RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 DEDDO75618 318 aa9.67□□□□□ -0.86
SMAD3-213ENST00000560175 ZNF688P0C7X2 276 aa9.67□□□□□ -0.86
SMAD3-213ENST00000560175 ARL16Q0P5N6 197 aa9.67□□□□□ -0.86
SMAD3-213ENST00000560175 OR2F1Q13607 317 aa9.67□□□□□ -0.86
SMAD3-213ENST00000560175 C17orf77Q96MU5 243 aa9.67□□□□□ -0.86
SMAD3-213ENST00000560175 PBDC1Q9BVG4 233 aa9.67□□□□□ -0.86
SMAD3-213ENST00000560175 FBXL17Q9UF56 701 aa9.67□□□□□ -0.86
SMAD3-213ENST00000560175 SOCS3O14543 225 aa9.66□□□□□ -0.86
SMAD3-213ENST00000560175 METTL15P1P0C7V9 234 aa9.66□□□□□ -0.86
SMAD3-213ENST00000560175 GATA2P23769 480 aaPredicted RBP9.66□□□□□ -0.86
SMAD3-213ENST00000560175 LYZP61626 148 aa9.66□□□□□ -0.86
SMAD3-213ENST00000560175 SELENOTP62341 195 aa9.66□□□□□ -0.86
SMAD3-213ENST00000560175 CYP2G1PQ6ZSU1 146 aa9.66□□□□□ -0.86
SMAD3-213ENST00000560175 BPIFCQ8NFQ6 507 aa9.66□□□□□ -0.86
SMAD3-213ENST00000560175 OR10P1Q8NGE3 313 aa9.66□□□□□ -0.86
SMAD3-213ENST00000560175 MARVELD1Q9BSK0 173 aa9.66□□□□□ -0.86
SMAD3-213ENST00000560175 DNAH1Q9P2D7 4330 aa9.65□□□□□ -0.86
SMAD3-213ENST00000560175 ZNF98A6NK75 572 aa9.65□□□□□ -0.86
SMAD3-213ENST00000560175 SCGB1D2O95969 90 aa9.65□□□□□ -0.86
SMAD3-213ENST00000560175 SPP1P10451 314 aa9.65□□□□□ -0.86
SMAD3-213ENST00000560175 SNRPD3P62318 126 aaKnown RBP9.65□□□□□ -0.86
SMAD3-213ENST00000560175 AKR1C1Q04828 323 aa9.65□□□□□ -0.86
SMAD3-213ENST00000560175 TMEM41BQ5BJD5 291 aa9.65□□□□□ -0.86
SMAD3-213ENST00000560175 MORN3Q6PF18 240 aaPredicted RBP9.65□□□□□ -0.86
SMAD3-213ENST00000560175 NRARPQ7Z6K4 114 aa9.65□□□□□ -0.86
SMAD3-213ENST00000560175 STHQ8IWL8 128 aa9.65□□□□□ -0.86
SMAD3-213ENST00000560175 CLUHP3Q96NS8 147 aa9.65□□□□□ -0.86
SMAD3-213ENST00000560175 PLECQ15149 4684 aaKnown RBP9.65□□□□□ -0.86
SMAD3-213ENST00000560175 A0A0J9YWU9 116 aa9.64□□□□□ -0.87
SMAD3-213ENST00000560175 C5orf51A6NDU8 294 aa9.64□□□□□ -0.87
SMAD3-213ENST00000560175 EWSR1Q01844 656 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMAD3-213ENST00000560175 PSMG4Q5JS54 123 aa9.64□□□□□ -0.87
SMAD3-213ENST00000560175 ZFAND6Q6FIF0 208 aa9.64□□□□□ -0.87
SMAD3-213ENST00000560175 TEPPQ6URK8 271 aa9.64□□□□□ -0.87
SMAD3-213ENST00000560175 GSG1LQ6UXU4 331 aa9.64□□□□□ -0.87
SMAD3-213ENST00000560175 CSNK1G2-AS1Q8NCQ2 148 aa9.64□□□□□ -0.87
SMAD3-213ENST00000560175 KNCNA6PVL3 124 aa9.63□□□□□ -0.87
SMAD3-213ENST00000560175 H3BMM0 161 aa9.63□□□□□ -0.87
SMAD3-213ENST00000560175 PRAF2O60831 178 aa9.63□□□□□ -0.87
SMAD3-213ENST00000560175 CA1P00915 261 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-213ENST00000560175 PSMB3P49720 205 aa9.63□□□□□ -0.87
SMAD3-213ENST00000560175 SAMD13Q5VXD3 122 aa9.63□□□□□ -0.87
SMAD3-213ENST00000560175 OR8I2Q8N0Y5 310 aa9.63□□□□□ -0.87
SMAD3-213ENST00000560175 ENKURQ8TC29 256 aa9.63□□□□□ -0.87
SMAD3-213ENST00000560175 GPR82Q96P67 336 aa9.63□□□□□ -0.87
SMAD3-213ENST00000560175 RARRES2Q99969 163 aa9.63□□□□□ -0.87
SMAD3-213ENST00000560175 ZNF705EA8MWA4 302 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-213ENST00000560175 FAM25EA8MYX2 175 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 INMT-MINDY4F8WBC2 141 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 H3BRN7 92 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 ISLRO14498 428 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 HLA-DRB4P13762 266 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 ORM2P19652 201 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 S100A7P31151 101 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 MEOX2P50222 304 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 RRAS2P62070 204 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-213ENST00000560175 RAB32Q13637 225 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 VWC2Q2TAL6 325 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 ACTL10Q5JWF8 245 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 PXDC1Q5TGL8 231 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 PATE2Q6UY27 113 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 OR11H2Q8NH07 326 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 SHANK2-AS3Q9BTD1 123 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 TMEM147Q9BVK8 224 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 SLC25A39Q9BZJ4 359 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-213ENST00000560175 SLC25A32Q9H2D1 315 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 C11orf68Q9H3H3 251 aaKnown RBP9.62□□□□□ -0.87
SMAD3-213ENST00000560175 GPN1Q9HCN4 374 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-213ENST00000560175 LYRM2Q9NU23 88 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-213ENST00000560175 MGAT4CQ9UBM8 478 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 LSM5Q9Y4Y9 91 aaKnown RBP9.62□□□□□ -0.87
SMAD3-213ENST00000560175 HLA-DRB4X5D2U9 266 aa9.62□□□□□ -0.87
SMAD3-213ENST00000560175 FAM24AA6NFZ4 105 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 A8MTW9 85 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 L7N2F9 121 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 AGPAT2O15120 278 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 HYPMO75409 117 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 LINC00869P0C866 280 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 C4BPBP20851 252 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 ID1P41134 155 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 GALR1P47211 349 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 VAMP2P63027 116 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 OR1B1Q8NGR6 318 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 CHAC2Q8WUX2 184 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 NMES1Q9C002 83 aa9.61□□□□□ -0.87
SMAD3-213ENST00000560175 SAV1Q9H4B6 383 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-213ENST00000560175 LCE6AA0A183 80 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 SMCO3A2RU48 225 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 MRPS12O15235 138 aaKnown RBP9.6□□□□□ -0.87
SMAD3-213ENST00000560175 PVALBP20472 110 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-213ENST00000560175 SLC38A11Q08AI6 406 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 GDF5OSQ5U4N7 250 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 SPATA31B1PQ5VZV4 182 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 FOXI2Q6ZQN5 318 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 TMEM252Q8N6L7 170 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 TMEM217Q8N7C4 229 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 PPP1R14BQ96C90 147 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 MGST2Q99735 147 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 RSG1Q9BU20 258 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms