RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 CAV2P51636 162 aa16.89■□□□□ 0.29
TDP1-216ENST00000556867 TMEM182Q6ZP80 229 aaPredicted RBP16.89■□□□□ 0.29
TDP1-216ENST00000556867 NRN1Q9NPD7 142 aa16.89■□□□□ 0.29
TDP1-216ENST00000556867 UBE2CO00762 179 aa16.88■□□□□ 0.29
TDP1-216ENST00000556867 RPL35AP18077 110 aaKnown RBP16.88■□□□□ 0.29
TDP1-216ENST00000556867 GATA2P23769 480 aaPredicted RBP16.88■□□□□ 0.29
TDP1-216ENST00000556867 SELENOTP62341 195 aa16.88■□□□□ 0.29
TDP1-216ENST00000556867 LYRM2Q9NU23 88 aaPredicted RBP16.88■□□□□ 0.29
TDP1-216ENST00000556867 FBXL17Q9UF56 701 aa16.88■□□□□ 0.29
TDP1-216ENST00000556867 FAM24AA6NFZ4 105 aa16.87■□□□□ 0.29
TDP1-216ENST00000556867 SIX6O95475 246 aa16.87■□□□□ 0.29
TDP1-216ENST00000556867 ZNF688P0C7X2 276 aa16.87■□□□□ 0.29
TDP1-216ENST00000556867 TEPPQ6URK8 271 aa16.87■□□□□ 0.29
TDP1-216ENST00000556867 PPP1R14BQ96C90 147 aa16.87■□□□□ 0.29
TDP1-216ENST00000556867 NMES1Q9C002 83 aa16.87■□□□□ 0.29
TDP1-216ENST00000556867 EDA2RQ9HAV5 297 aa16.87■□□□□ 0.29
TDP1-216ENST00000556867 SEPSECSQ9HD40 501 aaKnown RBP16.87■□□□□ 0.29
TDP1-216ENST00000556867 SLC38A11Q08AI6 406 aa16.86■□□□□ 0.29
TDP1-216ENST00000556867 LEMD1Q68G75 181 aa16.86■□□□□ 0.29
TDP1-216ENST00000556867 Q6ZWC4 215 aa16.86■□□□□ 0.29
TDP1-216ENST00000556867 CST7O76096 145 aa16.85■□□□□ 0.29
TDP1-216ENST00000556867 PTTG1O95997 202 aa16.85■□□□□ 0.29
TDP1-216ENST00000556867 ORM2P19652 201 aa16.85■□□□□ 0.29
TDP1-216ENST00000556867 PLP1P60201 277 aa16.85■□□□□ 0.29
TDP1-216ENST00000556867 CYCSP99999 105 aaKnown RBP16.85■□□□□ 0.29
TDP1-216ENST00000556867 OR1B1Q8NGR6 318 aa16.85■□□□□ 0.29
TDP1-216ENST00000556867 TMEM147Q9BVK8 224 aa16.85■□□□□ 0.29
TDP1-216ENST00000556867 TP53TG1Q9Y2A0 90 aa16.85■□□□□ 0.29
TDP1-216ENST00000556867 AGRNO00468 2067 aa16.84■□□□□ 0.29
TDP1-216ENST00000556867 IGSF23A1L1A6 192 aa16.84■□□□□ 0.29
TDP1-216ENST00000556867 LINC00869P0C866 280 aa16.84■□□□□ 0.29
TDP1-216ENST00000556867 S100A7P31151 101 aa16.84■□□□□ 0.29
TDP1-216ENST00000556867 SULT1A1P50225 295 aa16.84■□□□□ 0.29
TDP1-216ENST00000556867 OR8I2Q8N0Y5 310 aa16.84■□□□□ 0.29
TDP1-216ENST00000556867 TMEM252Q8N6L7 170 aa16.84■□□□□ 0.29
TDP1-216ENST00000556867 OVOL2Q9BRP0 275 aa16.84■□□□□ 0.29
TDP1-216ENST00000556867 ZNF98A6NK75 572 aa16.83■□□□□ 0.28
TDP1-216ENST00000556867 SSNA1O43805 119 aa16.83■□□□□ 0.28
TDP1-216ENST00000556867 H2BFSP57053 126 aa16.83■□□□□ 0.28
TDP1-216ENST00000556867 SNRPD3P62318 126 aaKnown RBP16.83■□□□□ 0.28
TDP1-216ENST00000556867 ZNF546Q86UE3 836 aa16.83■□□□□ 0.28
TDP1-216ENST00000556867 STX12Q86Y82 276 aa16.83■□□□□ 0.28
TDP1-216ENST00000556867 TMEM217Q8N7C4 229 aa16.83■□□□□ 0.28
TDP1-216ENST00000556867 VWC2Q2TAL6 325 aa16.82■□□□□ 0.28
TDP1-216ENST00000556867 DEFB135Q30KP9 77 aa16.82■□□□□ 0.28
TDP1-216ENST00000556867 PSMG4Q5JS54 123 aa16.82■□□□□ 0.28
TDP1-216ENST00000556867 MUC7Q8TAX7 377 aa16.82■□□□□ 0.28
TDP1-216ENST00000556867 CSTL1Q9H114 145 aa16.82■□□□□ 0.28
TDP1-216ENST00000556867 DOK5Q9P104 306 aa16.82■□□□□ 0.28
TDP1-216ENST00000556867 C3orf84H3BNL1 204 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 H3BRN7 92 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 AGPAT2O15120 278 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 HYPMO75409 117 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 RLN2P04090 185 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 RAP2BP61225 183 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 HBG1P69891 147 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 HBG2P69892 147 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 STHQ8IWL8 128 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 MGST2Q99735 147 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 SLC25A32Q9H2D1 315 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 UQCC1Q9NVA1 299 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 HIGD1AQ9Y241 93 aa16.81■□□□□ 0.28
TDP1-216ENST00000556867 E5RGE8 158 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 SOCS3O14543 225 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 SPRY2O43597 315 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 S100A11P31949 105 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 GALR1P47211 349 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 PXDC1Q5TGL8 231 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 TRPT1Q86TN4 253 aaKnown RBP16.8■□□□□ 0.28
TDP1-216ENST00000556867 RNF183Q96D59 192 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 GPR82Q96P67 336 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 SHANK2-AS3Q9BTD1 123 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 SCRT1Q9BWW7 348 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 SLC25A39Q9BZJ4 359 aaPredicted RBP16.8■□□□□ 0.28
TDP1-216ENST00000556867 SLC25A22Q9H936 323 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 WDR83OSQ9Y284 106 aa16.8■□□□□ 0.28
TDP1-216ENST00000556867 KNCNA6PVL3 124 aa16.79■□□□□ 0.28
TDP1-216ENST00000556867 LRRC37A5PQ49AS3 106 aa16.79■□□□□ 0.28
TDP1-216ENST00000556867 SAMD13Q5VXD3 122 aa16.79■□□□□ 0.28
TDP1-216ENST00000556867 OR5AC2Q9NZP5 309 aa16.79■□□□□ 0.28
TDP1-216ENST00000556867 H0YIZ8 118 aa16.78■□□□□ 0.28
TDP1-216ENST00000556867 OR5G3P0C626 314 aa16.78■□□□□ 0.28
TDP1-216ENST00000556867 PSMB3P49720 205 aa16.78■□□□□ 0.28
TDP1-216ENST00000556867 MEOX2P50222 304 aa16.78■□□□□ 0.28
TDP1-216ENST00000556867 ACTL10Q5JWF8 245 aa16.78■□□□□ 0.28
TDP1-216ENST00000556867 S100A7AQ86SG5 101 aa16.78■□□□□ 0.28
TDP1-216ENST00000556867 PPP1R1CQ8WVI7 109 aa16.78■□□□□ 0.28
TDP1-216ENST00000556867 ARL6Q9H0F7 186 aa16.78■□□□□ 0.28
TDP1-216ENST00000556867 ALG5Q9Y673 324 aa16.78■□□□□ 0.28
TDP1-216ENST00000556867 ID1P41134 155 aa16.77■□□□□ 0.28
TDP1-216ENST00000556867 CAMLGP49069 296 aa16.77■□□□□ 0.28
TDP1-216ENST00000556867 RAB31Q13636 194 aa16.77■□□□□ 0.28
TDP1-216ENST00000556867 ATP6V1FQ16864 119 aa16.77■□□□□ 0.28
TDP1-216ENST00000556867 PATE2Q6UY27 113 aa16.77■□□□□ 0.28
TDP1-216ENST00000556867 UHRF2Q96PU4 802 aa16.77■□□□□ 0.28
TDP1-216ENST00000556867 SLC25A31Q9H0C2 315 aa16.77■□□□□ 0.28
TDP1-216ENST00000556867 UBE2L5PA0A1B0GUS4 154 aa16.76■□□□□ 0.27
TDP1-216ENST00000556867 ISLRO14498 428 aa16.76■□□□□ 0.27
TDP1-216ENST00000556867 CA1P00915 261 aaPredicted RBP16.76■□□□□ 0.27
TDP1-216ENST00000556867 EWSR1Q01844 656 aaKnown RBP eCLIP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms