RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CFDP00746 253 aaPredicted RBP11.54□□□□□ -0.56
NEDD1-213ENST00000557644 HNRNPCP07910 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
NEDD1-213ENST00000557644 LGALSLQ3ZCW2 172 aaPredicted RBP11.54□□□□□ -0.56
NEDD1-213ENST00000557644 ZFP69Q49AA0 526 aa11.54□□□□□ -0.56
NEDD1-213ENST00000557644 PATE2Q6UY27 113 aa11.54□□□□□ -0.56
NEDD1-213ENST00000557644 HSD17B11Q8NBQ5 300 aa11.54□□□□□ -0.56
NEDD1-213ENST00000557644 SLC39A9Q9NUM3 307 aa11.54□□□□□ -0.56
NEDD1-213ENST00000557644 OR5G3P0C626 314 aa11.54□□□□□ -0.56
NEDD1-213ENST00000557644 INSL3P51460 131 aa11.54□□□□□ -0.56
NEDD1-213ENST00000557644 PLP1P60201 277 aa11.54□□□□□ -0.56
NEDD1-213ENST00000557644 GCSAMLQ5JQS6 135 aa11.54□□□□□ -0.56
NEDD1-213ENST00000557644 HYLS1Q96M11 299 aa11.54□□□□□ -0.56
NEDD1-213ENST00000557644 PARD6GQ9BYG4 376 aaPredicted RBP11.54□□□□□ -0.56
NEDD1-213ENST00000557644 CYTL1Q9NRR1 136 aa11.54□□□□□ -0.56
NEDD1-213ENST00000557644 U3KQE9 123 aa11.54□□□□□ -0.56
NEDD1-213ENST00000557644 WIPF1O43516 503 aa11.53□□□□□ -0.56
NEDD1-213ENST00000557644 HYPMO75409 117 aa11.53□□□□□ -0.56
NEDD1-213ENST00000557644 NKX2-5P52952 324 aaPredicted RBP11.53□□□□□ -0.56
NEDD1-213ENST00000557644 ZNF709Q8N972 641 aa11.53□□□□□ -0.56
NEDD1-213ENST00000557644 TMEM37Q8WXS4 190 aa11.53□□□□□ -0.56
NEDD1-213ENST00000557644 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
NEDD1-213ENST00000557644 A0A0D9SG52 128 aa11.53□□□□□ -0.56
NEDD1-213ENST00000557644 LEMD1Q68G75 181 aa11.53□□□□□ -0.56
NEDD1-213ENST00000557644 TMUB2Q71RG4 321 aa11.53□□□□□ -0.56
NEDD1-213ENST00000557644 TMEM61Q8N0U2 210 aa11.53□□□□□ -0.56
NEDD1-213ENST00000557644 ARV1Q9H2C2 271 aa11.53□□□□□ -0.56
NEDD1-213ENST00000557644 BUB3O43684 328 aa11.52□□□□□ -0.57
NEDD1-213ENST00000557644 Q6ZRG5 221 aa11.52□□□□□ -0.57
NEDD1-213ENST00000557644 PPP1R14BQ96C90 147 aa11.52□□□□□ -0.57
NEDD1-213ENST00000557644 ARPC5LQ9BPX5 153 aa11.52□□□□□ -0.57
NEDD1-213ENST00000557644 SH3BGRL3Q9H299 93 aa11.52□□□□□ -0.57
NEDD1-213ENST00000557644 TAAR5O14804 337 aa11.52□□□□□ -0.57
NEDD1-213ENST00000557644 PFDN1O60925 122 aa11.52□□□□□ -0.57
NEDD1-213ENST00000557644 ATP6V0CP27449 155 aa11.52□□□□□ -0.57
NEDD1-213ENST00000557644 KRTAP10-11P60412 298 aa11.52□□□□□ -0.57
NEDD1-213ENST00000557644 SCRT1Q9BWW7 348 aa11.52□□□□□ -0.57
NEDD1-213ENST00000557644 TECRQ9NZ01 308 aaKnown RBP11.52□□□□□ -0.57
NEDD1-213ENST00000557644 HIGD1AQ9Y241 93 aa11.52□□□□□ -0.57
NEDD1-213ENST00000557644 DNAH3Q8TD57 4116 aa11.51□□□□□ -0.57
NEDD1-213ENST00000557644 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
NEDD1-213ENST00000557644 C17orf112F2Z3M2 114 aa11.51□□□□□ -0.57
NEDD1-213ENST00000557644 COX7A2P2O60397 106 aa11.51□□□□□ -0.57
NEDD1-213ENST00000557644 MORN5Q5VZ52 161 aa11.51□□□□□ -0.57
NEDD1-213ENST00000557644 NARS2Q96I59 477 aaKnown RBP11.51□□□□□ -0.57
NEDD1-213ENST00000557644 SLC25A39Q9BZJ4 359 aaPredicted RBP11.51□□□□□ -0.57
NEDD1-213ENST00000557644 GPR61Q9BZJ8 451 aa11.51□□□□□ -0.57
NEDD1-213ENST00000557644 SLC25A22Q9H936 323 aa11.51□□□□□ -0.57
NEDD1-213ENST00000557644 BORCS7-ASMTA0A0B4J1R7 106 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 A0A1W2PS18 150 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 BCL2L11O43521 198 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 DNAJC4Q9NNZ3 241 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 KANTRA0A1W2PQU2 76 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 ZNF98A6NK75 572 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 JTBO76095 146 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 FFAR4Q5NUL3 377 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 LAMTOR1Q6IAA8 161 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 C16orf54Q6UWD8 224 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 TCF24Q7RTU0 167 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 LINC00305Q7Z4B0 112 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 C9orf62Q8N4C0 152 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 GLMPQ8WWB7 406 aa11.5□□□□□ -0.57
NEDD1-213ENST00000557644 H3BRN7 92 aa11.49□□□□□ -0.57
NEDD1-213ENST00000557644 EGFEM1PQ0D2K5 195 aa11.49□□□□□ -0.57
NEDD1-213ENST00000557644 PXDC1Q5TGL8 231 aa11.49□□□□□ -0.57
NEDD1-213ENST00000557644 C10orf113Q5VZT2 155 aa11.49□□□□□ -0.57
NEDD1-213ENST00000557644 FAM90A2PQ658T7 463 aa11.49□□□□□ -0.57
NEDD1-213ENST00000557644 SHANK2-AS3Q9BTD1 123 aa11.49□□□□□ -0.57
NEDD1-213ENST00000557644 ZNF471Q9BX82 626 aaPredicted RBP11.49□□□□□ -0.57
NEDD1-213ENST00000557644 SORL1Q92673 2214 aa11.49□□□□□ -0.57
NEDD1-213ENST00000557644 ELOA3CA0A087WX78 387 aaPredicted RBP11.49□□□□□ -0.57
NEDD1-213ENST00000557644 RPL11P62913 178 aaKnown RBP11.49□□□□□ -0.57
NEDD1-213ENST00000557644 BEAN1Q3B7T3 259 aa11.49□□□□□ -0.57
NEDD1-213ENST00000557644 RBPMS2Q6ZRY4 209 aaKnown RBP11.49□□□□□ -0.57
NEDD1-213ENST00000557644 GBGT1Q8N5D6 347 aa11.49□□□□□ -0.57
NEDD1-213ENST00000557644 TMEM231Q9H6L2 316 aa11.49□□□□□ -0.57
NEDD1-213ENST00000557644 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
NEDD1-213ENST00000557644 ZNF785A8K8V0 405 aa11.48□□□□□ -0.57
NEDD1-213ENST00000557644 PRB2P02812 416 aaPredicted RBP11.48□□□□□ -0.57
NEDD1-213ENST00000557644 BMI1P35226 326 aa11.48□□□□□ -0.57
NEDD1-213ENST00000557644 GRAMD2BQ96HH9 432 aa11.48□□□□□ -0.57
NEDD1-213ENST00000557644 SLC25A32Q9H2D1 315 aa11.48□□□□□ -0.57
NEDD1-213ENST00000557644 TIMM9Q9Y5J7 89 aa11.48□□□□□ -0.57
NEDD1-213ENST00000557644 TRAV5A0A0B4J249 113 aa11.48□□□□□ -0.57
NEDD1-213ENST00000557644 GUCA2BQ16661 112 aa11.48□□□□□ -0.57
NEDD1-213ENST00000557644 LCN12Q6JVE5 192 aa11.48□□□□□ -0.57
NEDD1-213ENST00000557644 OR8I2Q8N0Y5 310 aa11.48□□□□□ -0.57
NEDD1-213ENST00000557644 OR1L4Q8NGR5 311 aa11.48□□□□□ -0.57
NEDD1-213ENST00000557644 SEPSECSQ9HD40 501 aaKnown RBP11.48□□□□□ -0.57
NEDD1-213ENST00000557644 PFDN2Q9UHV9 154 aa11.48□□□□□ -0.57
NEDD1-213ENST00000557644 TFPI2P48307 235 aa11.47□□□□□ -0.57
NEDD1-213ENST00000557644 SPATA31B1PQ5VZV4 182 aa11.47□□□□□ -0.57
NEDD1-213ENST00000557644 PFDN5Q99471 154 aa11.47□□□□□ -0.57
NEDD1-213ENST00000557644 TSPAN4O14817 238 aa11.47□□□□□ -0.57
NEDD1-213ENST00000557644 EIF3GO75821 320 aaKnown RBP eCLIP11.47□□□□□ -0.57
NEDD1-213ENST00000557644 C1orf194Q5T5A4 169 aa11.47□□□□□ -0.57
NEDD1-213ENST00000557644 KPRPQ5T749 579 aaPredicted RBP11.47□□□□□ -0.57
NEDD1-213ENST00000557644 FAM78BQ5VT40 261 aa11.47□□□□□ -0.57
NEDD1-213ENST00000557644 SIGLEC15Q6ZMC9 328 aa11.47□□□□□ -0.57
NEDD1-213ENST00000557644 OR2K2Q8NGT1 345 aa11.47□□□□□ -0.57
NEDD1-213ENST00000557644 GATAD1Q8WUU5 269 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms