RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 C20orf24Q9BUV8 137 aa13.83□□□□□ -0.2
CLPX-203ENST00000558958 ZNF747Q9BV97 191 aa13.83□□□□□ -0.2
CLPX-203ENST00000558958 UBQLN2Q9UHD9 624 aa13.83□□□□□ -0.2
CLPX-203ENST00000558958 HIGD1AQ9Y241 93 aa13.83□□□□□ -0.2
CLPX-203ENST00000558958 ZNF320A2RRD8 509 aa13.82□□□□□ -0.2
CLPX-203ENST00000558958 RNF141Q8WVD5 230 aa13.82□□□□□ -0.2
CLPX-203ENST00000558958 SEPSECSQ9HD40 501 aaKnown RBP13.82□□□□□ -0.2
CLPX-203ENST00000558958 COL6A5A8TX70 2615 aa13.81□□□□□ -0.2
CLPX-203ENST00000558958 SEC14L6B5MCN3 397 aa13.81□□□□□ -0.2
CLPX-203ENST00000558958 LGALS9O00182 355 aa13.81□□□□□ -0.2
CLPX-203ENST00000558958 SYNJ2BPP57105 145 aa13.81□□□□□ -0.2
CLPX-203ENST00000558958 FAM78BQ5VT40 261 aa13.81□□□□□ -0.2
CLPX-203ENST00000558958 DPPA3Q6W0C5 159 aa13.81□□□□□ -0.2
CLPX-203ENST00000558958 ZNF767PQ75MW2 155 aa13.81□□□□□ -0.2
CLPX-203ENST00000558958 REC114Q7Z4M0 266 aa13.81□□□□□ -0.2
CLPX-203ENST00000558958 C1QL4Q86Z23 238 aa13.81□□□□□ -0.2
CLPX-203ENST00000558958 UHRF2Q96PU4 802 aa13.81□□□□□ -0.2
CLPX-203ENST00000558958 RABAC1Q9UI14 185 aa13.81□□□□□ -0.2
CLPX-203ENST00000558958 ZNF207O43670 478 aaKnown RBP13.8□□□□□ -0.2
CLPX-203ENST00000558958 RHOBP62745 196 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 ZNF726P1Q15940 193 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 SPATA31B1PQ5VZV4 182 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 FAM122CQ6P4D5 195 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 C12orf54Q6X4T0 127 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 LINC00305Q7Z4B0 112 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 FAM213BQ8TBF2 198 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 METTL26Q96S19 204 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 RNF2Q99496 336 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 ACTR3CQ9C0K3 210 aaPredicted RBP13.8□□□□□ -0.2
CLPX-203ENST00000558958 FUT9Q9Y231 359 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 A0A1W2PPV4 95 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 A8MWP6 167 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 K7EMT4 169 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 NPPCP23582 126 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 CRYBB3P26998 211 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 MYCNOSP40205 109 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 CDC34P49427 236 aaPredicted RBP13.8□□□□□ -0.2
CLPX-203ENST00000558958 MORN5Q5VZ52 161 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 C3orf56Q8N813 242 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 DLX4Q92988 240 aaPredicted RBP13.8□□□□□ -0.2
CLPX-203ENST00000558958 SHANK2-AS3Q9BTD1 123 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 MRPL32Q9BYC8 188 aaKnown RBP13.8□□□□□ -0.2
CLPX-203ENST00000558958 SLC25A39Q9BZJ4 359 aaPredicted RBP13.8□□□□□ -0.2
CLPX-203ENST00000558958 SLC25A22Q9H936 323 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 DAZ1Q9NQZ3 744 aaKnown RBP13.8□□□□□ -0.2
CLPX-203ENST00000558958 UFC1Q9Y3C8 167 aa13.8□□□□□ -0.2
CLPX-203ENST00000558958 ZNF705EA8MWA4 302 aaPredicted RBP13.79□□□□□ -0.2
CLPX-203ENST00000558958 H3BRN7 92 aa13.79□□□□□ -0.2
CLPX-203ENST00000558958 RGS13O14921 159 aa13.79□□□□□ -0.2
CLPX-203ENST00000558958 TM4SF20Q53R12 229 aa13.79□□□□□ -0.2
CLPX-203ENST00000558958 MIR17HGQ75NE6 70 aa13.79□□□□□ -0.2
CLPX-203ENST00000558958 SSX7Q7RTT5 188 aa13.79□□□□□ -0.2
CLPX-203ENST00000558958 S100A7AQ86SG5 101 aa13.79□□□□□ -0.2
CLPX-203ENST00000558958 RAB24Q969Q5 203 aa13.79□□□□□ -0.2
CLPX-203ENST00000558958 U3KQE9 123 aa13.79□□□□□ -0.2
CLPX-203ENST00000558958 CTXND1A0A1B0GTU2 59 aa13.78□□□□□ -0.2
CLPX-203ENST00000558958 EIF3GO75821 320 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLPX-203ENST00000558958 LRRC20Q8TCA0 184 aa13.78□□□□□ -0.2
CLPX-203ENST00000558958 SAT2Q96F10 170 aaPredicted RBP13.78□□□□□ -0.2
CLPX-203ENST00000558958 TRAV5A0A0B4J249 113 aa13.77□□□□□ -0.21
CLPX-203ENST00000558958 TMEM213A2RRL7 107 aa13.77□□□□□ -0.21
CLPX-203ENST00000558958 ZNF98A6NK75 572 aa13.77□□□□□ -0.21
CLPX-203ENST00000558958 APOHP02749 345 aaPredicted RBP13.77□□□□□ -0.21
CLPX-203ENST00000558958 S100A7P31151 101 aa13.77□□□□□ -0.21
CLPX-203ENST00000558958 SCRT1Q9BWW7 348 aa13.77□□□□□ -0.21
CLPX-203ENST00000558958 PFDN2Q9UHV9 154 aa13.77□□□□□ -0.21
CLPX-203ENST00000558958 STAB1Q9NY15 2570 aa13.76□□□□□ -0.21
CLPX-203ENST00000558958 BUB3O43684 328 aa13.76□□□□□ -0.21
CLPX-203ENST00000558958 H2AFB1P0C5Y9 115 aa13.76□□□□□ -0.21
CLPX-203ENST00000558958 C8orf88P0DMB2 117 aa13.76□□□□□ -0.21
CLPX-203ENST00000558958 BLOC1S1P78537 153 aa13.76□□□□□ -0.21
CLPX-203ENST00000558958 LEMD1Q68G75 181 aa13.76□□□□□ -0.21
CLPX-203ENST00000558958 SHISA2Q6UWI4 295 aa13.76□□□□□ -0.21
CLPX-203ENST00000558958 OR4F17Q8NGA8 305 aa13.76□□□□□ -0.21
CLPX-203ENST00000558958 MBD3L1Q8WWY6 194 aa13.76□□□□□ -0.21
CLPX-203ENST00000558958 FAM167A-AS1Q96KT0 104 aa13.76□□□□□ -0.21
CLPX-203ENST00000558958 OR4F4Q96R69 305 aa13.76□□□□□ -0.21
CLPX-203ENST00000558958 TECRQ9NZ01 308 aaKnown RBP13.76□□□□□ -0.21
CLPX-203ENST00000558958 IGHV3-49A0A0A0MS15 119 aa13.75□□□□□ -0.21
CLPX-203ENST00000558958 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
CLPX-203ENST00000558958 HMGB3O15347 200 aaKnown RBP13.75□□□□□ -0.21
CLPX-203ENST00000558958 STAG3L2P0CL84 134 aa13.75□□□□□ -0.21
CLPX-203ENST00000558958 STAG3L3P0CL85 134 aa13.75□□□□□ -0.21
CLPX-203ENST00000558958 LCN15Q6UWW0 184 aa13.75□□□□□ -0.21
CLPX-203ENST00000558958 OR9G4Q8NGQ1 327 aa13.75□□□□□ -0.21
CLPX-203ENST00000558958 SLC25A2Q9BXI2 301 aa13.75□□□□□ -0.21
CLPX-203ENST00000558958 PEMTQ9UBM1 199 aa13.75□□□□□ -0.21
CLPX-203ENST00000558958 SMPXQ9UHP9 88 aa13.75□□□□□ -0.21
CLPX-203ENST00000558958 WNK1Q9H4A3 2382 aa13.75□□□□□ -0.21
CLPX-203ENST00000558958 IGHV3OR16-13A0A075B7E8 117 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 IGHV3-74A0A0B4J1X5 117 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 MAP1LC3B2A6NCE7 125 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 C2orf70A6NJV1 201 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 NMBP08949 121 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 EDN2P20800 178 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 TAS2R45P59539 299 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 C1orf194Q5T5A4 169 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 SFT2D1Q8WV19 159 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 PCNPQ8WW12 178 aaKnown RBP13.74□□□□□ -0.21
CLPX-203ENST00000558958 NARS2Q96I59 477 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms