RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 PFDN2Q9UHV9 154 aa13.78□□□□□ -0.2
CDH11-206ENST00000562998 FAM24AA6NFZ4 105 aa13.77□□□□□ -0.21
CDH11-206ENST00000562998 GOSR2O14653 212 aa13.77□□□□□ -0.21
CDH11-206ENST00000562998 H2BFSP57053 126 aa13.77□□□□□ -0.21
CDH11-206ENST00000562998 NRN1Q9NPD7 142 aa13.77□□□□□ -0.21
CDH11-206ENST00000562998 SMCO3A2RU48 225 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 UBE2CO00762 179 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 PTTG1O95997 202 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 PVALBP20472 110 aaPredicted RBP13.76□□□□□ -0.21
CDH11-206ENST00000562998 CAV2P51636 162 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 APOC4P55056 127 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 S100A10P60903 97 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 SELENOTP62341 195 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 VWC2Q2TAL6 325 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 TEPPQ6URK8 271 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 Q6ZWC4 215 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 TMEM252Q8N6L7 170 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 OVOL2Q9BRP0 275 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 MGAT4CQ9UBM8 478 aa13.76□□□□□ -0.21
CDH11-206ENST00000562998 IGSF23A1L1A6 192 aa13.75□□□□□ -0.21
CDH11-206ENST00000562998 SLC38A11Q08AI6 406 aa13.75□□□□□ -0.21
CDH11-206ENST00000562998 C17orf77Q96MU5 243 aa13.75□□□□□ -0.21
CDH11-206ENST00000562998 FBXL17Q9UF56 701 aa13.75□□□□□ -0.21
CDH11-206ENST00000562998 TP53TG1Q9Y2A0 90 aa13.75□□□□□ -0.21
CDH11-206ENST00000562998 ZNF98A6NK75 572 aa13.74□□□□□ -0.21
CDH11-206ENST00000562998 H0YIZ8 118 aa13.74□□□□□ -0.21
CDH11-206ENST00000562998 SOCS3O14543 225 aa13.74□□□□□ -0.21
CDH11-206ENST00000562998 CST7O76096 145 aa13.74□□□□□ -0.21
CDH11-206ENST00000562998 ZNF688P0C7X2 276 aa13.74□□□□□ -0.21
CDH11-206ENST00000562998 RPL35AP18077 110 aaKnown RBP13.74□□□□□ -0.21
CDH11-206ENST00000562998 SULT1A1P50225 295 aa13.74□□□□□ -0.21
CDH11-206ENST00000562998 BCAP31P51572 246 aa13.74□□□□□ -0.21
CDH11-206ENST00000562998 CYCSP99999 105 aaKnown RBP13.74□□□□□ -0.21
CDH11-206ENST00000562998 LEMD1Q68G75 181 aa13.74□□□□□ -0.21
CDH11-206ENST00000562998 LINC00869P0C866 280 aa13.73□□□□□ -0.21
CDH11-206ENST00000562998 ORM2P19652 201 aa13.73□□□□□ -0.21
CDH11-206ENST00000562998 MGST2Q99735 147 aa13.73□□□□□ -0.21
CDH11-206ENST00000562998 H3BRN7 92 aa13.72□□□□□ -0.21
CDH11-206ENST00000562998 AGPAT2O15120 278 aa13.72□□□□□ -0.21
CDH11-206ENST00000562998 S100A11P31949 105 aa13.72□□□□□ -0.21
CDH11-206ENST00000562998 PATE2Q6UY27 113 aa13.72□□□□□ -0.21
CDH11-206ENST00000562998 TRPT1Q86TN4 253 aaKnown RBP13.72□□□□□ -0.21
CDH11-206ENST00000562998 OR1B1Q8NGR6 318 aa13.72□□□□□ -0.21
CDH11-206ENST00000562998 SHANK2-AS3Q9BTD1 123 aa13.72□□□□□ -0.21
CDH11-206ENST00000562998 SLC25A39Q9BZJ4 359 aaPredicted RBP13.72□□□□□ -0.21
CDH11-206ENST00000562998 CSTL1Q9H114 145 aa13.72□□□□□ -0.21
CDH11-206ENST00000562998 SLC25A32Q9H2D1 315 aa13.72□□□□□ -0.21
CDH11-206ENST00000562998 OR5AC2Q9NZP5 309 aa13.72□□□□□ -0.21
CDH11-206ENST00000562998 WDR83OSQ9Y284 106 aa13.72□□□□□ -0.21
CDH11-206ENST00000562998 AGRNO00468 2067 aa13.71□□□□□ -0.21
CDH11-206ENST00000562998 HYPMO75409 117 aa13.71□□□□□ -0.21
CDH11-206ENST00000562998 ZNF546Q86UE3 836 aa13.71□□□□□ -0.21
CDH11-206ENST00000562998 OR8I2Q8N0Y5 310 aa13.71□□□□□ -0.21
CDH11-206ENST00000562998 TMEM217Q8N7C4 229 aa13.71□□□□□ -0.21
CDH11-206ENST00000562998 CHAC2Q8WUX2 184 aa13.71□□□□□ -0.21
CDH11-206ENST00000562998 PPP1R14BQ96C90 147 aa13.71□□□□□ -0.21
CDH11-206ENST00000562998 RNF183Q96D59 192 aa13.71□□□□□ -0.21
CDH11-206ENST00000562998 RNF126Q9BV68 326 aa13.71□□□□□ -0.21
CDH11-206ENST00000562998 TMEM147Q9BVK8 224 aa13.71□□□□□ -0.21
CDH11-206ENST00000562998 E5RGE8 158 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 SSNA1O43805 119 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 DEFB135Q30KP9 77 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 PSMG4Q5JS54 123 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 PXDC1Q5TGL8 231 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 STX12Q86Y82 276 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 MUC7Q8TAX7 377 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 PPP1R1CQ8WVI7 109 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 GPR82Q96P67 336 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 SCRT1Q9BWW7 348 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 UQCC1Q9NVA1 299 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 DOK5Q9P104 306 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 HIGD1AQ9Y241 93 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 ALG5Q9Y673 324 aa13.7□□□□□ -0.22
CDH11-206ENST00000562998 CSMD3Q7Z407 3707 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 KNCNA6PVL3 124 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 C3orf84H3BNL1 204 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 SPRY2O43597 315 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 RLN2P04090 185 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 GIG44P09565 113 aaPredicted RBP13.69□□□□□ -0.22
CDH11-206ENST00000562998 S100A7P31151 101 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 SNRPD3P62318 126 aaKnown RBP13.69□□□□□ -0.22
CDH11-206ENST00000562998 HBG1P69891 147 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 HBG2P69892 147 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 PRR20EP86478 221 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 PRR20CP86479 221 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 PRR20DP86480 221 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 PRR20BP86481 221 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 PRR20AP86496 221 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 ATP6V1FQ16864 119 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 LRRC37A5PQ49AS3 106 aa13.69□□□□□ -0.22
CDH11-206ENST00000562998 KMT2CQ8NEZ4 4911 aaKnown RBP13.69□□□□□ -0.22
CDH11-206ENST00000562998 PSMB3P49720 205 aa13.68□□□□□ -0.22
CDH11-206ENST00000562998 RAP2BP61225 183 aa13.68□□□□□ -0.22
CDH11-206ENST00000562998 EWSR1Q01844 656 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDH11-206ENST00000562998 NHLH2Q02577 135 aa13.68□□□□□ -0.22
CDH11-206ENST00000562998 STHQ8IWL8 128 aa13.68□□□□□ -0.22
CDH11-206ENST00000562998 UHRF2Q96PU4 802 aa13.68□□□□□ -0.22
CDH11-206ENST00000562998 ARL6Q9H0F7 186 aa13.68□□□□□ -0.22
CDH11-206ENST00000562998 SLC25A22Q9H936 323 aa13.68□□□□□ -0.22
CDH11-206ENST00000562998 ISLRO14498 428 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms