1.63
CDH11-208	ENST00000563492	LOC102723971	A0A1B0GUV8	181 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	PRSS29P	A6NIE9	313 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	ZNF98	A6NK75	572 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	PRSS47	A8MTI9	375 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.89	□□□□□ -1.63
CDH11-208	ENST00000563492		M0R2Z0	102 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	ISLR	O14498	428 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	CRX	O43186	299 aa	Predicted RBP	4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	ADAP1	O75689	374 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	CCNK	O75909	580 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	SFT2D2	O95562	160 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	SNRPC	P09234	159 aa	Known RBP	4.89	□□□□□ -1.63
CDH11-208	ENST00000563492		P0DMU3	169 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	FAM231A	P0DMU4	169 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	FAM231C	P0DMU5	169 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	ANXA3	P12429	323 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	AZU1	P20160	251 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	ID1	P41134	155 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	PAX9	P55771	341 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	FCN2	Q15485	313 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	TMEM128	Q5BJH2	165 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	SPANXN5	Q5MJ07	72 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	C1orf194	Q5T5A4	169 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	GGNBP1	Q5YKI7	109 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492		Q6ZR54	194 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	C16orf92	Q96LL3	132 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	NIPSNAP3B	Q9BS92	247 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	RABL2B	Q9UNT1	228 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	FLVCR2	Q9UPI3	526 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	RFNG	Q9Y644	331 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	PKHD1	P08F94	4074 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	RYR1	P21817	5038 aa		4.89	□□□□□ -1.63
CDH11-208	ENST00000563492	TRAV12-2	A0A075B6T6	113 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	SMIM9	A6NGZ8	99 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	SYNGR2	O43760	224 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	CNN1	P51911	297 aa	Known RBP	4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	ATP5I	P56385	69 aa	Predicted RBP	4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	POLR2G	P62487	172 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	RAB11A	P62491	216 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	SRPX	P78539	464 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	FGL1	Q08830	312 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	SPINK13	Q1W4C9	94 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	EBLN2	Q6P2I7	272 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	TMEM88	Q6PEY1	159 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	LINC00336	Q6ZUF6	198 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	ACOT7L	Q6ZUV0	252 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	ZNF575	Q86XF7	245 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	BAP18	Q8IXM2	172 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	TOMM5	Q8N4H5	51 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	LRTM2	Q8N967	370 aa		4.88	□□□□□ -1.63
CDH11-208	ENST00000563492	OR1B1	Q8NGR6	318 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms