RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 GTSCR1Q86UQ5 136 aa13.21□□□□□ -0.29
PSEN1-218ENST00000556864 SCGB1C1Q8TD33 95 aa13.21□□□□□ -0.29
PSEN1-218ENST00000556864 RNF2Q99496 336 aa13.21□□□□□ -0.29
PSEN1-218ENST00000556864 NPCDR1Q9BY65 106 aa13.21□□□□□ -0.29
PSEN1-218ENST00000556864 PARD6GQ9BYG4 376 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-218ENST00000556864 AURKAIP1Q9NWT8 199 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-218ENST00000556864 HIGD1AQ9Y241 93 aa13.21□□□□□ -0.29
PSEN1-218ENST00000556864 U3KQE9 123 aa13.21□□□□□ -0.29
PSEN1-218ENST00000556864 OR4C46A6NHA9 309 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 ARPC5O15511 151 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 COX7A2P2O60397 106 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 APOHP02749 345 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-218ENST00000556864 OR5G3P0C626 314 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 RPL29P47914 159 aaKnown RBP13.2□□□□□ -0.3
PSEN1-218ENST00000556864 B2MP61769 119 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 C1orf194Q5T5A4 169 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 TMEM182Q6ZP80 229 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-218ENST00000556864 Q6ZRG5 221 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 AKAP14Q86UN6 197 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 STPG3Q8N7X2 389 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 PRR25Q96S07 402 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 ARL6Q9H0F7 186 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 DOK5Q9P104 306 aa13.2□□□□□ -0.3
PSEN1-218ENST00000556864 RNF222A6NCQ9 220 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 IZUMO1RA6ND01 250 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 SMLR1H3BR10 107 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 PAFAH1B2P68402 229 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 PRR20EP86478 221 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 PRR20CP86479 221 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 PRR20DP86480 221 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 PRR20BP86481 221 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 PRR20AP86496 221 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 C16orf54Q6UWD8 224 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 TCTE3Q8IZS6 198 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 OR1L4Q8NGR5 311 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 PFDN5Q99471 154 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 SELENOKQ9Y6D0 94 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 PXMP4Q9Y6I8 212 aa13.19□□□□□ -0.3
PSEN1-218ENST00000556864 ELOA3CA0A087WX78 387 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-218ENST00000556864 BUB3O43684 328 aa13.18□□□□□ -0.3
PSEN1-218ENST00000556864 RPL11P62913 178 aaKnown RBP13.18□□□□□ -0.3
PSEN1-218ENST00000556864 MIC13Q5XKP0 118 aa13.18□□□□□ -0.3
PSEN1-218ENST00000556864 GLMPQ8WWB7 406 aa13.18□□□□□ -0.3
PSEN1-218ENST00000556864 MFFQ9GZY8 342 aa13.18□□□□□ -0.3
PSEN1-218ENST00000556864 SLC39A9Q9NUM3 307 aa13.18□□□□□ -0.3
PSEN1-218ENST00000556864 FBN3Q75N90 2809 aa13.17□□□□□ -0.3
PSEN1-218ENST00000556864 BORCS7-ASMTA0A0B4J1R7 106 aa13.17□□□□□ -0.3
PSEN1-218ENST00000556864 TRAV2A0A0B4J234 112 aa13.17□□□□□ -0.3
PSEN1-218ENST00000556864 H3BRN7 92 aa13.17□□□□□ -0.3
PSEN1-218ENST00000556864 DEFA6Q01524 100 aa13.17□□□□□ -0.3
PSEN1-218ENST00000556864 ZNF345Q14585 488 aa13.17□□□□□ -0.3
PSEN1-218ENST00000556864 FAM90A2PQ658T7 463 aa13.17□□□□□ -0.3
PSEN1-218ENST00000556864 SIGLEC15Q6ZMC9 328 aa13.17□□□□□ -0.3
PSEN1-218ENST00000556864 ST6GAL2Q96JF0 529 aa13.17□□□□□ -0.3
PSEN1-218ENST00000556864 GPR82Q96P67 336 aa13.17□□□□□ -0.3
PSEN1-218ENST00000556864 SHANK2-AS3Q9BTD1 123 aa13.17□□□□□ -0.3
PSEN1-218ENST00000556864 NBEAL1Q6ZS30 2694 aa13.16□□□□□ -0.3
PSEN1-218ENST00000556864 ZNF785A8K8V0 405 aa13.16□□□□□ -0.3
PSEN1-218ENST00000556864 HMSDA8MTL9 139 aa13.16□□□□□ -0.3
PSEN1-218ENST00000556864 CD81P60033 236 aa13.16□□□□□ -0.3
PSEN1-218ENST00000556864 C10orf113Q5VZT2 155 aa13.16□□□□□ -0.3
PSEN1-218ENST00000556864 OR8I2Q8N0Y5 310 aa13.16□□□□□ -0.3
PSEN1-218ENST00000556864 NEURL2Q9BR09 285 aa13.16□□□□□ -0.3
PSEN1-218ENST00000556864 SLC25A39Q9BZJ4 359 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-218ENST00000556864 ARV1Q9H2C2 271 aa13.16□□□□□ -0.3
PSEN1-218ENST00000556864 IGKV3-7A0A075B6H7 116 aa13.15□□□□□ -0.3
PSEN1-218ENST00000556864 ZNF98A6NK75 572 aa13.15□□□□□ -0.3
PSEN1-218ENST00000556864 DNASE2O00115 360 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-218ENST00000556864 TAAR5O14804 337 aa13.15□□□□□ -0.3
PSEN1-218ENST00000556864 PRB2P02812 416 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-218ENST00000556864 GALR1P47211 349 aa13.15□□□□□ -0.3
PSEN1-218ENST00000556864 STXBP6Q8NFX7 210 aa13.15□□□□□ -0.3
PSEN1-218ENST00000556864 GATAD1Q8WUU5 269 aa13.15□□□□□ -0.3
PSEN1-218ENST00000556864 SCRT1Q9BWW7 348 aa13.15□□□□□ -0.3
PSEN1-218ENST00000556864 SLC25A22Q9H936 323 aa13.15□□□□□ -0.3
PSEN1-218ENST00000556864 WFDC1Q9HC57 220 aa13.15□□□□□ -0.3
PSEN1-218ENST00000556864 TIMM9Q9Y5J7 89 aa13.15□□□□□ -0.3
PSEN1-218ENST00000556864 RPL7P18124 248 aaKnown RBP13.14□□□□□ -0.31
PSEN1-218ENST00000556864 CMC4P56277 68 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-218ENST00000556864 SAMD13Q5VXD3 122 aa13.14□□□□□ -0.31
PSEN1-218ENST00000556864 UHRF2Q96PU4 802 aa13.14□□□□□ -0.31
PSEN1-218ENST00000556864 RSG1Q9BU20 258 aa13.14□□□□□ -0.31
PSEN1-218ENST00000556864 MS4A6AQ9H2W1 248 aa13.14□□□□□ -0.31
PSEN1-218ENST00000556864 NRN1Q9NPD7 142 aa13.14□□□□□ -0.31
PSEN1-218ENST00000556864 A0A0D9SG52 128 aa13.13□□□□□ -0.31
PSEN1-218ENST00000556864 K7EIL1 84 aa13.13□□□□□ -0.31
PSEN1-218ENST00000556864 C1QBP02746 253 aa13.13□□□□□ -0.31
PSEN1-218ENST00000556864 TFPI2P48307 235 aa13.13□□□□□ -0.31
PSEN1-218ENST00000556864 LINC00305Q7Z4B0 112 aa13.13□□□□□ -0.31
PSEN1-218ENST00000556864 GBGT1Q8N5D6 347 aa13.13□□□□□ -0.31
PSEN1-218ENST00000556864 KCNRGQ8N5I3 272 aa13.13□□□□□ -0.31
PSEN1-218ENST00000556864 MRAPQ8TCY5 172 aa13.13□□□□□ -0.31
PSEN1-218ENST00000556864 SLC25A32Q9H2D1 315 aa13.13□□□□□ -0.31
PSEN1-218ENST00000556864 DNAJC4Q9NNZ3 241 aa13.13□□□□□ -0.31
PSEN1-218ENST00000556864 MEGF8Q7Z7M0 2845 aa13.12□□□□□ -0.31
PSEN1-218ENST00000556864 A0A1B0GVG6 124 aa13.12□□□□□ -0.31
PSEN1-218ENST00000556864 JTBO76095 146 aa13.12□□□□□ -0.31
PSEN1-218ENST00000556864 ATF4P18848 351 aaPredicted RBP13.12□□□□□ -0.31
PSEN1-218ENST00000556864 MEOX2P50222 304 aa13.12□□□□□ -0.31
PSEN1-218ENST00000556864 FFAR4Q5NUL3 377 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms