RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 RPL12P30050 165 aaKnown RBP10.01□□□□□ -0.81
CDH1-204ENST00000562118 RPL29P47914 159 aaKnown RBP10.01□□□□□ -0.81
CDH1-204ENST00000562118 OR2F1Q13607 317 aa10.01□□□□□ -0.81
CDH1-204ENST00000562118 OPCMLQ14982 345 aa10.01□□□□□ -0.81
CDH1-204ENST00000562118 ODF3L2Q3SX64 289 aa10.01□□□□□ -0.81
CDH1-204ENST00000562118 Q5BKY6 102 aa10.01□□□□□ -0.81
CDH1-204ENST00000562118 Q6ZNX1 250 aa10.01□□□□□ -0.81
CDH1-204ENST00000562118 TCF24Q7RTU0 167 aa10.01□□□□□ -0.81
CDH1-204ENST00000562118 GTSCR1Q86UQ5 136 aa10.01□□□□□ -0.81
CDH1-204ENST00000562118 B9D2Q9BPU9 175 aa10.01□□□□□ -0.81
CDH1-204ENST00000562118 NEURL2Q9BR09 285 aa10.01□□□□□ -0.81
CDH1-204ENST00000562118 SEPSECSQ9HD40 501 aaKnown RBP10.01□□□□□ -0.81
CDH1-204ENST00000562118 SMAD5-AS1Q9Y6J3 95 aa10.01□□□□□ -0.81
CDH1-204ENST00000562118 IGHV3OR16-13A0A075B7E8 117 aa10□□□□□ -0.81
CDH1-204ENST00000562118 IGHV3-74A0A0B4J1X5 117 aa10□□□□□ -0.81
CDH1-204ENST00000562118 OR4C46A6NHA9 309 aa10□□□□□ -0.81
CDH1-204ENST00000562118 H3BRN7 92 aa10□□□□□ -0.81
CDH1-204ENST00000562118 K7EQG2 157 aa10□□□□□ -0.81
CDH1-204ENST00000562118 IGHV4-30-4P0DP06 118 aa10□□□□□ -0.81
CDH1-204ENST00000562118 LYZP61626 148 aa10□□□□□ -0.81
CDH1-204ENST00000562118 PATE2Q6UY27 113 aa10□□□□□ -0.81
CDH1-204ENST00000562118 GRAMD2BQ96HH9 432 aa10□□□□□ -0.81
CDH1-204ENST00000562118 NARS2Q96I59 477 aaKnown RBP10□□□□□ -0.81
CDH1-204ENST00000562118 C17orf77Q96MU5 243 aa10□□□□□ -0.81
CDH1-204ENST00000562118 MS4A6AQ9H2W1 248 aa10□□□□□ -0.81
CDH1-204ENST00000562118 SELENOKQ9Y6D0 94 aa10□□□□□ -0.81
CDH1-204ENST00000562118 UBE2L5PA0A1B0GUS4 154 aa9.99□□□□□ -0.81
CDH1-204ENST00000562118 HELTA6NFD8 242 aa9.99□□□□□ -0.81
CDH1-204ENST00000562118 CAMLGP49069 296 aa9.99□□□□□ -0.81
CDH1-204ENST00000562118 AP2S1P53680 142 aaPredicted RBP9.99□□□□□ -0.81
CDH1-204ENST00000562118 CD81P60033 236 aa9.99□□□□□ -0.81
CDH1-204ENST00000562118 GUCA2BQ16661 112 aa9.99□□□□□ -0.81
CDH1-204ENST00000562118 THAP6Q8TBB0 222 aa9.99□□□□□ -0.81
CDH1-204ENST00000562118 ATP5SQ99766 215 aa9.99□□□□□ -0.81
CDH1-204ENST00000562118 SHANK2-AS3Q9BTD1 123 aa9.99□□□□□ -0.81
CDH1-204ENST00000562118 NPCDR1Q9BY65 106 aa9.99□□□□□ -0.81
CDH1-204ENST00000562118 WDR61Q9GZS3 305 aaKnown RBP9.99□□□□□ -0.81
CDH1-204ENST00000562118 PFDN2Q9UHV9 154 aa9.99□□□□□ -0.81
CDH1-204ENST00000562118 TENM3Q9P273 2699 aa9.99□□□□□ -0.81
CDH1-204ENST00000562118 IGHV3-66A0A0C4DH42 116 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 RNF222A6NCQ9 220 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 ZNF98A6NK75 572 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 SOCS3O14543 225 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 HYPMO75409 117 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 SIGLEC15Q6ZMC9 328 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 OR2T35Q8NGX2 323 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 TMEM37Q8WXS4 190 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 CITED4Q96RK1 184 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 PBDC1Q9BVG4 233 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 SLC25A39Q9BZJ4 359 aaPredicted RBP9.98□□□□□ -0.81
CDH1-204ENST00000562118 FBXL17Q9UF56 701 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 TNFSF18Q9UNG2 199 aa9.98□□□□□ -0.81
CDH1-204ENST00000562118 DNAH7Q8WXX0 4024 aa9.97□□□□□ -0.81
CDH1-204ENST00000562118 ELOA3CA0A087WX78 387 aaPredicted RBP9.97□□□□□ -0.81
CDH1-204ENST00000562118 MRPS12O15235 138 aaKnown RBP9.97□□□□□ -0.81
CDH1-204ENST00000562118 FRMD6-AS1P0C7T7 363 aa9.97□□□□□ -0.81
CDH1-204ENST00000562118 RAB31Q13636 194 aa9.97□□□□□ -0.81
CDH1-204ENST00000562118 GPR82Q96P67 336 aa9.97□□□□□ -0.81
CDH1-204ENST00000562118 WFDC10AQ9H1F0 79 aa9.97□□□□□ -0.81
CDH1-204ENST00000562118 WFDC1Q9HC57 220 aa9.97□□□□□ -0.81
CDH1-204ENST00000562118 NRN1Q9NPD7 142 aa9.97□□□□□ -0.81
CDH1-204ENST00000562118 OR11H12B2RN74 326 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 ORM2P19652 201 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 FGF7P21781 194 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 S100A7P31151 101 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 CMC4P56277 68 aaPredicted RBP9.96□□□□□ -0.82
CDH1-204ENST00000562118 PAFAH1B2P68402 229 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 CLINT1Q14677 625 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 MIC13Q5XKP0 118 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 FAM24BQ8N5W8 94 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 OR1B1Q8NGR6 318 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 ARL6Q9H0F7 186 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 ARV1Q9H2C2 271 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 SLC25A32Q9H2D1 315 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 MAP6D1Q9H9H5 199 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 SLC39A9Q9NUM3 307 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 HIGD1AQ9Y241 93 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 STAB2Q8WWQ8 2551 aa9.96□□□□□ -0.82
CDH1-204ENST00000562118 A0A087X0K7 114 aa9.95□□□□□ -0.82
CDH1-204ENST00000562118 RBMY1BA6NDE4 496 aaKnown RBP9.95□□□□□ -0.82
CDH1-204ENST00000562118 RBMY1EA6NEQ0 496 aaKnown RBP9.95□□□□□ -0.82
CDH1-204ENST00000562118 RBMY1DP0C7P1 496 aaKnown RBP9.95□□□□□ -0.82
CDH1-204ENST00000562118 B2MP61769 119 aa9.95□□□□□ -0.82
CDH1-204ENST00000562118 DEFB125Q8N687 156 aa9.95□□□□□ -0.82
CDH1-204ENST00000562118 SCRT1Q9BWW7 348 aa9.95□□□□□ -0.82
CDH1-204ENST00000562118 RNF24Q9Y225 148 aa9.95□□□□□ -0.82
CDH1-204ENST00000562118 PXMP4Q9Y6I8 212 aa9.95□□□□□ -0.82
CDH1-204ENST00000562118 OR5G3P0C626 314 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 SAMD13Q5VXD3 122 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 MORN5Q5VZ52 161 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 S100A7AQ86SG5 101 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 GATAD1Q8WUU5 269 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 ST6GAL2Q96JF0 529 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 UHRF2Q96PU4 802 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 PFDN5Q99471 154 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 TM2D3Q9BRN9 247 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 DNAJC4Q9NNZ3 241 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 KCNIP2Q9NS61 270 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 DOK5Q9P104 306 aa9.94□□□□□ -0.82
CDH1-204ENST00000562118 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms