RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 ZNF767PQ75MW2 155 aa6.9□□□□□ -1.3
NSMCE1-203ENST00000562039 OR8I2Q8N0Y5 310 aa6.9□□□□□ -1.3
NSMCE1-203ENST00000562039 ZBTB8BQ8NAP8 495 aaPredicted RBP6.9□□□□□ -1.3
NSMCE1-203ENST00000562039 OR1B1Q8NGR6 318 aa6.9□□□□□ -1.3
NSMCE1-203ENST00000562039 GATAD1Q8WUU5 269 aa6.9□□□□□ -1.3
NSMCE1-203ENST00000562039 C7orf50Q9BRJ6 194 aaKnown RBP6.9□□□□□ -1.3
NSMCE1-203ENST00000562039 SLC25A32Q9H2D1 315 aa6.9□□□□□ -1.3
NSMCE1-203ENST00000562039 NDUFA13Q9P0J0 144 aa6.9□□□□□ -1.3
NSMCE1-203ENST00000562039 XCL2Q9UBD3 114 aa6.9□□□□□ -1.3
NSMCE1-203ENST00000562039 IGHV3OR16-12A0A075B7B8 117 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 PIGBOS1A0A0B4J2F0 54 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 IGHV4-28A0A0C4DH34 117 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 C5orf51A6NDU8 294 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 MBPP02686 304 aaPredicted RBP6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 FABP1P07148 127 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 SNRPCP09234 159 aaKnown RBP6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 ATP5IP56385 69 aaPredicted RBP6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 SNRPD3P62318 126 aaKnown RBP6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 CNPY1Q3B7I2 92 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 CEMP1Q6PRD7 247 aaPredicted RBP6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 OR4B1Q8NGF8 309 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 C11orf45Q8TAV5 145 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 PHLDA1Q8WV24 401 aaPredicted RBP6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 C20orf173Q96LM9 149 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 RSG1Q9BU20 258 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 SCRT1Q9BWW7 348 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 NUDT15Q9NV35 164 aa6.89□□□□□ -1.31
NSMCE1-203ENST00000562039 PMS2P5A8MQ11 134 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 H3BMM0 161 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 IL5P05113 134 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 H2AFB2P0C5Z0 115 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 OR5G3P0C626 314 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 RBMY1A1P0DJD3 496 aaKnown RBP6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 RBMY1CP0DJD4 496 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 BCAP31P51572 246 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 SLC38A11Q08AI6 406 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 ARL16Q0P5N6 197 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 RBMY1FQ15415 496 aaKnown RBP6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 MORN3Q6PF18 240 aaPredicted RBP6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 CYP2G1PQ6ZSU1 146 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 TMEM217Q8N7C4 229 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 BPIFCQ8NFQ6 507 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 MITD1Q8WV92 249 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 SMIM8Q96KF7 97 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 C16orf92Q96LL3 132 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 TMEM147Q9BVK8 224 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 TBC1D24Q9ULP9 559 aa6.88□□□□□ -1.31
NSMCE1-203ENST00000562039 ELOA3CA0A087WX78 387 aaPredicted RBP6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 FAM240BA0A1B0GVZ2 78 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 NUPR2A6NF83 97 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 FAM24AA6NFZ4 105 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 ZNF98A6NK75 572 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 L7N2F9 121 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 SOCS3O14543 225 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 ZNF705DP0CH99 300 aaPredicted RBP6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 ZNF705BP0CI00 300 aaPredicted RBP6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 SPP1P10451 314 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 HLA-DMBP28068 263 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 ID1P41134 155 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 EMP1P54849 157 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 S100A10P60903 97 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 VAMP2P63027 116 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 ZNF846Q147U1 533 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 TMEM14EPQ6UXP3 125 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 TMEM144Q7Z5S9 345 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 C12orf45Q8N5I9 185 aaPredicted RBP6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 RNF182Q8N6D2 247 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 Q8NAQ8 132 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 ZNF431Q8TF32 576 aaPredicted RBP6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 C17orf77Q96MU5 243 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 UHRF2Q96PU4 802 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 MGAT4CQ9UBM8 478 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 PFDN2Q9UHV9 154 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 X6R8D5 127 aa6.87□□□□□ -1.31
NSMCE1-203ENST00000562039 EPPK1P58107 5090 aaKnown RBP6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 C7orf66A4D0T2 115 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 H3BTX0 84 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 K7EPK0 472 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 CST7O76096 145 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 SIX6O95475 246 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 LINC00869P0C866 280 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 HLA-DRB4P13762 266 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 NUP62P37198 522 aaPredicted RBP6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 CSNK1G2-AS1Q8NCQ2 148 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 OR10P1Q8NGE3 313 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 LINC00476Q8WZB0 136 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 CCDC32Q9BV29 185 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 SLC25A39Q9BZJ4 359 aaPredicted RBP6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 ARL6Q9H0F7 186 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 SLC35B3Q9H1N7 401 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 SAV1Q9H4B6 383 aaPredicted RBP6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 CELA1Q9UNI1 258 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 KLK5Q9Y337 293 aaPredicted RBP6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 HLA-DRB4X5D2U9 266 aa6.86□□□□□ -1.31
NSMCE1-203ENST00000562039 A6NHS1 94 aa6.85□□□□□ -1.31
NSMCE1-203ENST00000562039 H3BRN7 92 aa6.85□□□□□ -1.31
NSMCE1-203ENST00000562039 HYPMO75409 117 aa6.85□□□□□ -1.31
NSMCE1-203ENST00000562039 DEDDO75618 318 aa6.85□□□□□ -1.31
NSMCE1-203ENST00000562039 GALR1P47211 349 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms