RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 BUB3O43684 328 aa16.3■□□□□ 0.2
SNX1-206ENST00000559389 PRB2P02812 416 aaPredicted RBP16.3■□□□□ 0.2
SNX1-206ENST00000559389 ORM2P19652 201 aa16.3■□□□□ 0.2
SNX1-206ENST00000559389 RPL29P47914 159 aaKnown RBP16.3■□□□□ 0.2
SNX1-206ENST00000559389 PXDC1Q5TGL8 231 aa16.3■□□□□ 0.2
SNX1-206ENST00000559389 MIC13Q5XKP0 118 aa16.3■□□□□ 0.2
SNX1-206ENST00000559389 LAMTOR1Q6IAA8 161 aa16.3■□□□□ 0.2
SNX1-206ENST00000559389 C16orf54Q6UWD8 224 aa16.3■□□□□ 0.2
SNX1-206ENST00000559389 TCF24Q7RTU0 167 aa16.3■□□□□ 0.2
SNX1-206ENST00000559389 GLMPQ8WWB7 406 aa16.3■□□□□ 0.2
SNX1-206ENST00000559389 DOK5Q9P104 306 aa16.3■□□□□ 0.2
SNX1-206ENST00000559389 PFDN2Q9UHV9 154 aa16.3■□□□□ 0.2
SNX1-206ENST00000559389 ZNF785A8K8V0 405 aa16.29■□□□□ 0.2
SNX1-206ENST00000559389 TSPAN4O14817 238 aa16.29■□□□□ 0.2
SNX1-206ENST00000559389 ARPC5O15511 151 aa16.29■□□□□ 0.2
SNX1-206ENST00000559389 CD5P06127 495 aa16.29■□□□□ 0.2
SNX1-206ENST00000559389 RBPMS2Q6ZRY4 209 aaKnown RBP16.29■□□□□ 0.2
SNX1-206ENST00000559389 TCTE3Q8IZS6 198 aa16.29■□□□□ 0.2
SNX1-206ENST00000559389 SPAG8Q99932 426 aaPredicted RBP16.29■□□□□ 0.2
SNX1-206ENST00000559389 PARD6GQ9BYG4 376 aaPredicted RBP16.29■□□□□ 0.2
SNX1-206ENST00000559389 GUCA2BQ16661 112 aa16.28■□□□□ 0.2
SNX1-206ENST00000559389 OR11H4Q8NGC9 324 aa16.28■□□□□ 0.2
SNX1-206ENST00000559389 ARL6Q9H0F7 186 aa16.28■□□□□ 0.2
SNX1-206ENST00000559389 PXMP4Q9Y6I8 212 aa16.28■□□□□ 0.2
SNX1-206ENST00000559389 H3BRN7 92 aa16.27■□□□□ 0.2
SNX1-206ENST00000559389 HYPMO75409 117 aa16.27■□□□□ 0.2
SNX1-206ENST00000559389 IFNA5P01569 189 aa16.27■□□□□ 0.2
SNX1-206ENST00000559389 B2MP61769 119 aa16.27■□□□□ 0.2
SNX1-206ENST00000559389 DEFA6Q01524 100 aa16.27■□□□□ 0.2
SNX1-206ENST00000559389 AKAP14Q86UN6 197 aa16.27■□□□□ 0.2
SNX1-206ENST00000559389 PPP1R14BQ96C90 147 aa16.27■□□□□ 0.2
SNX1-206ENST00000559389 NEURL2Q9BR09 285 aa16.27■□□□□ 0.2
SNX1-206ENST00000559389 KCNIP2Q9NS61 270 aa16.27■□□□□ 0.2
SNX1-206ENST00000559389 SLC39A9Q9NUM3 307 aa16.27■□□□□ 0.2
SNX1-206ENST00000559389 HIGD1AQ9Y241 93 aa16.27■□□□□ 0.2
SNX1-206ENST00000559389 OR5G3P0C626 314 aa16.26■□□□□ 0.19
SNX1-206ENST00000559389 AP2S1P53680 142 aaPredicted RBP16.26■□□□□ 0.19
SNX1-206ENST00000559389 ZNF266Q14584 549 aa16.26■□□□□ 0.19
SNX1-206ENST00000559389 C1orf194Q5T5A4 169 aa16.26■□□□□ 0.19
SNX1-206ENST00000559389 PATE2Q6UY27 113 aa16.26■□□□□ 0.19
SNX1-206ENST00000559389 SHANK2-AS3Q9BTD1 123 aa16.26■□□□□ 0.19
SNX1-206ENST00000559389 RSG1Q9BU20 258 aa16.26■□□□□ 0.19
SNX1-206ENST00000559389 MFFQ9GZY8 342 aa16.26■□□□□ 0.19
SNX1-206ENST00000559389 ARV1Q9H2C2 271 aa16.26■□□□□ 0.19
SNX1-206ENST00000559389 HELTA6NFD8 242 aa16.25■□□□□ 0.19
SNX1-206ENST00000559389 HMSDA8MTL9 139 aa16.25■□□□□ 0.19
SNX1-206ENST00000559389 S100A7P31151 101 aa16.25■□□□□ 0.19
SNX1-206ENST00000559389 ZNF345Q14585 488 aa16.25■□□□□ 0.19
SNX1-206ENST00000559389 ZNF709Q8N972 641 aa16.25■□□□□ 0.19
SNX1-206ENST00000559389 SCGB1C1Q8TD33 95 aa16.25■□□□□ 0.19
SNX1-206ENST00000559389 UHRF2Q96PU4 802 aa16.25■□□□□ 0.19
SNX1-206ENST00000559389 SCRT1Q9BWW7 348 aa16.25■□□□□ 0.19
SNX1-206ENST00000559389 SLC25A39Q9BZJ4 359 aaPredicted RBP16.25■□□□□ 0.19
SNX1-206ENST00000559389 IGKV3-7A0A075B6H7 116 aa16.24■□□□□ 0.19
SNX1-206ENST00000559389 ZNF98A6NK75 572 aa16.24■□□□□ 0.19
SNX1-206ENST00000559389 C17orf112F2Z3M2 114 aa16.24■□□□□ 0.19
SNX1-206ENST00000559389 K7EIL1 84 aa16.24■□□□□ 0.19
SNX1-206ENST00000559389 COX7A2P2O60397 106 aa16.24■□□□□ 0.19
SNX1-206ENST00000559389 Q6ZRG5 221 aa16.24■□□□□ 0.19
SNX1-206ENST00000559389 GTSCR1Q86UQ5 136 aa16.24■□□□□ 0.19
SNX1-206ENST00000559389 NBEAL1Q6ZS30 2694 aa16.24■□□□□ 0.19
SNX1-206ENST00000559389 NOTCH1P46531 2555 aa16.24■□□□□ 0.19
SNX1-206ENST00000559389 ELOA3CA0A087WX78 387 aaPredicted RBP16.23■□□□□ 0.19
SNX1-206ENST00000559389 TRAV2A0A0B4J234 112 aa16.23■□□□□ 0.19
SNX1-206ENST00000559389 OR4C46A6NHA9 309 aa16.23■□□□□ 0.19
SNX1-206ENST00000559389 SIGLEC15Q6ZMC9 328 aa16.23■□□□□ 0.19
SNX1-206ENST00000559389 S100A7AQ86SG5 101 aa16.23■□□□□ 0.19
SNX1-206ENST00000559389 TMEM37Q8WXS4 190 aa16.23■□□□□ 0.19
SNX1-206ENST00000559389 SLC25A32Q9H2D1 315 aa16.23■□□□□ 0.19
SNX1-206ENST00000559389 FBN3Q75N90 2809 aa16.23■□□□□ 0.19
SNX1-206ENST00000559389 CD7P09564 240 aa16.22■□□□□ 0.19
SNX1-206ENST00000559389 CD81P60033 236 aa16.22■□□□□ 0.19
SNX1-206ENST00000559389 RPL11P62913 178 aaKnown RBP16.22■□□□□ 0.19
SNX1-206ENST00000559389 C10orf113Q5VZT2 155 aa16.22■□□□□ 0.19
SNX1-206ENST00000559389 GBGT1Q8N5D6 347 aa16.22■□□□□ 0.19
SNX1-206ENST00000559389 KCNRGQ8N5I3 272 aa16.22■□□□□ 0.19
SNX1-206ENST00000559389 OR1L4Q8NGR5 311 aa16.22■□□□□ 0.19
SNX1-206ENST00000559389 PFDN5Q99471 154 aa16.22■□□□□ 0.19
SNX1-206ENST00000559389 MS4A6AQ9H2W1 248 aa16.22■□□□□ 0.19
SNX1-206ENST00000559389 SLC25A22Q9H936 323 aa16.22■□□□□ 0.19
SNX1-206ENST00000559389 PAFAH1B2P68402 229 aa16.21■□□□□ 0.19
SNX1-206ENST00000559389 LEMD1Q68G75 181 aa16.21■□□□□ 0.19
SNX1-206ENST00000559389 LINC00305Q7Z4B0 112 aa16.21■□□□□ 0.19
SNX1-206ENST00000559389 OR8I2Q8N0Y5 310 aa16.21■□□□□ 0.19
SNX1-206ENST00000559389 Q8N1Y9 231 aa16.21■□□□□ 0.19
SNX1-206ENST00000559389 STXBP6Q8NFX7 210 aa16.21■□□□□ 0.19
SNX1-206ENST00000559389 TIMM9Q9Y5J7 89 aa16.21■□□□□ 0.19
SNX1-206ENST00000559389 TAAR5O14804 337 aa16.2■□□□□ 0.18
SNX1-206ENST00000559389 C1QBP02746 253 aa16.2■□□□□ 0.18
SNX1-206ENST00000559389 TFPI2P48307 235 aa16.2■□□□□ 0.18
SNX1-206ENST00000559389 CD300CQ08708 224 aa16.2■□□□□ 0.18
SNX1-206ENST00000559389 RPL7L1Q6DKI1 246 aaKnown RBP16.2■□□□□ 0.18
SNX1-206ENST00000559389 HSD17B11Q8NBQ5 300 aa16.2■□□□□ 0.18
SNX1-206ENST00000559389 GATAD1Q8WUU5 269 aa16.2■□□□□ 0.18
SNX1-206ENST00000559389 GPR82Q96P67 336 aa16.2■□□□□ 0.18
SNX1-206ENST00000559389 DNAJC4Q9NNZ3 241 aa16.2■□□□□ 0.18
SNX1-206ENST00000559389 RNF24Q9Y225 148 aa16.2■□□□□ 0.18
SNX1-206ENST00000559389 SORL1Q92673 2214 aa16.2■□□□□ 0.18
SNX1-206ENST00000559389 BORCS7-ASMTA0A0B4J1R7 106 aa16.19■□□□□ 0.18
SNX1-206ENST00000559389 K7EQG2 157 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms