RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	PDCD10	Q9BUL8	212 aa		5.73	□□□□□ -1.49
CKLF-208	ENST00000563092	DOK5	Q9P104	306 aa		5.73	□□□□□ -1.49
CKLF-208	ENST00000563092	HMCN2	Q8NDA2	5059 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	IGKV1D-37	A0A075B6S9	117 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092		H3BNG1	76 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092		M0QYG6	137 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	ATG12	O94817	140 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	AZU1	P20160	251 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	AKR1C2	P52895	323 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	LINC00315	P59091	139 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	KRTAP10-1	P60331	282 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	SUPT4H1	P63272	117 aa	Known RBP	5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	FCN2	Q15485	313 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	ESRG	Q1W209	222 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	TMEM69	Q5SWH9	247 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	SAMD13	Q5VXD3	122 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	ETFRF1	Q6IPR1	90 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	KRTAP5-3	Q6L8H2	238 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	EBLN2	Q6P2I7	272 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	OR11H7	Q8NGC8	314 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	OR4C16	Q8NGL9	310 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	COQ8A	Q8NI60	647 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	FCGR1B	Q92637	280 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	ENY2	Q9NPA8	101 aa		5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	MRPS16	Q9Y3D3	137 aa	Known RBP	5.72	□□□□□ -1.49
CKLF-208	ENST00000563092	C3orf85	A0A1B0GTC6	90 aa		5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	CDS2	O95674	445 aa		5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	PIGP	P57054	158 aa		5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	TSPAN5	P62079	268 aa		5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	CLINT1	Q14677	625 aa		5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	NMS	Q5H8A3	153 aa		5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	FAM219A	Q8IW50	185 aa		5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	RXFP4	Q8TDU9	374 aa		5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	RRNAD1	Q96FB5	475 aa	Known RBP	5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	TMEM208	Q9BTX3	173 aa		5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	RPRM	Q9NS64	109 aa		5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	PFDN2	Q9UHV9	154 aa		5.71	□□□□□ -1.5
CKLF-208	ENST00000563092	TMEM238L	A0A1B0GVL6	79 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	B3GALNT1	O75752	331 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	INS	P01308	110 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	PI3	P19957	117 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	M6PR	P20645	277 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	RCVRN	P35243	200 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	FUS	P35637	526 aa	Known RBP eCLIP	5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	MEOX2	P50222	304 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	CNN1	P51911	297 aa	Known RBP	5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	ZNF90	Q03938	601 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	SPINK13	Q1W4C9	94 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	SP6	Q3SY56	376 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	CROCCP3	Q8IVE0	287 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	RNASE8	Q8TDE3	154 aa	Known RBP	5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	ACY3	Q96HD9	319 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	CNBD2	Q96M20	576 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	KRTAP9-3	Q9BYQ3	159 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	HEYL	Q9NQ87	328 aa	Predicted RBP	5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	ZNF586	Q9NXT0	402 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	PTTG2	Q9NZH5	202 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	MDFIC	Q9P1T7	246 aa		5.7	□□□□□ -1.5
CKLF-208	ENST00000563092	TRAV26-1	A0A087WT03	109 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	TRAV8-2	A0A0B4J237	113 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	ZNF701	M0R085	212 aa	Predicted RBP	5.69	□□□□□ -1.5
CKLF-208	ENST00000563092		M0R2Z0	102 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	DUSP14	O95147	198 aa	Known RBP	5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	HOXA5	P20719	270 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	TAS2R60	P59551	318 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	DLK1	P80370	383 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	KLF9	Q13886	244 aa	Predicted RBP	5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	ICAM4	Q14773	271 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	GPR141	Q7Z602	305 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	NOXA1	Q86UR1	476 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	BAP18	Q8IXM2	172 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	TMEM256	Q8N2U0	113 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	ARRDC1	Q8N5I2	433 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	SAMD12	Q8N8I0	201 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	LHFPL5	Q8TAF8	219 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	GLYATL2	Q8WU03	294 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	GNPNAT1	Q96EK6	184 aa	Predicted RBP	5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	UHRF2	Q96PU4	802 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	TMEM222	Q9H0R3	208 aa		5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	5.69	□□□□□ -1.5
CKLF-208	ENST00000563092	LOC100506127	A0A0U1RQW1	187 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	SMR3B	P02814	79 aa	Predicted RBP	5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	PGAM2	P15259	253 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	GPX4	P36969	197 aa	Predicted RBP	5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	RPS19	P39019	145 aa	Known RBP	5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	GAMT	Q14353	236 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	TRIM16L	Q309B1	348 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	ZNF493	Q6ZR52	646 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	OR8I2	Q8N0Y5	310 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	OR4D5	Q8NGN0	318 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	OR10J6P	Q8NGY7	276 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	C16orf74	Q96GX8	76 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	PBDC1	Q9BVG4	233 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	CACNG5	Q9UF02	275 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	CACFD1	Q9UGQ2	172 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092	SLC45A2	Q9UMX9	530 aa		5.68	□□□□□ -1.5
CKLF-208	ENST00000563092		U3KQ87	197 aa		5.68	□□□□□ -1.5

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