RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 RNASEH2CQ8TDP1 164 aaKnown RBP12.73□□□□□ -0.37
SDR39U1-219ENST00000556523 U3KQE9 123 aa12.73□□□□□ -0.37
SDR39U1-219ENST00000556523 VPS13DQ5THJ4 4388 aa12.73□□□□□ -0.37
SDR39U1-219ENST00000556523 FAM90A26D6RGX4 464 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 ADAP1O75689 374 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 P0DMU3 169 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 FAM231AP0DMU4 169 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 FAM231CP0DMU5 169 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 NPY1RP25929 384 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 C2orf83Q53S99 150 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 ETFRF1Q6IPR1 90 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 PRSS54Q6PEW0 395 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 ZNF767PQ75MW2 155 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 CSNK1G2-AS1Q8NCQ2 148 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 NRN1Q9NPD7 142 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 XCL2Q9UBD3 114 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 HSPB7Q9UBY9 170 aa12.72□□□□□ -0.37
SDR39U1-219ENST00000556523 RGS21Q2M5E4 152 aa12.71□□□□□ -0.37
SDR39U1-219ENST00000556523 SIGLEC15Q6ZMC9 328 aa12.71□□□□□ -0.37
SDR39U1-219ENST00000556523 NOXA1Q86UR1 476 aa12.71□□□□□ -0.37
SDR39U1-219ENST00000556523 OR1S1Q8NH92 325 aa12.71□□□□□ -0.37
SDR39U1-219ENST00000556523 NDUFAF3Q9BU61 184 aa12.71□□□□□ -0.37
SDR39U1-219ENST00000556523 NUP62P37198 522 aaPredicted RBP12.7□□□□□ -0.38
SDR39U1-219ENST00000556523 USF2Q15853 346 aaPredicted RBP12.7□□□□□ -0.38
SDR39U1-219ENST00000556523 C12orf74Q32Q52 190 aa12.7□□□□□ -0.38
SDR39U1-219ENST00000556523 ACY3Q96HD9 319 aa12.7□□□□□ -0.38
SDR39U1-219ENST00000556523 SEPSECSQ9HD40 501 aaKnown RBP12.7□□□□□ -0.38
SDR39U1-219ENST00000556523 H3BMM0 161 aa12.69□□□□□ -0.38
SDR39U1-219ENST00000556523 TOMM40O96008 361 aa12.69□□□□□ -0.38
SDR39U1-219ENST00000556523 RD3LP0DJH9 198 aa12.69□□□□□ -0.38
SDR39U1-219ENST00000556523 POM121L12Q8N7R1 296 aa12.69□□□□□ -0.38
SDR39U1-219ENST00000556523 NPIPB3Q92617 1050 aa12.69□□□□□ -0.38
SDR39U1-219ENST00000556523 PFDN2Q9UHV9 154 aa12.69□□□□□ -0.38
SDR39U1-219ENST00000556523 MED6O75586 246 aa12.68□□□□□ -0.38
SDR39U1-219ENST00000556523 NXPH3O95157 252 aa12.68□□□□□ -0.38
SDR39U1-219ENST00000556523 HLA-DRB4P13762 266 aa12.68□□□□□ -0.38
SDR39U1-219ENST00000556523 ID3Q02535 119 aa12.68□□□□□ -0.38
SDR39U1-219ENST00000556523 OXA1LQ15070 435 aa12.68□□□□□ -0.38
SDR39U1-219ENST00000556523 IAH1Q2TAA2 248 aaPredicted RBP12.68□□□□□ -0.38
SDR39U1-219ENST00000556523 HLA-DRB4X5D2U9 266 aa12.68□□□□□ -0.38
SDR39U1-219ENST00000556523 C7orf66A4D0T2 115 aa12.67□□□□□ -0.38
SDR39U1-219ENST00000556523 TMEM189A5PLL7 270 aa12.67□□□□□ -0.38
SDR39U1-219ENST00000556523 BUB3O43684 328 aa12.67□□□□□ -0.38
SDR39U1-219ENST00000556523 NKX2-1P43699 371 aaPredicted RBP12.67□□□□□ -0.38
SDR39U1-219ENST00000556523 ATP5IP56385 69 aaPredicted RBP12.67□□□□□ -0.38
SDR39U1-219ENST00000556523 UBE2DNLQ8IWF7 75 aa12.67□□□□□ -0.38
SDR39U1-219ENST00000556523 OR4D5Q8NGN0 318 aa12.67□□□□□ -0.38
SDR39U1-219ENST00000556523 DTD1Q8TEA8 209 aa12.67□□□□□ -0.38
SDR39U1-219ENST00000556523 PBDC1Q9BVG4 233 aa12.67□□□□□ -0.38
SDR39U1-219ENST00000556523 RBKSQ9H477 322 aa12.67□□□□□ -0.38
SDR39U1-219ENST00000556523 IFNA10P01566 189 aa12.66□□□□□ -0.38
SDR39U1-219ENST00000556523 SPART-AS1P0CW21 52 aa12.66□□□□□ -0.38
SDR39U1-219ENST00000556523 EMP1P54849 157 aa12.66□□□□□ -0.38
SDR39U1-219ENST00000556523 ZBTB8BQ8NAP8 495 aaPredicted RBP12.66□□□□□ -0.38
SDR39U1-219ENST00000556523 OR51G1Q8NGK1 321 aa12.66□□□□□ -0.38
SDR39U1-219ENST00000556523 CIB3Q96Q77 187 aaPredicted RBP12.66□□□□□ -0.38
SDR39U1-219ENST00000556523 U3KQ87 197 aa12.66□□□□□ -0.38
SDR39U1-219ENST00000556523 KIAA1109Q2LD37 5005 aa12.66□□□□□ -0.38
SDR39U1-219ENST00000556523 IGHV3OR16-12A0A075B7B8 117 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 TEX48A0A1B0GUV7 120 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 PRSS29PA6NIE9 313 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 M0R2N4 97 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 SYNGR2O43760 224 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 IGKV3-20P01619 116 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 PSG1P11464 419 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 TMEM170AQ8WVE7 144 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 RNF125Q96EQ8 232 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 C2orf50Q96LR7 162 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 NEU1Q99519 415 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 RFNGQ9Y644 331 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 PCLOQ9Y6V0 5065 aa12.65□□□□□ -0.38
SDR39U1-219ENST00000556523 C5orf51A6NDU8 294 aa12.64□□□□□ -0.39
SDR39U1-219ENST00000556523 SMIM9A6NGZ8 99 aa12.64□□□□□ -0.39
SDR39U1-219ENST00000556523 CCSO14618 274 aa12.64□□□□□ -0.39
SDR39U1-219ENST00000556523 ID1P41134 155 aa12.64□□□□□ -0.39
SDR39U1-219ENST00000556523 OR8G2PQ6IF36 304 aa12.64□□□□□ -0.39
SDR39U1-219ENST00000556523 GSG1LQ6UXU4 331 aa12.64□□□□□ -0.39
SDR39U1-219ENST00000556523 ZNF705AQ6ZN79 300 aaPredicted RBP12.64□□□□□ -0.39
SDR39U1-219ENST00000556523 LINC00052Q96N35 136 aa12.64□□□□□ -0.39
SDR39U1-219ENST00000556523 SCRT1Q9BWW7 348 aa12.64□□□□□ -0.39
SDR39U1-219ENST00000556523 GSKIPQ9P0R6 139 aa12.64□□□□□ -0.39
SDR39U1-219ENST00000556523 A0A1B0GVY2 172 aa12.63□□□□□ -0.39
SDR39U1-219ENST00000556523 ZFP92A6NM28 416 aa12.63□□□□□ -0.39
SDR39U1-219ENST00000556523 ZNF705FA8MVS1 300 aaPredicted RBP12.63□□□□□ -0.39
SDR39U1-219ENST00000556523 FAM25EA8MYX2 175 aa12.63□□□□□ -0.39
SDR39U1-219ENST00000556523 SSNA1O43805 119 aa12.63□□□□□ -0.39
SDR39U1-219ENST00000556523 ZNF705DP0CH99 300 aaPredicted RBP12.63□□□□□ -0.39
SDR39U1-219ENST00000556523 ZNF705BP0CI00 300 aaPredicted RBP12.63□□□□□ -0.39
SDR39U1-219ENST00000556523 FXYD7P58549 80 aa12.63□□□□□ -0.39
SDR39U1-219ENST00000556523 SLC35E1Q96K37 410 aa12.63□□□□□ -0.39
SDR39U1-219ENST00000556523 ALG5Q9Y673 324 aa12.63□□□□□ -0.39
SDR39U1-219ENST00000556523 FABP1P07148 127 aa12.62□□□□□ -0.39
SDR39U1-219ENST00000556523 MED14OSP0DP75 135 aa12.62□□□□□ -0.39
SDR39U1-219ENST00000556523 PSMB3P49720 205 aa12.62□□□□□ -0.39
SDR39U1-219ENST00000556523 POLR2GP62487 172 aaKnown RBP eCLIP12.62□□□□□ -0.39
SDR39U1-219ENST00000556523 RPP30P78346 268 aaKnown RBP12.62□□□□□ -0.39
SDR39U1-219ENST00000556523 IL15RAQ13261 267 aa12.62□□□□□ -0.39
SDR39U1-219ENST00000556523 FOXI2Q6ZQN5 318 aa12.62□□□□□ -0.39
SDR39U1-219ENST00000556523 OR4B1Q8NGF8 309 aa12.62□□□□□ -0.39
SDR39U1-219ENST00000556523 PPP1R14BQ96C90 147 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms