RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 CCDC190Q86UF4 302 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 LRTM2Q8N967 370 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 PBDC1Q9BVG4 233 aa5.41□□□□□ -1.54
SCFD1-222ENST00000556768 MRPL36Q9P0J6 103 aaKnown RBP5.41□□□□□ -1.54
SCFD1-222ENST00000556768 KLK5Q9Y337 293 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-222ENST00000556768 NUPR2A6NF83 97 aa5.4□□□□□ -1.54
SCFD1-222ENST00000556768 WRBO00258 174 aa5.4□□□□□ -1.54
SCFD1-222ENST00000556768 TOMM40O96008 361 aa5.4□□□□□ -1.54
SCFD1-222ENST00000556768 CFDP00746 253 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-222ENST00000556768 PSG1P11464 419 aa5.4□□□□□ -1.54
SCFD1-222ENST00000556768 DHRS2Q13268 280 aa5.4□□□□□ -1.54
SCFD1-222ENST00000556768 ZNF79Q15937 498 aa5.4□□□□□ -1.54
SCFD1-222ENST00000556768 COQ8AQ8NI60 647 aa5.4□□□□□ -1.54
SCFD1-222ENST00000556768 PPP1R14BQ96C90 147 aa5.4□□□□□ -1.54
SCFD1-222ENST00000556768 CTDSP1Q9GZU7 261 aa5.4□□□□□ -1.54
SCFD1-222ENST00000556768 MFFQ9GZY8 342 aa5.4□□□□□ -1.54
SCFD1-222ENST00000556768 NDUFA13Q9P0J0 144 aa5.4□□□□□ -1.54
SCFD1-222ENST00000556768 LYSTQ99698 3801 aa5.4□□□□□ -1.55
SCFD1-222ENST00000556768 STARD9Q9P2P6 4700 aa5.4□□□□□ -1.55
SCFD1-222ENST00000556768 SFT2D2O95562 160 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 HOXB5P09067 269 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 ZNF688P0C7X2 276 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 PPP1R1AQ13522 171 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 ZNF124Q15973 351 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 CNPY1Q3B7I2 92 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 MORN3Q6PF18 240 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-222ENST00000556768 SIGLEC15Q6ZMC9 328 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 OR11H2Q8NH07 326 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 NRN1Q9NPD7 142 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 FBXL17Q9UF56 701 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 LINC00854A0A1B0GVQ3 168 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 K7EQG2 157 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 BUB3O43684 328 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 SYNGR2O43760 224 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 SPP1P10451 314 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 IAPPP10997 89 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 ID1P41134 155 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 GAMTQ14353 236 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 PSMG4Q5JS54 123 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 ACTL10Q5JWF8 245 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 GGNBP1Q5YKI7 109 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 OR8G2PQ6IF36 304 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 S100A7AQ86SG5 101 aa5.39□□□□□ -1.55
SCFD1-222ENST00000556768 C7orf50Q9BRJ6 194 aaKnown RBP5.39□□□□□ -1.55
SCFD1-222ENST00000556768 STRAPQ9Y3F4 350 aaKnown RBP5.39□□□□□ -1.55
SCFD1-222ENST00000556768 PITX3O75364 302 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 NDUFB6O95139 128 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 USF2Q15853 346 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-222ENST00000556768 SPANXN5Q5MJ07 72 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 C1orf194Q5T5A4 169 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 SAMD13Q5VXD3 122 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 OR8I2Q8N0Y5 310 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 C11orf45Q8TAV5 145 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 DCANP1Q8TF63 244 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 TMEM170AQ8WVE7 144 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 C1QTNF4Q9BXJ3 329 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 SRRQ9GZT4 340 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 MAGT1Q9H0U3 335 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 RBM38Q9H0Z9 239 aaKnown RBP5.38□□□□□ -1.55
SCFD1-222ENST00000556768 SACSQ9NZJ4 4579 aa5.38□□□□□ -1.55
SCFD1-222ENST00000556768 C9orf170A2RU37 121 aa5.37□□□□□ -1.55
SCFD1-222ENST00000556768 OR4E1P0C645 316 aa5.37□□□□□ -1.55
SCFD1-222ENST00000556768 NKX2-1P43699 371 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-222ENST00000556768 LYZP61626 148 aa5.37□□□□□ -1.55
SCFD1-222ENST00000556768 ZNF90Q03938 601 aa5.37□□□□□ -1.55
SCFD1-222ENST00000556768 AKR1C1Q04828 323 aa5.37□□□□□ -1.55
SCFD1-222ENST00000556768 CEMP1Q6PRD7 247 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-222ENST00000556768 FAM24BQ8N5W8 94 aa5.37□□□□□ -1.55
SCFD1-222ENST00000556768 GLMPQ8WWB7 406 aa5.37□□□□□ -1.55
SCFD1-222ENST00000556768 RAB40CQ96S21 281 aa5.37□□□□□ -1.55
SCFD1-222ENST00000556768 BPIFCQ8NFQ6 507 aa5.37□□□□□ -1.55
SCFD1-222ENST00000556768 TRGV9Q99603 122 aa5.37□□□□□ -1.55
SCFD1-222ENST00000556768 SMCO3A2RU48 225 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 KNCNA6PVL3 124 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 DIRC3C9JPN6 131 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 LY6G6CO95867 125 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 MIFP14174 115 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 GALR1P47211 349 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 MEOX2P50222 304 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 OR2F1Q13607 317 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 ZNF846Q147U1 533 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 TRPT1Q86TN4 253 aaKnown RBP5.36□□□□□ -1.55
SCFD1-222ENST00000556768 PHLDA1Q8WV24 401 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-222ENST00000556768 LINC00052Q96N35 136 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 TMEM147Q9BVK8 224 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 C11orf68Q9H3H3 251 aaKnown RBP5.36□□□□□ -1.55
SCFD1-222ENST00000556768 PSENENQ9NZ42 101 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 GSKIPQ9P0R6 139 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 RNF24Q9Y225 148 aa5.36□□□□□ -1.55
SCFD1-222ENST00000556768 DYNC2H1Q8NCM8 4307 aaKnown RBP5.35□□□□□ -1.55
SCFD1-222ENST00000556768 H3BP45 60 aa5.35□□□□□ -1.55
SCFD1-222ENST00000556768 ADAP1O75689 374 aa5.35□□□□□ -1.55
SCFD1-222ENST00000556768 IL5P05113 134 aa5.35□□□□□ -1.55
SCFD1-222ENST00000556768 IL7P13232 177 aa5.35□□□□□ -1.55
SCFD1-222ENST00000556768 ORM2P19652 201 aa5.35□□□□□ -1.55
SCFD1-222ENST00000556768 ANXA7P20073 488 aaKnown RBP5.35□□□□□ -1.55
SCFD1-222ENST00000556768 POLR2GP62487 172 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCFD1-222ENST00000556768 IAH1Q2TAA2 248 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-222ENST00000556768 SPATA31B1PQ5VZV4 182 aa5.35□□□□□ -1.55
SCFD1-222ENST00000556768 EBLN2Q6P2I7 272 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms