RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 THAP8Q8NA92 274 aa8.78□□□□□ -1
SYNE2-226ENST00000557084 ZBTB8BQ8NAP8 495 aaPredicted RBP8.78□□□□□ -1
SYNE2-226ENST00000557084 OR4D5Q8NGN0 318 aa8.78□□□□□ -1
SYNE2-226ENST00000557084 DCANP1Q8TF63 244 aa8.78□□□□□ -1
SYNE2-226ENST00000557084 SMIM8Q96KF7 97 aa8.78□□□□□ -1
SYNE2-226ENST00000557084 RAB40CQ96S21 281 aa8.78□□□□□ -1
SYNE2-226ENST00000557084 RARRES2Q99969 163 aa8.78□□□□□ -1
SYNE2-226ENST00000557084 L7N2F9 121 aa8.77□□□□□ -1.01
SYNE2-226ENST00000557084 ORM2P19652 201 aa8.77□□□□□ -1.01
SYNE2-226ENST00000557084 VAMP2P63027 116 aa8.77□□□□□ -1.01
SYNE2-226ENST00000557084 PMS2P11Q13670 270 aa8.77□□□□□ -1.01
SYNE2-226ENST00000557084 OR10P1Q8NGE3 313 aa8.77□□□□□ -1.01
SYNE2-226ENST00000557084 OR11H2Q8NH07 326 aa8.77□□□□□ -1.01
SYNE2-226ENST00000557084 ZNF431Q8TF32 576 aaPredicted RBP8.77□□□□□ -1.01
SYNE2-226ENST00000557084 TMEM147Q9BVK8 224 aa8.77□□□□□ -1.01
SYNE2-226ENST00000557084 WDR12Q9GZL7 423 aaKnown RBP8.77□□□□□ -1.01
SYNE2-226ENST00000557084 MGAT4CQ9UBM8 478 aa8.77□□□□□ -1.01
SYNE2-226ENST00000557084 IGKV1OR2-108A0A075B7D4 117 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 CCSO14618 274 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 JTBO76095 146 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 IL5P05113 134 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 METTL15P1P0C7V9 234 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 SPP1P10451 314 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 BCAP31P51572 246 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 TAS2R30P59541 319 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 NUTF2P61970 127 aaKnown RBP8.76□□□□□ -1.01
SYNE2-226ENST00000557084 RRAS2P62070 204 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-226ENST00000557084 TMEM41BQ5BJD5 291 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 MORN3Q6PF18 240 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-226ENST00000557084 C12orf45Q8N5I9 185 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-226ENST00000557084 OR1B1Q8NGR6 318 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 ENKURQ8TC29 256 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 LINC00052Q96N35 136 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 SEC22CQ9BRL7 303 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 SLC25A22Q9H936 323 aa8.76□□□□□ -1.01
SYNE2-226ENST00000557084 SEPSECSQ9HD40 501 aaKnown RBP8.76□□□□□ -1.01
SYNE2-226ENST00000557084 PRSS46E5RG02 174 aa8.75□□□□□ -1.01
SYNE2-226ENST00000557084 TSC22D2O75157 780 aa8.75□□□□□ -1.01
SYNE2-226ENST00000557084 MBPP02686 304 aaPredicted RBP8.75□□□□□ -1.01
SYNE2-226ENST00000557084 GALR1P47211 349 aa8.75□□□□□ -1.01
SYNE2-226ENST00000557084 ASAH1Q13510 395 aa8.75□□□□□ -1.01
SYNE2-226ENST00000557084 TMEM144Q7Z5S9 345 aa8.75□□□□□ -1.01
SYNE2-226ENST00000557084 S100A7AQ86SG5 101 aa8.75□□□□□ -1.01
SYNE2-226ENST00000557084 TRPT1Q86TN4 253 aaKnown RBP8.75□□□□□ -1.01
SYNE2-226ENST00000557084 LSM5Q9Y4Y9 91 aaKnown RBP8.75□□□□□ -1.01
SYNE2-226ENST00000557084 PVALBP20472 110 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-226ENST00000557084 GATA2P23769 480 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-226ENST00000557084 CAV2P51636 162 aa8.74□□□□□ -1.01
SYNE2-226ENST00000557084 RAP2BP61225 183 aa8.74□□□□□ -1.01
SYNE2-226ENST00000557084 SELENOTP62341 195 aa8.74□□□□□ -1.01
SYNE2-226ENST00000557084 DLK1P80370 383 aa8.74□□□□□ -1.01
SYNE2-226ENST00000557084 SAMD13Q5VXD3 122 aa8.74□□□□□ -1.01
SYNE2-226ENST00000557084 TMEM14EPQ6UXP3 125 aa8.74□□□□□ -1.01
SYNE2-226ENST00000557084 CYP2G1PQ6ZSU1 146 aa8.74□□□□□ -1.01
SYNE2-226ENST00000557084 GPN1Q9HCN4 374 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-226ENST00000557084 NPVFQ9HCQ7 196 aa8.74□□□□□ -1.01
SYNE2-226ENST00000557084 SLC45A2Q9UMX9 530 aa8.74□□□□□ -1.01
SYNE2-226ENST00000557084 RCL1Q9Y2P8 373 aaKnown RBP8.74□□□□□ -1.01
SYNE2-226ENST00000557084 RYR2Q92736 4967 aa8.74□□□□□ -1.01
SYNE2-226ENST00000557084 LCE6AA0A183 80 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 C7orf66A4D0T2 115 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 ZNF98A6NK75 572 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 HYPMO75409 117 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 UPK1BO75841 260 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 OR5G3P0C626 314 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 PSMB3P49720 205 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 MEOX2P50222 304 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 PAX9P55771 341 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 S100A10P60903 97 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 TEPPQ6URK8 271 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 GSG1LQ6UXU4 331 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 C16orf92Q96LL3 132 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 C2orf50Q96LR7 162 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 GPR82Q96P67 336 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 RSG1Q9BU20 258 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 C1QTNF4Q9BXJ3 329 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 DOK5Q9P104 306 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 TBC1D24Q9ULP9 559 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 HIGD1AQ9Y241 93 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 AGRNO00468 2067 aa8.73□□□□□ -1.01
SYNE2-226ENST00000557084 DYNC2H1Q8NCM8 4307 aaKnown RBP8.72□□□□□ -1.01
SYNE2-226ENST00000557084 NUPR2A6NF83 97 aa8.72□□□□□ -1.01
SYNE2-226ENST00000557084 FNDC10F2Z333 226 aa8.72□□□□□ -1.01
SYNE2-226ENST00000557084 ISLRO14498 428 aa8.72□□□□□ -1.01
SYNE2-226ENST00000557084 GOSR2O14653 212 aa8.72□□□□□ -1.01
SYNE2-226ENST00000557084 CCNKO75909 580 aa8.72□□□□□ -1.01
SYNE2-226ENST00000557084 LINC00869P0C866 280 aa8.72□□□□□ -1.01
SYNE2-226ENST00000557084 ATF4P18848 351 aaPredicted RBP8.72□□□□□ -1.01
SYNE2-226ENST00000557084 EBLN2Q6P2I7 272 aa8.72□□□□□ -1.01
SYNE2-226ENST00000557084 GGACTQ9BVM4 153 aa8.72□□□□□ -1.01
SYNE2-226ENST00000557084 MFFQ9GZY8 342 aa8.72□□□□□ -1.01
SYNE2-226ENST00000557084 CLEC5AQ9NY25 188 aa8.72□□□□□ -1.01
SYNE2-226ENST00000557084 KLK5Q9Y337 293 aaPredicted RBP8.72□□□□□ -1.01
SYNE2-226ENST00000557084 H3BMM0 161 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 K7EPK0 472 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 DEFB4AO15263 64 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 DEDDO75618 318 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 IGKV3-20P01619 116 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 HLA-DRB4P13762 266 aa8.71□□□□□ -1.02
SYNE2-226ENST00000557084 EWSR1Q01844 656 aaKnown RBP eCLIP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms