RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 S100A7AQ86SG5 101 aa11.74□□□□□ -0.53
USB1-208ENST00000563207 ZNF546Q86UE3 836 aa11.74□□□□□ -0.53
USB1-208ENST00000563207 CHAC2Q8WUX2 184 aa11.74□□□□□ -0.53
USB1-208ENST00000563207 GRAMD2BQ96HH9 432 aa11.74□□□□□ -0.53
USB1-208ENST00000563207 VSIRQ9H7M9 311 aa11.74□□□□□ -0.53
USB1-208ENST00000563207 MLXQ9UH92 298 aa11.74□□□□□ -0.53
USB1-208ENST00000563207 WDR83OSQ9Y284 106 aa11.74□□□□□ -0.53
USB1-208ENST00000563207 DFFBO76075 338 aa11.73□□□□□ -0.53
USB1-208ENST00000563207 USF2Q15853 346 aaPredicted RBP11.73□□□□□ -0.53
USB1-208ENST00000563207 BTNL8Q6UX41 500 aa11.73□□□□□ -0.53
USB1-208ENST00000563207 RBPMS2Q6ZRY4 209 aaKnown RBP11.73□□□□□ -0.53
USB1-208ENST00000563207 INO80EQ8NBZ0 244 aaPredicted RBP11.73□□□□□ -0.53
USB1-208ENST00000563207 FAM110AQ9BQ89 295 aa11.73□□□□□ -0.53
USB1-208ENST00000563207 U3KQE9 123 aa11.73□□□□□ -0.53
USB1-208ENST00000563207 LYSTQ99698 3801 aa11.72□□□□□ -0.53
USB1-208ENST00000563207 AGPAT2O15120 278 aa11.72□□□□□ -0.53
USB1-208ENST00000563207 EIF2B2P49770 351 aaKnown RBP11.72□□□□□ -0.53
USB1-208ENST00000563207 PLP1P60201 277 aa11.72□□□□□ -0.53
USB1-208ENST00000563207 OR2F1Q13607 317 aa11.72□□□□□ -0.53
USB1-208ENST00000563207 DEFB125Q8N687 156 aa11.72□□□□□ -0.53
USB1-208ENST00000563207 AQP10Q96PS8 301 aa11.72□□□□□ -0.53
USB1-208ENST00000563207 TUBA4BQ9H853 241 aa11.72□□□□□ -0.53
USB1-208ENST00000563207 HYDINQ4G0P3 5121 aa11.72□□□□□ -0.53
USB1-208ENST00000563207 UBE2L5PA0A1B0GUS4 154 aa11.71□□□□□ -0.53
USB1-208ENST00000563207 RBMY1BA6NDE4 496 aaKnown RBP11.71□□□□□ -0.53
USB1-208ENST00000563207 RBMY1EA6NEQ0 496 aaKnown RBP11.71□□□□□ -0.53
USB1-208ENST00000563207 TSPAN4O14817 238 aa11.71□□□□□ -0.53
USB1-208ENST00000563207 RBMY1DP0C7P1 496 aaKnown RBP11.71□□□□□ -0.53
USB1-208ENST00000563207 CAMLGP49069 296 aa11.71□□□□□ -0.53
USB1-208ENST00000563207 CD81P60033 236 aa11.71□□□□□ -0.53
USB1-208ENST00000563207 LYZP61626 148 aa11.71□□□□□ -0.53
USB1-208ENST00000563207 Q5BKY6 102 aa11.71□□□□□ -0.53
USB1-208ENST00000563207 LINC00322Q6ZN03 302 aaPredicted RBP11.71□□□□□ -0.53
USB1-208ENST00000563207 ST8SIA2Q92186 375 aa11.71□□□□□ -0.53
USB1-208ENST00000563207 MGST2Q99735 147 aa11.71□□□□□ -0.53
USB1-208ENST00000563207 ATP5SQ99766 215 aa11.71□□□□□ -0.53
USB1-208ENST00000563207 PBDC1Q9BVG4 233 aa11.71□□□□□ -0.53
USB1-208ENST00000563207 RNF24Q9Y225 148 aa11.71□□□□□ -0.53
USB1-208ENST00000563207 BUB3O43684 328 aa11.7□□□□□ -0.54
USB1-208ENST00000563207 LINC00869P0C866 280 aa11.7□□□□□ -0.54
USB1-208ENST00000563207 RPL29P47914 159 aaKnown RBP11.7□□□□□ -0.54
USB1-208ENST00000563207 AP2S1P53680 142 aaPredicted RBP11.7□□□□□ -0.54
USB1-208ENST00000563207 PAFAH1B2P68402 229 aa11.7□□□□□ -0.54
USB1-208ENST00000563207 CLINT1Q14677 625 aa11.7□□□□□ -0.54
USB1-208ENST00000563207 C1orf194Q5T5A4 169 aa11.7□□□□□ -0.54
USB1-208ENST00000563207 GTSCR1Q86UQ5 136 aa11.7□□□□□ -0.54
USB1-208ENST00000563207 TMEM61Q8N0U2 210 aa11.7□□□□□ -0.54
USB1-208ENST00000563207 RNF2Q99496 336 aa11.7□□□□□ -0.54
USB1-208ENST00000563207 SPAG8Q99932 426 aaPredicted RBP11.7□□□□□ -0.54
USB1-208ENST00000563207 NEURL2Q9BR09 285 aa11.7□□□□□ -0.54
USB1-208ENST00000563207 SPATA25Q9BR10 227 aa11.7□□□□□ -0.54
USB1-208ENST00000563207 PARD6GQ9BYG4 376 aaPredicted RBP11.7□□□□□ -0.54
USB1-208ENST00000563207 EPPK1P58107 5090 aaKnown RBP11.7□□□□□ -0.54
USB1-208ENST00000563207 DNAH1Q9P2D7 4330 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 HELTA6NFD8 242 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 G3V3Q6 166 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 HYPMO75409 117 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 IFNA5P01569 189 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 APOHP02749 345 aaPredicted RBP11.69□□□□□ -0.54
USB1-208ENST00000563207 ORM2P19652 201 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 FGF7P21781 194 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 GATA2P23769 480 aaPredicted RBP11.69□□□□□ -0.54
USB1-208ENST00000563207 GUCA2BQ16661 112 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 FAM90A2PQ658T7 463 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 C16orf54Q6UWD8 224 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 TMEM182Q6ZP80 229 aaPredicted RBP11.69□□□□□ -0.54
USB1-208ENST00000563207 Q6ZRG5 221 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 GGTLC1Q9BX51 225 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 KCNIP2Q9NS61 270 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 FBXL17Q9UF56 701 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 TNFSF18Q9UNG2 199 aa11.69□□□□□ -0.54
USB1-208ENST00000563207 ELOA3CA0A087WX78 387 aaPredicted RBP11.68□□□□□ -0.54
USB1-208ENST00000563207 FXYD6-FXYD2A0A087WZ82 144 aa11.68□□□□□ -0.54
USB1-208ENST00000563207 IGHV3-49A0A0A0MS15 119 aa11.68□□□□□ -0.54
USB1-208ENST00000563207 ZNF266Q14584 549 aa11.68□□□□□ -0.54
USB1-208ENST00000563207 OPCMLQ14982 345 aa11.68□□□□□ -0.54
USB1-208ENST00000563207 TCF24Q7RTU0 167 aa11.68□□□□□ -0.54
USB1-208ENST00000563207 ZNF709Q8N972 641 aa11.68□□□□□ -0.54
USB1-208ENST00000563207 OR1B1Q8NGR6 318 aa11.68□□□□□ -0.54
USB1-208ENST00000563207 SCGB1C1Q8TD33 95 aa11.68□□□□□ -0.54
USB1-208ENST00000563207 PPP1R14BQ96C90 147 aa11.68□□□□□ -0.54
USB1-208ENST00000563207 NPCDR1Q9BY65 106 aa11.68□□□□□ -0.54
USB1-208ENST00000563207 WDR61Q9GZS3 305 aaKnown RBP11.68□□□□□ -0.54
USB1-208ENST00000563207 HIGD1AQ9Y241 93 aa11.68□□□□□ -0.54
USB1-208ENST00000563207 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 TRAV2A0A0B4J234 112 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 LCE6AA0A183 80 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 HMSDA8MTL9 139 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 C17orf112F2Z3M2 114 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 PRR20EP86478 221 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 PRR20CP86479 221 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 PRR20DP86480 221 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 PRR20BP86481 221 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 PRR20AP86496 221 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 STPG3Q8N7X2 389 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 OR1L4Q8NGR5 311 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 GLMPQ8WWB7 406 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 GPR82Q96P67 336 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 PFDN5Q99471 154 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms