RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MCRIP1C9JLW8 97 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 G3V318 75 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 H7C1H1 209 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 AIPO00170 330 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 GABRPO00591 440 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 CREBL2O60519 120 aaPredicted RBP2.25□□□□□ -2.05
HERC1-215ENST00000561436 HLA-DQA1P01909 254 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 TRGV3P03979 118 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 IFNA4P05014 189 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 CD5P06127 495 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 CD2P06729 351 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 CD37P11049 281 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 BLVRBP30043 206 aaPredicted RBP2.25□□□□□ -2.05
HERC1-215ENST00000561436 GNG10P50151 68 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 RBM11P57052 281 aaKnown RBP2.25□□□□□ -2.05
HERC1-215ENST00000561436 TPPP2P59282 170 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 TAS2R46P59540 309 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 UBE2MP61081 183 aaKnown RBP2.25□□□□□ -2.05
HERC1-215ENST00000561436 TPBGQ13641 420 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 DIAPH2-AS1Q14236 149 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 RSU1Q15404 277 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 RPEL1Q2QD12 228 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 KLK9Q2XQG4 91 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 DEFB114Q30KQ6 69 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 COX19Q49B96 90 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 CCDC58Q4VC31 144 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 MORN2Q502X0 79 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 UNQ5815/PRO19632Q6UWF5 114 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 FAM131AQ6UXB0 335 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 TMPRSS11AQ6ZMR5 421 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 ZNF833PQ6ZTB9 187 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 PDPNQ86YL7 162 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 GPHB5Q86YW7 130 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 LGI3Q8N145 548 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 SYS1Q8N2H4 156 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.25□□□□□ -2.05
HERC1-215ENST00000561436 OR52N1Q8NH53 320 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 GALMQ96C23 342 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 RBMXL1Q96E39 390 aaKnown RBP2.25□□□□□ -2.05
HERC1-215ENST00000561436 S100A13Q99584 98 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 NABP2Q9BQ15 211 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 SLIRPQ9GZT3 109 aaKnown RBP2.25□□□□□ -2.05
HERC1-215ENST00000561436 C6orf62Q9GZU0 229 aaPredicted RBP2.25□□□□□ -2.05
HERC1-215ENST00000561436 TMEM138Q9NPI0 162 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 OR2S2Q9NQN1 319 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 TVP23BQ9NYZ1 205 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 KLK9Q9UKQ9 250 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 TRAPPC2LQ9UL33 140 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 CMYA5Q8N3K9 4069 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 TET2Q6N021 2002 aaPredicted RBP2.24□□□□□ -2.05
HERC1-215ENST00000561436 HEATR5AQ86XA9 2040 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 DNAH3Q8TD57 4116 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.24□□□□□ -2.05
HERC1-215ENST00000561436 IGHV3-72A0A0B4J1Y9 119 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 CENPXA8MT69 81 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 ANKRD65E5RJM6 399 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 TAAR5O14804 337 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 MPDU1O75352 247 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 DCTN3O75935 186 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 OR7C1O76099 320 aaPredicted RBP2.24□□□□□ -2.05
HERC1-215ENST00000561436 SCTP09683 121 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 PSMB6P28072 239 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 REG1BP48304 166 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 SERPINB10P48595 397 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 HCCSP53701 268 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 RPL23P62829 140 aaKnown RBP2.24□□□□□ -2.05
HERC1-215ENST00000561436 PPP3R1P63098 170 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 PLGLAQ15195 96 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 LGALS9BQ3B8N2 356 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 C12orf73Q69YU5 71 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 NTM-AS1Q6ZSK4 140 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 LYG2Q86SG7 212 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 ARRDC1Q8N5I2 433 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 ACBD7Q8N6N7 88 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 C11orf72Q8NBR9 251 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 NECAP1Q8NC96 275 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 LEAP2Q969E1 77 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 ADAT3Q96EY9 351 aaPredicted RBP2.24□□□□□ -2.05
HERC1-215ENST00000561436 OR10C1Q96KK4 312 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 RDH12Q96NR8 316 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 C11orf68Q9H3H3 251 aaKnown RBP2.24□□□□□ -2.05
HERC1-215ENST00000561436 ABRACLQ9P1F3 81 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 WASHC3Q9Y3C0 194 aa2.24□□□□□ -2.05
HERC1-215ENST00000561436 DNAH1Q9P2D7 4330 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 TRBV7-1A0A0A6YYK4 115 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 A0A0J9YXV3 536 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 DAPL1A0PJW8 107 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 A6NIN4 97 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 OR4C45A6NMZ5 311 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 A8MWP6 167 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 ZNF736B4DX44 427 aaPredicted RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 H0YJW9 148 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 J3QRE1 110 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 GGCTO75223 188 aaKnown RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 RPP14O95059 124 aaKnown RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 DHFRP00374 187 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 HBZP02008 142 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 APOA2P02652 100 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 IL4P05112 153 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 HTR1AP08908 422 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms