RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 LILRA1O75019 489 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 EFEMP2O95967 443 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 TCRAP04437 139 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 IFI27P40305 119 aaPredicted RBP8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 FOXG1P55316 489 aaPredicted RBP8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 OCIAD2Q56VL3 154 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 MRPL52Q86TS9 123 aaKnown RBP8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 NABP1Q96AH0 204 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 GREB1LQ9C091 1923 aaPredicted RBP8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 BSPH1Q075Z2 132 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 PSG3Q16557 428 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 ERG28Q9UKR5 140 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 FOXF2Q12947 444 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 LAGE3Q14657 143 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 CDK2AP2O75956 126 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 PPBPP02775 128 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 RNF182Q8N6D2 247 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 PMS2P5A8MQ11 134 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 SMKR1H3BMG3 65 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 SAP30O75446 220 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 PLA2G5P39877 138 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 TMEM249Q2WGJ8 235 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 ORMDL2Q53FV1 153 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 GREB1Q4ZG55 1949 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 NRXN2Q9P2S2 1712 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 ZIC4Q8N9L1 334 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 VWCEQ96DN2 955 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 IMMP1LQ96LU5 166 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 PNRC2Q9NPJ4 139 aaKnown RBP8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 PVRIGQ6DKI7 326 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 SLC25A48Q6ZT89 311 aaKnown RBP8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 FAM90A9PA6NNJ1 464 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 B9A039 149 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 FAM90A1Q86YD7 464 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 MSRB2Q9Y3D2 182 aa8.41□□□□□ -1.06
GTF3C1-202ENST00000561623 CD5LO43866 347 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 SPINK8P0C7L1 97 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 SELLP14151 372 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 Q6ZRM9 215 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 STPG4Q8N801 248 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 ACACAQ13085 2346 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 FAM231BA6NCW3 169 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 LHBP01229 141 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 C9orf106Q8NAJ2 232 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 PINLYPA6NC86 204 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 NBR2O15453 112 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 PSPNO60542 156 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 APOBEC3AP31941 199 aaPredicted RBP8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 SRSF6Q13247 344 aaKnown RBP8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 LINC00479Q96M42 142 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 MRPL27Q9P0M9 148 aaKnown RBP8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 SIPA1L1O43166 1804 aa8.4□□□□□ -1.06
GTF3C1-202ENST00000561623 RNF223E7ERA6 249 aa8.4□□□□□ -1.07
GTF3C1-202ENST00000561623 RASL11AQ6T310 242 aa8.4□□□□□ -1.07
GTF3C1-202ENST00000561623 FREM3P0C091 2139 aa8.4□□□□□ -1.07
GTF3C1-202ENST00000561623 CD28P10747 220 aa8.4□□□□□ -1.07
GTF3C1-202ENST00000561623 PAX1P15863 534 aa8.4□□□□□ -1.07
GTF3C1-202ENST00000561623 CDPF1Q6NVV7 123 aa8.4□□□□□ -1.07
GTF3C1-202ENST00000561623 LOC285556D6RIA3 1793 aa8.4□□□□□ -1.07
GTF3C1-202ENST00000561623 RBMY1BA6NDE4 496 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 RBMY1EA6NEQ0 496 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 IGHV2-5P01817 119 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 RBMY1DP0C7P1 496 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 RBMY1A1P0DJD3 496 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 RBMY1CP0DJD4 496 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 RNASE6Q93091 150 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 C20orf144Q9BQM9 153 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 SLC25A15Q9Y619 301 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 LINC00473A8K010 186 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 RPRMLQ8N4K4 120 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 RPL15P61313 204 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 M0R2P5 195 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 ZNF415Q09FC8 603 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 KLF17Q5JT82 389 aaPredicted RBP8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 CITED1Q99966 193 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 Q6ZWC4 215 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 LINC01587Q99440 93 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 PRSS22Q9GZN4 317 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 SMPXQ9UHP9 88 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 RALGAPA2Q2PPJ7 1873 aa8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 MRPL14Q6P1L8 145 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-202ENST00000561623 MLNRO43193 412 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 WISP1O95388 367 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 PFN1P07737 140 aaKnown RBP8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 PLNP26678 52 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 DLX4Q92988 240 aaPredicted RBP8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 CHAC1Q9BUX1 264 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 C15orf62A8K5M9 175 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 Q8TAT8 98 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 PHLDA1Q8WV24 401 aaPredicted RBP8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 ARHGEF17Q96PE2 2063 aaPredicted RBP8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 TDGF1P13385 188 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 SLC50A1Q9BRV3 221 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 SLC25A39Q9BZJ4 359 aaPredicted RBP8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 RPUSD1Q9UJJ7 312 aaKnown RBP8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 RALGAPA1Q6GYQ0 2036 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 IGLV3-32A0A0A0MS00 114 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 C17orf100A8MU93 164 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 ATXN8Q156A1 80 aa8.38□□□□□ -1.07
GTF3C1-202ENST00000561623 SH2D1AO60880 128 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms