RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 GRAMD2BQ96HH9 432 aa5.03□□□□□ -1.6
CHRNA3-204ENST00000559002 ZNF414Q96IQ9 312 aa5.03□□□□□ -1.6
CHRNA3-204ENST00000559002 PFDN5Q99471 154 aa5.03□□□□□ -1.6
CHRNA3-204ENST00000559002 RSG1Q9BU20 258 aa5.03□□□□□ -1.6
CHRNA3-204ENST00000559002 GPR61Q9BZJ8 451 aa5.03□□□□□ -1.6
CHRNA3-204ENST00000559002 TMEM231Q9H6L2 316 aa5.03□□□□□ -1.6
CHRNA3-204ENST00000559002 SLC39A9Q9NUM3 307 aa5.03□□□□□ -1.6
CHRNA3-204ENST00000559002 MRPL27Q9P0M9 148 aaKnown RBP5.03□□□□□ -1.6
CHRNA3-204ENST00000559002 HIGD1AQ9Y241 93 aa5.03□□□□□ -1.6
CHRNA3-204ENST00000559002 TIMM9Q9Y5J7 89 aa5.03□□□□□ -1.6
CHRNA3-204ENST00000559002 NOTCH3Q9UM47 2321 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 NOTCH1P46531 2555 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 IGHV3OR16-13A0A075B7E8 117 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 ELOA3CA0A087WX78 387 aaPredicted RBP5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 IGHV3-49A0A0A0MS15 119 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 IGHV3-74A0A0B4J1X5 117 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 IGHV3-66A0A0C4DH42 116 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 CSN3P07498 182 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 FOLR2P14207 255 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 CRYBB3P26998 211 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 INSL3P51460 131 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 PLP1P60201 277 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 PRR20EP86478 221 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 PRR20CP86479 221 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 PRR20DP86480 221 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 PRR20BP86481 221 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 PRR20AP86496 221 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 FFAR4Q5NUL3 377 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 C9orf66Q5T8R8 295 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 C10orf113Q5VZT2 155 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 LAMTOR1Q6IAA8 161 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 WFDC9Q8NEX5 89 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 PSMG3Q9BT73 122 aaPredicted RBP5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 RHPN1-AS1Q9BWJ2 59 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 ARV1Q9H2C2 271 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 CYTL1Q9NRR1 136 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 SMPXQ9UHP9 88 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 RNF24Q9Y225 148 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 RFNGQ9Y644 331 aa5.02□□□□□ -1.61
CHRNA3-204ENST00000559002 HELTA6NFD8 242 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 H3BRN7 92 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 CHEK1O14757 476 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 MBP02144 154 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 IGLL1P15814 213 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 EDN2P20800 178 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 CBLN1P23435 193 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 SERF2P84101 59 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 ACOT6Q3I5F7 207 aaPredicted RBP5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 AKR1C8PQ5T2L2 129 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 LINC00305Q7Z4B0 112 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 SLC51BQ86UW2 128 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 BAP18Q8IXM2 172 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 OR2G3Q8NGZ4 309 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 STOML3Q8TAV4 291 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 GATAD1Q8WUU5 269 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 ST8SIA2Q92186 375 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 UHRF2Q96PU4 802 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 RNF2Q99496 336 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 SLC25A39Q9BZJ4 359 aaPredicted RBP5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 SH3BGRL3Q9H299 93 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 SLC25A32Q9H2D1 315 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 SLC25A22Q9H936 323 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 DNAJC4Q9NNZ3 241 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 SIGLEC8Q9NYZ4 499 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 TECRQ9NZ01 308 aaKnown RBP5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 BOLA1Q9Y3E2 137 aa5.01□□□□□ -1.61
CHRNA3-204ENST00000559002 DNAH3Q8TD57 4116 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 ZNF98A6NK75 572 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 BUB3O43684 328 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 APOHP02749 345 aaPredicted RBP5□□□□□ -1.61
CHRNA3-204ENST00000559002 CD5P06127 495 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 C8orf88P0DMB2 117 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 M6PRP20645 277 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 RAB2AP61019 212 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 RHOBP62745 196 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 RPL11P62913 178 aaKnown RBP5□□□□□ -1.61
CHRNA3-204ENST00000559002 TMEM41BQ5BJD5 291 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 GCSAMLQ5JQS6 135 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 C1orf194Q5T5A4 169 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 FAM78BQ5VT40 261 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 LEMD1Q68G75 181 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 EIF5AL1Q6IS14 154 aaKnown RBP5□□□□□ -1.61
CHRNA3-204ENST00000559002 LCN12Q6JVE5 192 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 FAM122CQ6P4D5 195 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 PATE2Q6UY27 113 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 IL34Q6ZMJ4 242 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 ADAMTSL5Q6ZMM2 481 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 RBPMS2Q6ZRY4 209 aaKnown RBP5□□□□□ -1.61
CHRNA3-204ENST00000559002 TCF24Q7RTU0 167 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 OR8I2Q8N0Y5 310 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 OR10G4Q8NGN3 311 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 OR10G9Q8NGN4 311 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 OR10G7Q8NGN6 311 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 OR2K2Q8NGT1 345 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 TMEM37Q8WXS4 190 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 GPR82Q96P67 336 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 SHANK2-AS3Q9BTD1 123 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 SCRT1Q9BWW7 348 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 MRPL32Q9BYC8 188 aaKnown RBP5□□□□□ -1.61
CHRNA3-204ENST00000559002 VSIRQ9H7M9 311 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms