RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 SLC45A2Q9UMX9 530 aa11.73□□□□□ -0.53
LMX1B-204ENST00000561065 SMCO3A2RU48 225 aa11.72□□□□□ -0.53
LMX1B-204ENST00000561065 H3BP45 60 aa11.72□□□□□ -0.53
LMX1B-204ENST00000561065 PRAF2O60831 178 aa11.72□□□□□ -0.53
LMX1B-204ENST00000561065 ID1P41134 155 aa11.72□□□□□ -0.53
LMX1B-204ENST00000561065 DEFB131AP59861 70 aa11.72□□□□□ -0.53
LMX1B-204ENST00000561065 LYZP61626 148 aa11.72□□□□□ -0.53
LMX1B-204ENST00000561065 ZNF90Q03938 601 aa11.72□□□□□ -0.53
LMX1B-204ENST00000561065 PMS2P11Q13670 270 aa11.72□□□□□ -0.53
LMX1B-204ENST00000561065 USF2Q15853 346 aaPredicted RBP11.72□□□□□ -0.53
LMX1B-204ENST00000561065 STHQ8IWL8 128 aa11.72□□□□□ -0.53
LMX1B-204ENST00000561065 NRN1Q9NPD7 142 aa11.72□□□□□ -0.53
LMX1B-204ENST00000561065 K7EQG2 157 aa11.71□□□□□ -0.53
LMX1B-204ENST00000561065 RLN2P04090 185 aa11.71□□□□□ -0.53
LMX1B-204ENST00000561065 BCAP31P51572 246 aa11.71□□□□□ -0.53
LMX1B-204ENST00000561065 DLK1P80370 383 aa11.71□□□□□ -0.53
LMX1B-204ENST00000561065 RAB31Q13636 194 aa11.71□□□□□ -0.53
LMX1B-204ENST00000561065 TMEM41BQ5BJD5 291 aa11.71□□□□□ -0.53
LMX1B-204ENST00000561065 LEMD1Q68G75 181 aa11.71□□□□□ -0.53
LMX1B-204ENST00000561065 OR8I2Q8N0Y5 310 aa11.71□□□□□ -0.53
LMX1B-204ENST00000561065 GPR82Q96P67 336 aa11.71□□□□□ -0.53
LMX1B-204ENST00000561065 TBC1D24Q9ULP9 559 aa11.71□□□□□ -0.53
LMX1B-204ENST00000561065 JTBO76095 146 aa11.7□□□□□ -0.54
LMX1B-204ENST00000561065 MBPP02686 304 aaPredicted RBP11.7□□□□□ -0.54
LMX1B-204ENST00000561065 NUTF2P61970 127 aaKnown RBP11.7□□□□□ -0.54
LMX1B-204ENST00000561065 CYCSP99999 105 aaKnown RBP11.7□□□□□ -0.54
LMX1B-204ENST00000561065 OR2F1Q13607 317 aa11.7□□□□□ -0.54
LMX1B-204ENST00000561065 ACOT7LQ6ZUV0 252 aa11.7□□□□□ -0.54
LMX1B-204ENST00000561065 TMEM217Q8N7C4 229 aa11.7□□□□□ -0.54
LMX1B-204ENST00000561065 GLMPQ8WWB7 406 aa11.7□□□□□ -0.54
LMX1B-204ENST00000561065 SEC22CQ9BRL7 303 aa11.7□□□□□ -0.54
LMX1B-204ENST00000561065 TMEM147Q9BVK8 224 aa11.7□□□□□ -0.54
LMX1B-204ENST00000561065 IGKV1D-37A0A075B6S9 117 aa11.69□□□□□ -0.54
LMX1B-204ENST00000561065 GALR1P47211 349 aa11.69□□□□□ -0.54
LMX1B-204ENST00000561065 MEOX2P50222 304 aa11.69□□□□□ -0.54
LMX1B-204ENST00000561065 RAP2BP61225 183 aa11.69□□□□□ -0.54
LMX1B-204ENST00000561065 MORN3Q6PF18 240 aaPredicted RBP11.69□□□□□ -0.54
LMX1B-204ENST00000561065 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
LMX1B-204ENST00000561065 TMEM14EPQ6UXP3 125 aa11.69□□□□□ -0.54
LMX1B-204ENST00000561065 GATAD1Q8WUU5 269 aa11.69□□□□□ -0.54
LMX1B-204ENST00000561065 FRAS1Q86XX4 4008 aa11.69□□□□□ -0.54
LMX1B-204ENST00000561065 VPS13DQ5THJ4 4388 aa11.69□□□□□ -0.54
LMX1B-204ENST00000561065 C7orf66A4D0T2 115 aa11.68□□□□□ -0.54
LMX1B-204ENST00000561065 CXorf65A6NEN9 183 aa11.68□□□□□ -0.54
LMX1B-204ENST00000561065 PRSS46E5RG02 174 aa11.68□□□□□ -0.54
LMX1B-204ENST00000561065 INMT-MINDY4F8WBC2 141 aa11.68□□□□□ -0.54
LMX1B-204ENST00000561065 DEDDO75618 318 aa11.68□□□□□ -0.54
LMX1B-204ENST00000561065 METTL15P1P0C7V9 234 aa11.68□□□□□ -0.54
LMX1B-204ENST00000561065 CAV2P51636 162 aa11.68□□□□□ -0.54
LMX1B-204ENST00000561065 PXDC1Q5TGL8 231 aa11.68□□□□□ -0.54
LMX1B-204ENST00000561065 DCANP1Q8TF63 244 aa11.68□□□□□ -0.54
LMX1B-204ENST00000561065 LSM5Q9Y4Y9 91 aaKnown RBP11.68□□□□□ -0.54
LMX1B-204ENST00000561065 DNAH6Q9C0G6 4158 aa11.68□□□□□ -0.54
LMX1B-204ENST00000561065 CCSO14618 274 aa11.67□□□□□ -0.54
LMX1B-204ENST00000561065 GOSR2O14653 212 aa11.67□□□□□ -0.54
LMX1B-204ENST00000561065 ZNF688P0C7X2 276 aa11.67□□□□□ -0.54
LMX1B-204ENST00000561065 SPP1P10451 314 aa11.67□□□□□ -0.54
LMX1B-204ENST00000561065 ORM2P19652 201 aa11.67□□□□□ -0.54
LMX1B-204ENST00000561065 PAX9P55771 341 aa11.67□□□□□ -0.54
LMX1B-204ENST00000561065 HBG1P69891 147 aa11.67□□□□□ -0.54
LMX1B-204ENST00000561065 HBG2P69892 147 aa11.67□□□□□ -0.54
LMX1B-204ENST00000561065 CYP2G1PQ6ZSU1 146 aa11.67□□□□□ -0.54
LMX1B-204ENST00000561065 STX12Q86Y82 276 aa11.67□□□□□ -0.54
LMX1B-204ENST00000561065 LINC00476Q8WZB0 136 aa11.67□□□□□ -0.54
LMX1B-204ENST00000561065 IGKV1OR2-108A0A075B7D4 117 aa11.66□□□□□ -0.54
LMX1B-204ENST00000561065 HYPMO75409 117 aa11.66□□□□□ -0.54
LMX1B-204ENST00000561065 CA1P00915 261 aaPredicted RBP11.66□□□□□ -0.54
LMX1B-204ENST00000561065 GIG44P09565 113 aaPredicted RBP11.66□□□□□ -0.54
LMX1B-204ENST00000561065 ATF4P18848 351 aaPredicted RBP11.66□□□□□ -0.54
LMX1B-204ENST00000561065 S100A11P31949 105 aa11.66□□□□□ -0.54
LMX1B-204ENST00000561065 RRAS2P62070 204 aaPredicted RBP11.66□□□□□ -0.54
LMX1B-204ENST00000561065 NRARPQ7Z6K4 114 aa11.66□□□□□ -0.54
LMX1B-204ENST00000561065 OR1B1Q8NGR6 318 aa11.66□□□□□ -0.54
LMX1B-204ENST00000561065 RCL1Q9Y2P8 373 aaKnown RBP11.66□□□□□ -0.54
LMX1B-204ENST00000561065 K7EPK0 472 aa11.65□□□□□ -0.54
LMX1B-204ENST00000561065 C4BPBP20851 252 aa11.65□□□□□ -0.54
LMX1B-204ENST00000561065 S100A10P60903 97 aa11.65□□□□□ -0.54
LMX1B-204ENST00000561065 ATP6V1FQ16864 119 aa11.65□□□□□ -0.54
LMX1B-204ENST00000561065 PSMG4Q5JS54 123 aa11.65□□□□□ -0.54
LMX1B-204ENST00000561065 SPATA31B1PQ5VZV4 182 aa11.65□□□□□ -0.54
LMX1B-204ENST00000561065 TRPT1Q86TN4 253 aaKnown RBP11.65□□□□□ -0.54
LMX1B-204ENST00000561065 ZNF546Q86UE3 836 aa11.65□□□□□ -0.54
LMX1B-204ENST00000561065 MARVELD1Q9BSK0 173 aa11.65□□□□□ -0.54
LMX1B-204ENST00000561065 C1QTNF4Q9BXJ3 329 aa11.65□□□□□ -0.54
LMX1B-204ENST00000561065 HIGD1AQ9Y241 93 aa11.65□□□□□ -0.54
LMX1B-204ENST00000561065 DNAH10Q8IVF4 4471 aa11.65□□□□□ -0.55
LMX1B-204ENST00000561065 NUPR2A6NF83 97 aa11.64□□□□□ -0.55
LMX1B-204ENST00000561065 ZNF98A6NK75 572 aa11.64□□□□□ -0.55
LMX1B-204ENST00000561065 KNCNA6PVL3 124 aa11.64□□□□□ -0.55
LMX1B-204ENST00000561065 PMS2P5A8MQ11 134 aa11.64□□□□□ -0.55
LMX1B-204ENST00000561065 ACTL10Q5JWF8 245 aa11.64□□□□□ -0.55
LMX1B-204ENST00000561065 CEMP1Q6PRD7 247 aaPredicted RBP11.64□□□□□ -0.55
LMX1B-204ENST00000561065 Q6ZRG5 221 aa11.64□□□□□ -0.55
LMX1B-204ENST00000561065 RARRES2Q99969 163 aa11.64□□□□□ -0.55
LMX1B-204ENST00000561065 SLC25A31Q9H0C2 315 aa11.64□□□□□ -0.55
LMX1B-204ENST00000561065 ISLRO14498 428 aa11.63□□□□□ -0.55
LMX1B-204ENST00000561065 SSNA1O43805 119 aa11.63□□□□□ -0.55
LMX1B-204ENST00000561065 OR5G3P0C626 314 aa11.63□□□□□ -0.55
LMX1B-204ENST00000561065 LINC00869P0C866 280 aa11.63□□□□□ -0.55
LMX1B-204ENST00000561065 RPL7P18124 248 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms