RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 IL17DQ8TAD2 202 aa8.51□□□□□ -1.05
RABGGTA-216ENST00000560243 PPP1R14BQ96C90 147 aa8.51□□□□□ -1.05
RABGGTA-216ENST00000560243 PLECQ15149 4684 aaKnown RBP8.51□□□□□ -1.05
RABGGTA-216ENST00000560243 DNAH1Q9P2D7 4330 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 LCE6AA0A183 80 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 C5orf51A6NDU8 294 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 TSC22D2O75157 780 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 ORM2P19652 201 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 PMS2P11Q13670 270 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 ZNF846Q147U1 533 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 C1orf194Q5T5A4 169 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 MZT2BQ6NZ67 158 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 OR11H2Q8NH07 326 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 C17orf77Q96MU5 243 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 RARRES2Q99969 163 aa8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 LSM5Q9Y4Y9 91 aaKnown RBP8.5□□□□□ -1.05
RABGGTA-216ENST00000560243 K7EPK0 472 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 SOCS3O14543 225 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 DEFB4AO15263 64 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 NUP62P37198 522 aaPredicted RBP8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 TAS2R30P59541 319 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 SNRPD3P62318 126 aaKnown RBP8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 DLK1P80370 383 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 GDF5OSQ5U4N7 250 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 CYP2G1PQ6ZSU1 146 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 OR8I2Q8N0Y5 310 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 BPIFCQ8NFQ6 507 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 OR1B1Q8NGR6 318 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 GATAD1Q8WUU5 269 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 LINC00052Q96N35 136 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 SCRT1Q9BWW7 348 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 SLC25A32Q9H2D1 315 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 C11orf1Q9H5F2 150 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 SLC25A22Q9H936 323 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 CLEC5AQ9NY25 188 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 DOK5Q9P104 306 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 PFDN2Q9UHV9 154 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 ALMS1Q8TCU4 4167 aa8.49□□□□□ -1.05
RABGGTA-216ENST00000560243 CXorf65A6NEN9 183 aa8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 ZNF98A6NK75 572 aa8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 H3BMM0 161 aa8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 CFDP00746 253 aaPredicted RBP8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 IL5P05113 134 aa8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 SLC38A11Q08AI6 406 aa8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 IL15RAQ13261 267 aa8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 OR10P1Q8NGE3 313 aa8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 C2orf50Q96LR7 162 aa8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 SEPSECSQ9HD40 501 aaKnown RBP8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 FBXL17Q9UF56 701 aa8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 HYDINQ4G0P3 5121 aa8.48□□□□□ -1.05
RABGGTA-216ENST00000560243 FAM24AA6NFZ4 105 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 IGKV3-20P01619 116 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 LINC00869P0C866 280 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 SPP1P10451 314 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 MORN3Q6PF18 240 aaPredicted RBP8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 NRARPQ7Z6K4 114 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 CSNK1G2-AS1Q8NCQ2 148 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 ENKURQ8TC29 256 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 C20orf173Q96LM9 149 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 UHRF2Q96PU4 802 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 RSG1Q9BU20 258 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 TMEM147Q9BVK8 224 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 NPVFQ9HCQ7 196 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 MGAT4CQ9UBM8 478 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 SLC45A2Q9UMX9 530 aa8.47□□□□□ -1.05
RABGGTA-216ENST00000560243 FNDC10F2Z333 226 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 F6UB75 175 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 H3BRN7 92 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 L7N2F9 121 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 DEDDO75618 318 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 CST7O76096 145 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 SIX6O95475 246 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 HLA-DRB4P13762 266 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 PSMB3P49720 205 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 BCAP31P51572 246 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 CAV2P51636 162 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 S100A10P60903 97 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 VAMP2P63027 116 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 RAB32Q13637 225 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 IGFL4Q6B9Z1 124 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 TEPPQ6URK8 271 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 PATE2Q6UY27 113 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 Q8NAQ8 132 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 SHANK2-AS3Q9BTD1 123 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 SLC25A39Q9BZJ4 359 aaPredicted RBP8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 XCL2Q9UBD3 114 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 HLA-DRB4X5D2U9 266 aa8.46□□□□□ -1.06
RABGGTA-216ENST00000560243 IGSF23A1L1A6 192 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 ISLRO14498 428 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 HYPMO75409 117 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 OR5G3P0C626 314 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 RBMY1A1P0DJD3 496 aaKnown RBP8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 RBMY1CP0DJD4 496 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 ATF4P18848 351 aaPredicted RBP8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 ID1P41134 155 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 GALR1P47211 349 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 FXYD7P58549 80 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 PLP1P60201 277 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 NANOS2P60321 138 aaKnown RBP8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 SELENOTP62341 195 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms