RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 ACY3Q96HD9 319 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 UHRF2Q96PU4 802 aa12.47□□□□□ -0.41
CDC42BPB-204ENST00000559043 ELOA3CA0A087WX78 387 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 IGLC7A0M8Q6 106 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 PGPEP1LA6NFU8 196 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 C9JCJ5 164 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 PPP5D1E7EU14 171 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 FAM3BP58499 235 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 KCNIP4Q6PIL6 250 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 TMEM86BQ8N661 226 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 C5orf56Q8N8D9 126 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 OR5T1Q8NG75 326 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 SFRP2Q96HF1 295 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 RNF2Q99496 336 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 SIGLEC9Q9Y336 463 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 LY96Q9Y6Y9 160 aa12.46□□□□□ -0.41
CDC42BPB-204ENST00000559043 IGKV1D-37A0A075B6S9 117 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 C8orf88P0DMB2 117 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 S100A12P80511 92 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 SSBP2P81877 361 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 C5orf64Q2M2E5 130 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 MRPL41Q8IXM3 137 aaKnown RBP12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 OCC1Q8TAD7 63 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 AURKAIP1Q9NWT8 199 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 PITPNC1Q9UKF7 332 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 A0A1W2PPQ1 181 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 TCRBV4S1A1TA0A5B7 111 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 LINC01548A6NM66 108 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 FOXL1Q12952 345 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 NPIPB3Q92617 1050 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 DNAJC4Q9NNZ3 241 aa12.45□□□□□ -0.42
CDC42BPB-204ENST00000559043 FAM181BA6NEQ2 426 aa12.44□□□□□ -0.42
CDC42BPB-204ENST00000559043 CRYGCP07315 174 aa12.44□□□□□ -0.42
CDC42BPB-204ENST00000559043 HIST3H2BBQ8N257 126 aa12.44□□□□□ -0.42
CDC42BPB-204ENST00000559043 FAM167A-AS1Q96KT0 104 aa12.44□□□□□ -0.42
CDC42BPB-204ENST00000559043 MOB4Q9Y3A3 225 aa12.44□□□□□ -0.42
CDC42BPB-204ENST00000559043 OR7C2O60412 319 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 RPL27AP46776 148 aaKnown RBP12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 COMPP49747 757 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 SELENOTP62341 195 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 TEX38Q6PEX7 206 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 PPP1R27Q86WC6 154 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 BTF3L4Q96K17 158 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 HSPB9Q9BQS6 159 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 SLC25A2Q9BXI2 301 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 GAR1Q9NY12 217 aaKnown RBP12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 MRPL36Q9P0J6 103 aaKnown RBP12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 A0A1W2PRE2 83 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 REG1AP05451 166 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 ACTL10Q5JWF8 245 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 GFI1BQ5VTD9 330 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 ETFRF1Q6IPR1 90 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 OR1L4Q8NGR5 311 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 PFDN5Q99471 154 aa12.43□□□□□ -0.42
CDC42BPB-204ENST00000559043 K7EN84 100 aa12.42□□□□□ -0.42
CDC42BPB-204ENST00000559043 TCF21O43680 179 aa12.42□□□□□ -0.42
CDC42BPB-204ENST00000559043 RNASE1P07998 156 aaKnown RBP12.42□□□□□ -0.42
CDC42BPB-204ENST00000559043 MFAP2P55001 183 aa12.42□□□□□ -0.42
CDC42BPB-204ENST00000559043 ZNF90Q03938 601 aa12.42□□□□□ -0.42
CDC42BPB-204ENST00000559043 TNXAQ16473 311 aa12.42□□□□□ -0.42
CDC42BPB-204ENST00000559043 MORN5Q5VZ52 161 aa12.42□□□□□ -0.42
CDC42BPB-204ENST00000559043 LURAP1LQ8IV03 231 aa12.42□□□□□ -0.42
CDC42BPB-204ENST00000559043 C1RLQ9NZP8 487 aa12.42□□□□□ -0.42
CDC42BPB-204ENST00000559043 C2CD3Q4AC94 2353 aa12.42□□□□□ -0.42
CDC42BPB-204ENST00000559043 GGTLC3B5MD39 225 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 S100A2P29034 98 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 PATE2Q6UY27 113 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 PRIMA1Q86XR5 153 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 OR10G8Q8NGN5 311 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 IGHV7-81A0A0B4J1V7 117 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 OR10J4P0C629 311 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 CRYBB3P26998 211 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 CX3CL1P78423 397 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 NDPQ00604 133 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 PLGLAQ15195 96 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 COA6Q5JTJ3 125 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 OR1P1Q8NH06 330 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 RASL11BQ9BPW5 248 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 GPR61Q9BZJ8 451 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 NIT2Q9NQR4 276 aa12.41□□□□□ -0.42
CDC42BPB-204ENST00000559043 TEX22C9J3V5 150 aa12.4□□□□□ -0.42
CDC42BPB-204ENST00000559043 CORTO00230 105 aa12.4□□□□□ -0.42
CDC42BPB-204ENST00000559043 COX7A2P2O60397 106 aa12.4□□□□□ -0.42
CDC42BPB-204ENST00000559043 IGHV3-48P01763 117 aa12.4□□□□□ -0.42
CDC42BPB-204ENST00000559043 EGR2P11161 476 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPB-204ENST00000559043 C10orf113Q5VZT2 155 aa12.4□□□□□ -0.42
CDC42BPB-204ENST00000559043 TMEM116Q8NCL8 245 aa12.4□□□□□ -0.42
CDC42BPB-204ENST00000559043 SGMS2Q8NHU3 365 aa12.4□□□□□ -0.42
CDC42BPB-204ENST00000559043 TRAV5A0A0B4J249 113 aa12.39□□□□□ -0.43
CDC42BPB-204ENST00000559043 HELTA6NFD8 242 aa12.39□□□□□ -0.43
CDC42BPB-204ENST00000559043 HLA-DRB1P01911 266 aa12.39□□□□□ -0.43
CDC42BPB-204ENST00000559043 RPL15P61313 204 aaKnown RBP12.39□□□□□ -0.43
CDC42BPB-204ENST00000559043 OR5AU1Q8NGC0 362 aa12.39□□□□□ -0.43
CDC42BPB-204ENST00000559043 TRGV9Q99603 122 aa12.39□□□□□ -0.43
CDC42BPB-204ENST00000559043 ZNF702PQ9H963 129 aa12.39□□□□□ -0.43
CDC42BPB-204ENST00000559043 ZNF355PQ9NSJ1 428 aa12.39□□□□□ -0.43
CDC42BPB-204ENST00000559043 ZNF562Q6V9R5 426 aa12.39□□□□□ -0.43
CDC42BPB-204ENST00000559043 MISP3Q96FF7 219 aa12.39□□□□□ -0.43
CDC42BPB-204ENST00000559043 F11RQ9Y624 299 aaKnown RBP12.39□□□□□ -0.43
CDC42BPB-204ENST00000559043 TRAV9-1A0A075B6T8 112 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms