RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ODF3L2Q3SX64 289 aa6.7□□□□□ -1.34
SPG11-207ENST00000558138 FAM90A2PQ658T7 463 aa6.7□□□□□ -1.34
SPG11-207ENST00000558138 LEMD1Q68G75 181 aa6.7□□□□□ -1.34
SPG11-207ENST00000558138 ZNF546Q86UE3 836 aa6.7□□□□□ -1.34
SPG11-207ENST00000558138 GGACTQ9BVM4 153 aa6.7□□□□□ -1.34
SPG11-207ENST00000558138 SLC25A31Q9H0C2 315 aa6.7□□□□□ -1.34
SPG11-207ENST00000558138 MED28Q9H204 178 aa6.7□□□□□ -1.34
SPG11-207ENST00000558138 MAP6D1Q9H9H5 199 aa6.7□□□□□ -1.34
SPG11-207ENST00000558138 LYRM2Q9NU23 88 aaPredicted RBP6.7□□□□□ -1.34
SPG11-207ENST00000558138 UQCC1Q9NVA1 299 aa6.7□□□□□ -1.34
SPG11-207ENST00000558138 HIGD1AQ9Y241 93 aa6.7□□□□□ -1.34
SPG11-207ENST00000558138 PRKDCP78527 4128 aaKnown RBP6.69□□□□□ -1.34
SPG11-207ENST00000558138 IGKV1OR2-108A0A075B7D4 117 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 TRAV2A0A0B4J234 112 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 RBMY1BA6NDE4 496 aaKnown RBP6.69□□□□□ -1.34
SPG11-207ENST00000558138 RBMY1EA6NEQ0 496 aaKnown RBP6.69□□□□□ -1.34
SPG11-207ENST00000558138 PMS2P5A8MQ11 134 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 FNDC10F2Z333 226 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 BUB3O43684 328 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 COX7A2P2O60397 106 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 HYPMO75409 117 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 RBMY1DP0C7P1 496 aaKnown RBP6.69□□□□□ -1.34
SPG11-207ENST00000558138 S100A11P31949 105 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 GALR1P47211 349 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 ZNF124Q15973 351 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 PSMG4Q5JS54 123 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 STHQ8IWL8 128 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 TMEM252Q8N6L7 170 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 STPG3Q8N7X2 389 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 PPP1R1CQ8WVI7 109 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 GLMPQ8WWB7 406 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 LINC00052Q96N35 136 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 FAM110AQ9BQ89 295 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 ARL6Q9H0F7 186 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 RETNQ9HD89 108 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 NRN1Q9NPD7 142 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 TGP01266 2768 aa6.69□□□□□ -1.34
SPG11-207ENST00000558138 IGSF23A1L1A6 192 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 AGPAT2O15120 278 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 ATF4P18848 351 aaPredicted RBP6.68□□□□□ -1.34
SPG11-207ENST00000558138 FGF7P21781 194 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 ID1P41134 155 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 CAMLGP49069 296 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 ARL16Q0P5N6 197 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 CLINT1Q14677 625 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 C1orf194Q5T5A4 169 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 Q6ZRG5 221 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 FAM24BQ8N5W8 94 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 C16orf92Q96LL3 132 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 WWC2-AS2Q96NR7 200 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 OR5AC2Q9NZP5 309 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 U3KQE9 123 aa6.68□□□□□ -1.34
SPG11-207ENST00000558138 K7EQG2 157 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 H2BFSP57053 126 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 EWSR1Q01844 656 aaKnown RBP eCLIP6.67□□□□□ -1.34
SPG11-207ENST00000558138 ATP6V1FQ16864 119 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 TMEM182Q6ZP80 229 aaPredicted RBP6.67□□□□□ -1.34
SPG11-207ENST00000558138 ZNF709Q8N972 641 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 OR5C1Q8NGR4 320 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 THAP6Q8TBB0 222 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 LRRC20Q8TCA0 184 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 GPR82Q96P67 336 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 CITED4Q96RK1 184 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 MGST2Q99735 147 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 TM2D3Q9BRN9 247 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 SCRT1Q9BWW7 348 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 SLC25A39Q9BZJ4 359 aaPredicted RBP6.67□□□□□ -1.34
SPG11-207ENST00000558138 ARV1Q9H2C2 271 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 SLC45A2Q9UMX9 530 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 RNF24Q9Y225 148 aa6.67□□□□□ -1.34
SPG11-207ENST00000558138 ZNF98A6NK75 572 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 KNCNA6PVL3 124 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 H3BRN7 92 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 MPC2O95563 127 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 CA1P00915 261 aaPredicted RBP6.66□□□□□ -1.34
SPG11-207ENST00000558138 MEOX2P50222 304 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 NHLH2Q02577 135 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 IL15RAQ13261 267 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 DEFB135Q30KP9 77 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 PXDC1Q5TGL8 231 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 SAMD13Q5VXD3 122 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 C10orf113Q5VZT2 155 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 OR1L4Q8NGR5 311 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 UHRF2Q96PU4 802 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 RSG1Q9BU20 258 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 SMIM3Q9BZL3 60 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 SLC25A32Q9H2D1 315 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 MBD2Q9UBB5 411 aa6.66□□□□□ -1.34
SPG11-207ENST00000558138 C17orf112F2Z3M2 114 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 UBE2CO00762 179 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 MPDU1O75352 247 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 IFNA5P01569 189 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 RPL7P18124 248 aaKnown RBP6.65□□□□□ -1.34
SPG11-207ENST00000558138 RPL12P30050 165 aaKnown RBP6.65□□□□□ -1.34
SPG11-207ENST00000558138 B2MP61769 119 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 FCN2Q15485 313 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 MIC13Q5XKP0 118 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 EBLN2Q6P2I7 272 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 LINC00322Q6ZN03 302 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms