RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 SPATA31B1PQ5VZV4 182 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 OR8I2Q8N0Y5 310 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 CLUHP3Q96NS8 147 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 CIB3Q96Q77 187 aaPredicted RBP10.72□□□□□ -0.69
LRRC28-213ENST00000559399 NDUFAF3Q9BU61 184 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 TMED3Q9Y3Q3 217 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 DNAH10Q8IVF4 4471 aa10.72□□□□□ -0.69
LRRC28-213ENST00000559399 HERC2O95714 4834 aa10.71□□□□□ -0.69
LRRC28-213ENST00000559399 IGHV3OR16-12A0A075B7B8 117 aa10.71□□□□□ -0.69
LRRC28-213ENST00000559399 IGKV1OR2-108A0A075B7D4 117 aa10.71□□□□□ -0.69
LRRC28-213ENST00000559399 ISLRO14498 428 aa10.71□□□□□ -0.69
LRRC28-213ENST00000559399 CFDP00746 253 aaPredicted RBP10.71□□□□□ -0.69
LRRC28-213ENST00000559399 SPART-AS1P0CW21 52 aa10.71□□□□□ -0.69
LRRC28-213ENST00000559399 EMP1P54849 157 aa10.71□□□□□ -0.69
LRRC28-213ENST00000559399 RPP30P78346 268 aaKnown RBP10.71□□□□□ -0.69
LRRC28-213ENST00000559399 ZNF709Q8N972 641 aa10.71□□□□□ -0.69
LRRC28-213ENST00000559399 THAP8Q8NA92 274 aa10.71□□□□□ -0.69
LRRC28-213ENST00000559399 OR4B1Q8NGF8 309 aa10.71□□□□□ -0.69
LRRC28-213ENST00000559399 SLC25A21Q9BQT8 299 aaPredicted RBP10.71□□□□□ -0.69
LRRC28-213ENST00000559399 RFNGQ9Y644 331 aa10.71□□□□□ -0.69
LRRC28-213ENST00000559399 V9GYH0 126 aa10.71□□□□□ -0.69
LRRC28-213ENST00000559399 P0DMU3 169 aa10.7□□□□□ -0.7
LRRC28-213ENST00000559399 FAM231AP0DMU4 169 aa10.7□□□□□ -0.7
LRRC28-213ENST00000559399 FAM231CP0DMU5 169 aa10.7□□□□□ -0.7
LRRC28-213ENST00000559399 MEOX2P50222 304 aa10.7□□□□□ -0.7
LRRC28-213ENST00000559399 PAX9P55771 341 aa10.7□□□□□ -0.7
LRRC28-213ENST00000559399 PPP1R1AQ13522 171 aa10.7□□□□□ -0.7
LRRC28-213ENST00000559399 ZNF79Q15937 498 aa10.7□□□□□ -0.7
LRRC28-213ENST00000559399 LCE2DQ5TA82 110 aaPredicted RBP10.7□□□□□ -0.7
LRRC28-213ENST00000559399 GGNBP1Q5YKI7 109 aa10.7□□□□□ -0.7
LRRC28-213ENST00000559399 EBLN2Q6P2I7 272 aa10.7□□□□□ -0.7
LRRC28-213ENST00000559399 DEDD2Q8WXF8 326 aa10.7□□□□□ -0.7
LRRC28-213ENST00000559399 GOLT1BQ9Y3E0 138 aa10.7□□□□□ -0.7
LRRC28-213ENST00000559399 TEX48A0A1B0GUV7 120 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 WRBO00258 174 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 SYNGR2O43760 224 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 SFT2D2O95562 160 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 GALR1P47211 349 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 PSG9Q00887 426 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 GSG1LQ6UXU4 331 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 SCRT1Q9BWW7 348 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 MAGT1Q9H0U3 335 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 SLC35B3Q9H1N7 401 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 SLC45A2Q9UMX9 530 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 HECTD4Q9Y4D8 3996 aa10.69□□□□□ -0.7
LRRC28-213ENST00000559399 A0A0J9YX75 114 aa10.68□□□□□ -0.7
LRRC28-213ENST00000559399 PRSS46E5RG02 174 aa10.68□□□□□ -0.7
LRRC28-213ENST00000559399 F6UB75 175 aa10.68□□□□□ -0.7
LRRC28-213ENST00000559399 S100A5P33763 92 aa10.68□□□□□ -0.7
LRRC28-213ENST00000559399 FAM78BQ5VT40 261 aa10.68□□□□□ -0.7
LRRC28-213ENST00000559399 LINC00336Q6ZUF6 198 aa10.68□□□□□ -0.7
LRRC28-213ENST00000559399 POM121L12Q8N7R1 296 aa10.68□□□□□ -0.7
LRRC28-213ENST00000559399 C16orf92Q96LL3 132 aa10.68□□□□□ -0.7
LRRC28-213ENST00000559399 SLC25A32Q9H2D1 315 aa10.68□□□□□ -0.7
LRRC28-213ENST00000559399 SLC25A22Q9H936 323 aa10.68□□□□□ -0.7
LRRC28-213ENST00000559399 RPRMQ9NS64 109 aa10.68□□□□□ -0.7
LRRC28-213ENST00000559399 ZNF98A6NK75 572 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 H3BP45 60 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 HBE1P02100 147 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 HOXB5P09067 269 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 ORM2P19652 201 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 S100A7P31151 101 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 AKR1C1Q04828 323 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 SPANXN5Q5MJ07 72 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 BPIFCQ8NFQ6 507 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 C20orf173Q96LM9 149 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 C7orf50Q9BRJ6 194 aaKnown RBP10.67□□□□□ -0.7
LRRC28-213ENST00000559399 TMEM147Q9BVK8 224 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 DKK2Q9UBU2 259 aa10.67□□□□□ -0.7
LRRC28-213ENST00000559399 FAM222AQ5U5X8 452 aa10.66□□□□□ -0.7
LRRC28-213ENST00000559399 ACOT7LQ6ZUV0 252 aa10.66□□□□□ -0.7
LRRC28-213ENST00000559399 OR4D5Q8NGN0 318 aa10.66□□□□□ -0.7
LRRC28-213ENST00000559399 OR1B1Q8NGR6 318 aa10.66□□□□□ -0.7
LRRC28-213ENST00000559399 FAM210BQ96KR6 192 aa10.66□□□□□ -0.7
LRRC28-213ENST00000559399 GPR82Q96P67 336 aa10.66□□□□□ -0.7
LRRC28-213ENST00000559399 NIPSNAP3BQ9BS92 247 aa10.66□□□□□ -0.7
LRRC28-213ENST00000559399 RSG1Q9BU20 258 aa10.66□□□□□ -0.7
LRRC28-213ENST00000559399 DOK5Q9P104 306 aa10.66□□□□□ -0.7
LRRC28-213ENST00000559399 STRAPQ9Y3F4 350 aaKnown RBP10.66□□□□□ -0.7
LRRC28-213ENST00000559399 LOC102723971A0A1B0GUV8 181 aa10.65□□□□□ -0.7
LRRC28-213ENST00000559399 CCDC160A6NGH7 325 aa10.65□□□□□ -0.7
LRRC28-213ENST00000559399 GATA2P23769 480 aaPredicted RBP10.65□□□□□ -0.7
LRRC28-213ENST00000559399 UBE2MP61081 183 aaKnown RBP10.65□□□□□ -0.7
LRRC28-213ENST00000559399 TMEM182Q6ZP80 229 aaPredicted RBP10.65□□□□□ -0.7
LRRC28-213ENST00000559399 CCDC190Q86UF4 302 aa10.65□□□□□ -0.7
LRRC28-213ENST00000559399 C1orf158Q8N1D5 194 aa10.65□□□□□ -0.7
LRRC28-213ENST00000559399 YTHDF2Q9Y5A9 579 aaKnown RBP10.65□□□□□ -0.7
LRRC28-213ENST00000559399 AGRNO00468 2067 aa10.65□□□□□ -0.7
LRRC28-213ENST00000559399 DNAH6Q9C0G6 4158 aa10.64□□□□□ -0.71
LRRC28-213ENST00000559399 A8MTW9 85 aa10.64□□□□□ -0.71
LRRC28-213ENST00000559399 RRN3P1Q2M238 152 aa10.64□□□□□ -0.71
LRRC28-213ENST00000559399 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.64□□□□□ -0.71
LRRC28-213ENST00000559399 IGF2BP2-AS1Q96M15 143 aa10.64□□□□□ -0.71
LRRC28-213ENST00000559399 C17orf77Q96MU5 243 aa10.64□□□□□ -0.71
LRRC28-213ENST00000559399 TMEM208Q9BTX3 173 aa10.64□□□□□ -0.71
LRRC28-213ENST00000559399 KRTAP17-1Q9BYP8 105 aa10.64□□□□□ -0.71
LRRC28-213ENST00000559399 C9orf170A2RU37 121 aa10.63□□□□□ -0.71
LRRC28-213ENST00000559399 SMCO3A2RU48 225 aa10.63□□□□□ -0.71
LRRC28-213ENST00000559399 ADAP1O75689 374 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms