RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SLC45A2Q9UMX9 530 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 TP53TG1Q9Y2A0 90 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 TENM3Q9P273 2699 aa3.25□□□□□ -1.89
SNX1-205ENST00000559339 STAB2Q8WWQ8 2551 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 C7orf66A4D0T2 115 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 FNDC10F2Z333 226 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 K7EQG2 157 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 CCSO14618 274 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 GOSR2O14653 212 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 SPRY2O43597 315 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 PRAF2O60831 178 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 MBPP02686 304 aaPredicted RBP3.24□□□□□ -1.89
SNX1-205ENST00000559339 RLN2P04090 185 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 OR5G3P0C626 314 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 METTL15P1P0C7V9 234 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 ZNF688P0C7X2 276 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 PET100P0DJ07 73 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 ORM2P19652 201 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 GALR1P47211 349 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 MEOX2P50222 304 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 S100A10P60903 97 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 RRAS2P62070 204 aaPredicted RBP3.24□□□□□ -1.89
SNX1-205ENST00000559339 SELENOTP62341 195 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 HBG1P69891 147 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 HBG2P69892 147 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 DLK1P80370 383 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 CYCSP99999 105 aaKnown RBP3.24□□□□□ -1.89
SNX1-205ENST00000559339 OR2F1Q13607 317 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 DEFB135Q30KP9 77 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 PSMG4Q5JS54 123 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 LEMD1Q68G75 181 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 TEPPQ6URK8 271 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 C16orf54Q6UWD8 224 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 TMEM14EPQ6UXP3 125 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 Q6ZRG5 221 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 NRARPQ7Z6K4 114 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 STX12Q86Y82 276 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 THAP8Q8NA92 274 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 OR1B1Q8NGR6 318 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 DCANP1Q8TF63 244 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 GATAD1Q8WUU5 269 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 GLMPQ8WWB7 406 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 C2orf50Q96LR7 162 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 GPR82Q96P67 336 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 SEC22CQ9BRL7 303 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 SLC25A22Q9H936 323 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 SEPSECSQ9HD40 501 aaKnown RBP3.24□□□□□ -1.89
SNX1-205ENST00000559339 RETNQ9HD89 108 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 LSM5Q9Y4Y9 91 aaKnown RBP3.24□□□□□ -1.89
SNX1-205ENST00000559339 U3KQE9 123 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 DNAH3Q8TD57 4116 aa3.24□□□□□ -1.89
SNX1-205ENST00000559339 COL7A1Q02388 2944 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 IGKV1D-37A0A075B6S9 117 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 IGKV1OR2-108A0A075B7D4 117 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 PRSS46E5RG02 174 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 INMT-MINDY4F8WBC2 141 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 ISLRO14498 428 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 SSNA1O43805 119 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 HYPMO75409 117 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 DEDDO75618 318 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 CA1P00915 261 aaPredicted RBP3.23□□□□□ -1.89
SNX1-205ENST00000559339 LINC00869P0C866 280 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 SPP1P10451 314 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 RPL7P18124 248 aaKnown RBP3.23□□□□□ -1.89
SNX1-205ENST00000559339 S100A11P31949 105 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 ACTL10Q5JWF8 245 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 CASC10Q5T4H9 136 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 PXDC1Q5TGL8 231 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 MORN3Q6PF18 240 aaPredicted RBP3.23□□□□□ -1.89
SNX1-205ENST00000559339 CYP2G1PQ6ZSU1 146 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 ZNF546Q86UE3 836 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 LRRC20Q8TCA0 184 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 RNF183Q96D59 192 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 C16orf92Q96LL3 132 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 LINC00052Q96N35 136 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 RARRES2Q99969 163 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 OVOL2Q9BRP0 275 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 MARVELD1Q9BSK0 173 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 C1QTNF4Q9BXJ3 329 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 EDA2RQ9HAV5 297 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 LYRM2Q9NU23 88 aaPredicted RBP3.23□□□□□ -1.89
SNX1-205ENST00000559339 HIGD1AQ9Y241 93 aa3.23□□□□□ -1.89
SNX1-205ENST00000559339 RCL1Q9Y2P8 373 aaKnown RBP3.23□□□□□ -1.89
SNX1-205ENST00000559339 NBEAL2Q6ZNJ1 2754 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 A0A0J9YWU9 116 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 ZNF98A6NK75 572 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 PMS2P5A8MQ11 134 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 E5RGE8 158 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 K7EPK0 472 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 AGPAT2O15120 278 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 CST7O76096 145 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 ATF4P18848 351 aaPredicted RBP3.22□□□□□ -1.89
SNX1-205ENST00000559339 GATA2P23769 480 aaPredicted RBP3.22□□□□□ -1.89
SNX1-205ENST00000559339 CAMLGP49069 296 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 PSMB3P49720 205 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 SULT1A1P50225 295 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 PAX9P55771 341 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 PLP1P60201 277 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 SLC38A11Q08AI6 406 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 RAB32Q13637 225 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms