RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 ADAMTSL4-AS1Q5T5F5 129 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 C12orf45Q8N5I9 185 aaPredicted RBP4.51□□□□□ -1.69
LRRC28-220ENST00000561253 NECAP1Q8NC96 275 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 OR4A16Q8NH70 328 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 COQ8AQ8NI60 647 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 USMG5Q96IX5 58 aa4.51□□□□□ -1.69
LRRC28-220ENST00000561253 FNDC4Q9H6D8 234 aaPredicted RBP4.51□□□□□ -1.69
LRRC28-220ENST00000561253 MRPL36Q9P0J6 103 aaKnown RBP4.51□□□□□ -1.69
LRRC28-220ENST00000561253 RCL1Q9Y2P8 373 aaKnown RBP4.51□□□□□ -1.69
LRRC28-220ENST00000561253 SORL1Q92673 2214 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 HUWE1Q7Z6Z7 4374 aaKnown RBP4.5□□□□□ -1.69
LRRC28-220ENST00000561253 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.5□□□□□ -1.69
LRRC28-220ENST00000561253 PIGBOS1A0A0B4J2F0 54 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 FAM223BA6NKX1 122 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 CCSO14618 274 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 FCGR2BP31994 310 aaPredicted RBP4.5□□□□□ -1.69
LRRC28-220ENST00000561253 H2BFSP57053 126 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 TPPP2P59282 170 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 NSUN5P1Q3KNT7 163 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 C2orf83Q53S99 150 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 FAM223AQ8IWN6 122 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 ZNF502Q8TBZ5 544 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 GATAD1Q8WUU5 269 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 ATP6V0BQ99437 205 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 PHB2Q99623 299 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 ATG101Q9BSB4 218 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 HINT2Q9BX68 163 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 RBKSQ9H477 322 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 PLEKHA3Q9HB20 300 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 SELENOKQ9Y6D0 94 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 NBEAL2Q6ZNJ1 2754 aa4.5□□□□□ -1.69
LRRC28-220ENST00000561253 SYNGR2O43760 224 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 IFNA17P01571 189 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 IGHV3-11P01762 117 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 HIST1H1BP16401 226 aaKnown RBP4.49□□□□□ -1.69
LRRC28-220ENST00000561253 CXCL3P19876 107 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 MYCNOSP40205 109 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 POLR2GP62487 172 aaKnown RBP eCLIP4.49□□□□□ -1.69
LRRC28-220ENST00000561253 EXOSC2Q13868 293 aaKnown RBP4.49□□□□□ -1.69
LRRC28-220ENST00000561253 RGS21Q2M5E4 152 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 IAH1Q2TAA2 248 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-220ENST00000561253 IL34Q6ZMJ4 242 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 KLHL30-AS1Q8NEE0 82 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 RNASE11Q8TAA1 199 aaKnown RBP4.49□□□□□ -1.69
LRRC28-220ENST00000561253 VN1R17PQ8TDU5 208 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 DTD1Q8TEA8 209 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 C2orf50Q96LR7 162 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 OR5B12Q96R08 314 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 OR4C12Q96R67 309 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 ASCL2Q99929 193 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 ALKBH7Q9BT30 221 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-220ENST00000561253 CACFD1Q9UGQ2 172 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 ALG5Q9Y673 324 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 TENM3Q9P273 2699 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 COL7A1Q02388 2944 aa4.49□□□□□ -1.69
LRRC28-220ENST00000561253 A0A0G2JLM5 398 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 G3V3Q6 166 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 SIX6O95475 246 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 DHFRP00374 187 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 MT-CO2P00403 227 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 IGKV1-17P01599 117 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 HSPB1P04792 205 aaKnown RBP4.48□□□□□ -1.69
LRRC28-220ENST00000561253 NPY1RP25929 384 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 HTR2BP41595 481 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 XGP55808 180 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 ATP5IP56385 69 aaPredicted RBP4.48□□□□□ -1.69
LRRC28-220ENST00000561253 TAS2R30P59541 319 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 ERHP84090 104 aaKnown RBP4.48□□□□□ -1.69
LRRC28-220ENST00000561253 ATP5G2Q06055 141 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 ZNF616Q08AN1 781 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 KLF5Q13887 457 aaPredicted RBP4.48□□□□□ -1.69
LRRC28-220ENST00000561253 PRSS54Q6PEW0 395 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 TMEM14EPQ6UXP3 125 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 ADAMTSL5Q6ZMM2 481 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 OR11H1Q8NG94 326 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 OR4F17Q8NGA8 305 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 OR1L6Q8NGR2 347 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 OR1N2Q8NGR9 330 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 OR1S1Q8NH92 325 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 DLX4Q92988 240 aaPredicted RBP4.48□□□□□ -1.69
LRRC28-220ENST00000561253 OR4F4Q96R69 305 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 CHRDL1Q9BU40 450 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 MAGT1Q9H0U3 335 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 SRD5A3Q9H8P0 318 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 GPN1Q9HCN4 374 aaPredicted RBP4.48□□□□□ -1.69
LRRC28-220ENST00000561253 S4R3C0 116 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 U3KQ87 197 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 DNAH7Q8WXX0 4024 aa4.48□□□□□ -1.69
LRRC28-220ENST00000561253 IGKV1D-37A0A075B6S9 117 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 IGKV1OR2-108A0A075B7D4 117 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 A0A087X002 238 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 TRBV7-1A0A0A6YYK4 115 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 IGHV3-21A0A0B4J1V1 117 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 C13orf42A0A1B0GVH6 325 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 CEBPZOSA8MTT3 80 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 PPP5D1E7EU14 171 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 LINC01619G3V211 115 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 K7EPK0 472 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms