RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CSTL1Q9H114 145 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 OR51E2Q9H255 320 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 KLK9Q9UKQ9 250 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 UFC1Q9Y3C8 167 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 FAT2Q9NYQ8 4349 aa4.27□□□□□ -1.73
VPS33B-207ENST00000557470 DNAH2Q9P225 4427 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 IGHV3OR16-8A0A075B7F1 116 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 IGKV1D-8A0A087WSZ0 117 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 RPS10-NUDT3A0A1W2PQS6 291 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 OR4C46A6NHA9 309 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 SLC17A2O00624 439 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 RTL8CO15255 209 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 UCHL1P09936 223 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 DEFA4P12838 97 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 HIST1H1BP16401 226 aaKnown RBP4.26□□□□□ -1.73
VPS33B-207ENST00000557470 MAS1LP35410 378 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 CLDN12P56749 244 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 RPL30P62888 115 aaKnown RBP4.26□□□□□ -1.73
VPS33B-207ENST00000557470 ARFRP1Q13795 201 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 MEF2DQ14814 521 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 VAMP3Q15836 100 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 LAMTOR1Q6IAA8 161 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 PLET1Q6UQ28 207 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 UQCC3Q6UW78 93 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 AHSA2Q719I0 299 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 PUSL1Q8N0Z8 303 aaKnown RBP4.26□□□□□ -1.73
VPS33B-207ENST00000557470 C9orf62Q8N4C0 152 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 GBGT1Q8N5D6 347 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 MS4A15Q8N5U1 240 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 VSTM2AQ8TAG5 236 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 TMEM167AQ8TBQ9 72 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 DYNC2LI1Q8TCX1 351 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 OR2A7Q96R45 310 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 GGACTQ9BVM4 153 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 NKX6-2Q9C056 277 aaPredicted RBP4.26□□□□□ -1.73
VPS33B-207ENST00000557470 DAZ1Q9NQZ3 744 aaKnown RBP4.26□□□□□ -1.73
VPS33B-207ENST00000557470 DKK2Q9UBU2 259 aa4.26□□□□□ -1.73
VPS33B-207ENST00000557470 LSM2Q9Y333 95 aaKnown RBP4.26□□□□□ -1.73
VPS33B-207ENST00000557470 DNAH17Q9UFH2 4485 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 TMEM272A0A1B0GTI8 110 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 OR2T8A6NH00 312 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 C1orf196B1AJZ1 125 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 C11orf94C9JXX5 98 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 DLEU1O43261 78 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 TGOLN2O43493 480 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 ZNF207O43670 478 aaKnown RBP4.25□□□□□ -1.73
VPS33B-207ENST00000557470 CA1P00915 261 aaPredicted RBP4.25□□□□□ -1.73
VPS33B-207ENST00000557470 IFNA17P01571 189 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 IGLV2-14P01704 120 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 APOHP02749 345 aaPredicted RBP4.25□□□□□ -1.73
VPS33B-207ENST00000557470 PPBPP02775 128 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 SERPINE2P07093 398 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 CTSDP07339 412 aaPredicted RBP4.25□□□□□ -1.73
VPS33B-207ENST00000557470 FGF2P09038 288 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 CTXN2P0C2S0 81 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 GNB3P16520 340 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 MYL9P24844 172 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 DDTP30046 118 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 S100A11P31949 105 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 CDC34P49427 236 aaPredicted RBP4.25□□□□□ -1.73
VPS33B-207ENST00000557470 BRWD1-AS2P59051 145 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 SEC61BP60468 96 aaKnown RBP4.25□□□□□ -1.73
VPS33B-207ENST00000557470 RPL8P62917 257 aaKnown RBP4.25□□□□□ -1.73
VPS33B-207ENST00000557470 NEDD8Q15843 81 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 MRPL23Q16540 153 aaKnown RBP4.25□□□□□ -1.73
VPS33B-207ENST00000557470 ZNF575Q86XF7 245 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 SVBPQ8N300 66 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 ZNF645Q8N7E2 425 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 OR4S2Q8NH73 311 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 OR4A5Q8NH83 315 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 ZNF431Q8TF32 576 aaPredicted RBP4.25□□□□□ -1.73
VPS33B-207ENST00000557470 FAM3DQ96BQ1 224 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 RAB3CQ96E17 227 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 FAM210BQ96KR6 192 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 TPRKBQ9Y3C4 175 aa4.25□□□□□ -1.73
VPS33B-207ENST00000557470 AK6Q9Y3D8 172 aaKnown RBP4.25□□□□□ -1.73
VPS33B-207ENST00000557470 IGHV4-4A0A075B6R2 117 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 IGKV1D-13A0A0B4J2D9 117 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 IGLC7A0M8Q6 106 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 TMEM238C9JI98 176 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 NDUFA4O00483 81 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 MFNGO00587 321 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 IGKV1-13P0DP09 117 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 ANXA3P12429 323 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 HIST1H1DP16402 221 aaKnown RBP4.24□□□□□ -1.73
VPS33B-207ENST00000557470 HLA-GP17693 338 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 NFYAP23511 347 aaPredicted RBP4.24□□□□□ -1.73
VPS33B-207ENST00000557470 S100A2P29034 98 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 TFPI2P48307 235 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 OR2B8PP59922 312 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 EIF4EBP1Q13541 118 aaPredicted RBP4.24□□□□□ -1.73
VPS33B-207ENST00000557470 PSG3Q16557 428 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 TIMM50Q3ZCQ8 353 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 DHRS11Q6UWP2 260 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 Q6ZTC4 211 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 ARRDC1Q8N5I2 433 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 LRTM2Q8N967 370 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 Q8NAQ8 132 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 OR10R2Q8NGX6 335 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 AP3S1Q92572 193 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms