RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CCNKO75909 580 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 PVALBP20472 110 aaPredicted RBP9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 S100A7P31151 101 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 CAV2P51636 162 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 PAX9P55771 341 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 DEFA1P59665 94 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 DEFA3P59666 94 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 ACTL10Q5JWF8 245 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 TMEM144Q7Z5S9 345 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 OR1B1Q8NGR6 318 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 RNF183Q96D59 192 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 TMEM147Q9BVK8 224 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 TP53TG1Q9Y2A0 90 aa9.56□□□□□ -0.88
CTDSPL2-209ENST00000560620 DLK1P80370 383 aa9.55□□□□□ -0.88
CTDSPL2-209ENST00000560620 C1orf194Q5T5A4 169 aa9.55□□□□□ -0.88
CTDSPL2-209ENST00000560620 TMEM14EPQ6UXP3 125 aa9.55□□□□□ -0.88
CTDSPL2-209ENST00000560620 CYP2G1PQ6ZSU1 146 aa9.55□□□□□ -0.88
CTDSPL2-209ENST00000560620 NPVFQ9HCQ7 196 aa9.55□□□□□ -0.88
CTDSPL2-209ENST00000560620 DOK5Q9P104 306 aa9.55□□□□□ -0.88
CTDSPL2-209ENST00000560620 A0A0J9YWU9 116 aa9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 PMS2P5A8MQ11 134 aa9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 K7EPK0 472 aa9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 OR5G3P0C626 314 aa9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 ID1P41134 155 aa9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 RAP2BP61225 183 aa9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 IFITM3Q01628 133 aa9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 TEPPQ6URK8 271 aa9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 TMEM182Q6ZP80 229 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 NRARPQ7Z6K4 114 aa9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 LINC00052Q96N35 136 aa9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 RARRES2Q99969 163 aa9.54□□□□□ -0.88
CTDSPL2-209ENST00000560620 INMT-MINDY4F8WBC2 141 aa9.53□□□□□ -0.88
CTDSPL2-209ENST00000560620 GOSR2O14653 212 aa9.53□□□□□ -0.88
CTDSPL2-209ENST00000560620 CST7O76096 145 aa9.53□□□□□ -0.88
CTDSPL2-209ENST00000560620 LINC00869P0C866 280 aa9.53□□□□□ -0.88
CTDSPL2-209ENST00000560620 GALR1P47211 349 aa9.53□□□□□ -0.88
CTDSPL2-209ENST00000560620 SELENOTP62341 195 aa9.53□□□□□ -0.88
CTDSPL2-209ENST00000560620 TMEM217Q8N7C4 229 aa9.53□□□□□ -0.88
CTDSPL2-209ENST00000560620 GATAD1Q8WUU5 269 aa9.53□□□□□ -0.88
CTDSPL2-209ENST00000560620 FAM24AA6NFZ4 105 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 ZNF98A6NK75 572 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 FNDC10F2Z333 226 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 PRAF2O60831 178 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 HYPMO75409 117 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 SPP1P10451 314 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 SLC38A11Q08AI6 406 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 RAB32Q13637 225 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 S100A7AQ86SG5 101 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 TRPT1Q86TN4 253 aaKnown RBP9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 OR11H2Q8NH07 326 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 SLC45A2Q9UMX9 530 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 HIGD1AQ9Y241 93 aa9.52□□□□□ -0.89
CTDSPL2-209ENST00000560620 CXorf65A6NEN9 183 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 SIX6O95475 246 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 RLN2P04090 185 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 NUTF2P61970 127 aaKnown RBP9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 FGL1Q08830 312 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 ARL16Q0P5N6 197 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 PMS2P11Q13670 270 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 MORN3Q6PF18 240 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 ZNF546Q86UE3 836 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 STX12Q86Y82 276 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 C16orf92Q96LL3 132 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 GPR82Q96P67 336 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 RSG1Q9BU20 258 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 GGACTQ9BVM4 153 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 ARL6Q9H0F7 186 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 SLC25A32Q9H2D1 315 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 SEPSECSQ9HD40 501 aaKnown RBP9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 AGRNO00468 2067 aa9.51□□□□□ -0.89
CTDSPL2-209ENST00000560620 KMT2CQ8NEZ4 4911 aaKnown RBP9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 AGPAT2O15120 278 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 SSNA1O43805 119 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 DEDDO75618 318 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 IGKV3-20P01619 116 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 ATF4P18848 351 aaPredicted RBP9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 PSMB3P49720 205 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 MEOX2P50222 304 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 HBG1P69891 147 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 HBG2P69892 147 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 RAB31Q13636 194 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 LRRC37A5PQ49AS3 106 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 TMEM41BQ5BJD5 291 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 SAMD13Q5VXD3 122 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 UHRF2Q96PU4 802 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 SCRT1Q9BWW7 348 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 SLC25A39Q9BZJ4 359 aaPredicted RBP9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 CLEC5AQ9NY25 188 aa9.5□□□□□ -0.89
CTDSPL2-209ENST00000560620 ISLRO14498 428 aa9.49□□□□□ -0.89
CTDSPL2-209ENST00000560620 SULT1A1P50225 295 aa9.49□□□□□ -0.89
CTDSPL2-209ENST00000560620 OR4B1Q8NGF8 309 aa9.49□□□□□ -0.89
CTDSPL2-209ENST00000560620 LRRC20Q8TCA0 184 aa9.49□□□□□ -0.89
CTDSPL2-209ENST00000560620 MARVELD1Q9BSK0 173 aa9.49□□□□□ -0.89
CTDSPL2-209ENST00000560620 RPRMQ9NS64 109 aa9.49□□□□□ -0.89
CTDSPL2-209ENST00000560620 LYRM2Q9NU23 88 aaPredicted RBP9.49□□□□□ -0.89
CTDSPL2-209ENST00000560620 UQCC1Q9NVA1 299 aa9.49□□□□□ -0.89
CTDSPL2-209ENST00000560620 UBE2L5PA0A1B0GUS4 154 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 IGSF23A1L1A6 192 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 H3BMM0 161 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 H3BRN7 92 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 219.4 ms