RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CGB3P0DN86 165 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 CGB7P0DN87 165 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 FGF7P21781 194 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 CRYGSP22914 178 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 CD24P25063 80 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 RPL28P46779 137 aaKnown RBP1.35□□□□□ -2.19
RTF1-207ENST00000561076 NOVP48745 357 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 PPP3R1P63098 170 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 MRPS36P82909 103 aaKnown RBP1.35□□□□□ -2.19
RTF1-207ENST00000561076 RELAQ04206 551 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 KLRD1Q13241 179 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 PABPC1L2AQ5JQF8 200 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 GLYATL3Q5SZD4 288 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.35□□□□□ -2.19
RTF1-207ENST00000561076 ZNF880Q6PDB4 577 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 SPINT4Q6UDR6 99 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 LYZL1Q6UWQ5 148 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 Q6ZR54 194 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 C2orf91Q6ZV80 131 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 HMGN2P46Q86SG4 172 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 C8orf59Q8N0T1 100 aaPredicted RBP1.35□□□□□ -2.19
RTF1-207ENST00000561076 ATOH7Q8N100 152 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 KCNRGQ8N5I3 272 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 RPP25LQ8N5L8 163 aaKnown RBP1.35□□□□□ -2.19
RTF1-207ENST00000561076 ST20-AS1Q8NBB2 130 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 CLDND2Q8NHS1 167 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 WFDC5Q8TCV5 224 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 SMCR5Q8TEV8 140 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 RAB37Q96AX2 223 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 OR8B2Q96RD0 313 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 UPK3BQ9BT76 320 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 HIGD2AQ9BW72 106 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 SCRT1Q9BWW7 348 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 TMEM191AQ9H0A3 160 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 MDFICQ9P1T7 246 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 ZNF835Q9Y2P0 537 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 LY96Q9Y6Y9 160 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 AHDC1Q5TGY3 1603 aaPredicted RBP1.35□□□□□ -2.19
RTF1-207ENST00000561076 ABCA6Q8N139 1617 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 TRIP11Q15643 1979 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 NCOA2Q15596 1464 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 ARHGAP35Q9NRY4 1499 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 KIF1BO60333 1816 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 TET2Q6N021 2002 aaPredicted RBP1.35□□□□□ -2.19
RTF1-207ENST00000561076 SHPRHQ149N8 1683 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 ITSN2Q9NZM3 1697 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 DSPPQ9NZW4 1301 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 DOCK5Q9H7D0 1870 aa1.35□□□□□ -2.19
RTF1-207ENST00000561076 PKD1L2Q7Z442 2459 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 BAZ2AQ9UIF9 1905 aaKnown RBP1.34□□□□□ -2.19
RTF1-207ENST00000561076 UNC13BO14795 1591 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 TIAM1Q13009 1591 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 COL16A1Q07092 1604 aaPredicted RBP1.34□□□□□ -2.19
RTF1-207ENST00000561076 MROH1Q8NDA8 1641 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 KIF13BQ9NQT8 1826 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 DOCK3Q8IZD9 2030 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 IGLV4-60A0A075B6I1 120 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 IGLV3-12A0A075B6K2 115 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 IGKV1OR2-108A0A075B7D4 117 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 IGKV3D-20A0A0C4DH25 116 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 IGKV6D-41A0A0C4DH26 115 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 A0A0G2JMM0 328 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 TRBV27A0A0K0K1C4 114 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 PNMA8CA0A1B0GUJ8 204 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 LOC107986453A0A1B0GWG9 222 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 A0A1W2PPB8 328 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 KIR3DP1A8MWS1 328 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 C3orf84H3BNL1 204 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 H7C2G1 150 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 K7ERJ3 54 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 UQCRQO14949 82 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 TIMM17BO60830 172 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 WISP3O95389 354 aaPredicted RBP1.34□□□□□ -2.19
RTF1-207ENST00000561076 IGF2P01344 180 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 PMP2P02689 132 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 APODP05090 189 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 IGLC6P0CF74 106 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 ZNF728P0DKX0 622 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 COX6A1P12074 109 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 MUC1P15941 1255 aaPredicted RBP1.34□□□□□ -2.19
RTF1-207ENST00000561076 AZU1P20160 251 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 GNG4P50150 75 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 FXYD2P54710 66 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 TMEM258P61165 79 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 MAXP61244 160 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 PCBD1P61457 104 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 EBI3Q14213 229 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 ZNF181Q2M3W8 571 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 LINC00483Q53H64 154 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 C2orf83Q53S99 150 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 OCIAD2Q56VL3 154 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 SPANXN5Q5MJ07 72 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 IZUMO2Q6UXV1 221 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 SOSTDC1Q6X4U4 206 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 ADM2Q7Z4H4 148 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 FAM216BQ8N7L0 139 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 OR5D14Q8NGL3 314 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 OR10AC1Q8NH08 325 aa1.34□□□□□ -2.19
RTF1-207ENST00000561076 ZNF418Q8TF45 676 aaPredicted RBP1.34□□□□□ -2.19
RTF1-207ENST00000561076 DCANP1Q8TF63 244 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms