RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 Q8N9W7 124 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 TMEM116Q8NCL8 245 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 C10orf105Q8TEF2 133 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 NOL4LQ96MY1 436 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-225ENST00000557060 TUBA4BQ9H853 241 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 ZNF469Q96JG9 3925 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-225ENST00000557060 H3BUX3 64 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 ISLRO14498 428 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 FSTL3O95633 263 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 AVPP01185 164 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 NBEAP1P0C6P0 100 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 TRGC1P0CF51 173 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 RPL15P61313 204 aaKnown RBP4.67□□□□□ -1.66
SYNE2-225ENST00000557060 SELENOTP62341 195 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 ZNF600Q6ZNG1 722 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 MALSU1Q96EH3 234 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIGD1AQ9Y241 93 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 UNC79Q9P2D8 2635 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 IGKV3-7A0A075B6H7 116 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 A0A1B0GUS0 222 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 PSMB11A5LHX3 300 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 CORTO00230 105 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIST1H2BKO60814 126 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 IGHV3-11P01762 117 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 AMY1AP04745 511 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIST1H2BJP06899 126 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIST1H2BOP23527 126 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIST1H2BBP33778 126 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 MAS1LP35410 378 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 ATP5IP56385 69 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIST1H2BDP58876 126 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIST1H2BCP62807 126 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIST2H2BEQ16778 126 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-225ENST00000557060 Q71RC1 249 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-225ENST00000557060 OR10G8Q8NGN5 311 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIST1H2BHQ93079 126 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 FANCD2OSQ96PS1 177 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 IMMP2LQ96T52 175 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIST1H2BNQ99877 126 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 HIST1H2BMQ99879 126 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 SLC25A39Q9BZJ4 359 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-225ENST00000557060 C21orf62Q9NYP8 219 aa4.67□□□□□ -1.66
SYNE2-225ENST00000557060 FNDC10F2Z333 226 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 M0R3E3 92 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 CLEC3BP05452 202 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 MSMBP08118 114 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 UBE2G1P62253 170 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 BLCAPP62952 87 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 RHOGP84095 191 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 USF2Q15853 346 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-225ENST00000557060 MINOS1Q5TGZ0 78 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 CLEC19AQ6UXS0 136 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 OR8I2Q8N0Y5 310 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 FXYD5Q96DB9 178 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 CHRDL1Q9BU40 450 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 MINOS1-NBL1R4GNA1 71 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 ELOA3CA0A087WX78 387 aaPredicted RBP4.66□□□□□ -1.66
SYNE2-225ENST00000557060 NDUFA3O95167 84 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 CBLN1P23435 193 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 TMEM95Q3KNT9 176 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 MRPL54Q6P161 138 aaKnown RBP4.66□□□□□ -1.66
SYNE2-225ENST00000557060 TEX38Q6PEX7 206 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 Q6ZS46 218 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 C1orf122Q6ZSJ8 110 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 ZNF329Q86UD4 541 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 BAGE2Q86Y30 109 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 THAP8Q8NA92 274 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 NPBQ8NG41 125 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 RNF125Q96EQ8 232 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 YPEL4Q96NS1 127 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 TRGV9Q99603 122 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 C12orf57Q99622 126 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 GPR61Q9BZJ8 451 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 C1RLQ9NZP8 487 aa4.66□□□□□ -1.66
SYNE2-225ENST00000557060 NIPBLQ6KC79 2804 aaeCLIP4.66□□□□□ -1.66
SYNE2-225ENST00000557060 IGHV1-69DA0A0B4J2H0 117 aa4.65□□□□□ -1.66
SYNE2-225ENST00000557060 CXorf65A6NEN9 183 aa4.65□□□□□ -1.66
SYNE2-225ENST00000557060 ZNF705GA8MUZ8 300 aaPredicted RBP4.65□□□□□ -1.66
SYNE2-225ENST00000557060 IGHV1-69P01742 117 aa4.65□□□□□ -1.66
SYNE2-225ENST00000557060 CRYGCP07315 174 aa4.65□□□□□ -1.66
SYNE2-225ENST00000557060 PFN1P07737 140 aaKnown RBP4.65□□□□□ -1.66
SYNE2-225ENST00000557060 KIAA1644Q3SXP7 199 aa4.65□□□□□ -1.66
SYNE2-225ENST00000557060 KCNIP4Q6PIL6 250 aa4.65□□□□□ -1.66
SYNE2-225ENST00000557060 GOLT1AQ6ZVE7 132 aa4.65□□□□□ -1.66
SYNE2-225ENST00000557060 CMTM2Q8TAZ6 248 aa4.65□□□□□ -1.66
SYNE2-225ENST00000557060 AJUBAQ96IF1 538 aa4.65□□□□□ -1.66
SYNE2-225ENST00000557060 RNF5Q99942 180 aa4.65□□□□□ -1.66
SYNE2-225ENST00000557060 MRPL32Q9BYC8 188 aaKnown RBP4.65□□□□□ -1.66
SYNE2-225ENST00000557060 Q9H3A6 140 aa4.65□□□□□ -1.66
SYNE2-225ENST00000557060 GRIFINA4D1Z8 144 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 INS-IGF2F8WCM5 200 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 PEX7O00628 323 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 EGR2P11161 476 aaPredicted RBP4.65□□□□□ -1.67
SYNE2-225ENST00000557060 IER3P46695 156 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 CNN1P51911 297 aaKnown RBP4.65□□□□□ -1.67
SYNE2-225ENST00000557060 MFAP4P55083 255 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 HIST2H2BDQ6DRA6 164 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 PRNTQ86SH4 94 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 C19orf24Q9BVV8 132 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms