RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 SMCO3A2RU48 225 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 C7orf66A4D0T2 115 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 FAM25EA8MYX2 175 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 K7EPK0 472 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 SOCS3O14543 225 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 DEFB4AO15263 64 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 ORM2P19652 201 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 AP2S1P53680 142 aaPredicted RBP5.91□□□□□ -1.46
VTI1B-206ENST00000556461 AKR1C1Q04828 323 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 ASAH1Q13510 395 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 PMS2P11Q13670 270 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 GDF5OSQ5U4N7 250 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 TMEM144Q7Z5S9 345 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 C12orf45Q8N5I9 185 aaPredicted RBP5.91□□□□□ -1.46
VTI1B-206ENST00000556461 OR11H2Q8NH07 326 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 RARRES2Q99969 163 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 SLC25A32Q9H2D1 315 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 C11orf1Q9H5F2 150 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 CLEC5AQ9NY25 188 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 PTTG2Q9NZH5 202 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 DOK5Q9P104 306 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 EPPK1P58107 5090 aaKnown RBP5.9□□□□□ -1.46
VTI1B-206ENST00000556461 C5orf51A6NDU8 294 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 ZNF98A6NK75 572 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 H3BMM0 161 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 TSC22D2O75157 780 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 UPK1BO75841 260 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 FABP1P07148 127 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 DLK1P80370 383 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 IL15RAQ13261 267 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 ZNF846Q147U1 533 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 IGFL4Q6B9Z1 124 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 MZT2BQ6NZ67 158 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 PATE2Q6UY27 113 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 CYP2G1PQ6ZSU1 146 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 OR1B1Q8NGR6 318 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 GATAD1Q8WUU5 269 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 PPP1R14BQ96C90 147 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 C20orf173Q96LM9 149 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 SCRT1Q9BWW7 348 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 SLC25A22Q9H936 323 aa5.9□□□□□ -1.46
VTI1B-206ENST00000556461 LSM5Q9Y4Y9 91 aaKnown RBP5.9□□□□□ -1.46
VTI1B-206ENST00000556461 DNAH6Q9C0G6 4158 aa5.9□□□□□ -1.47
VTI1B-206ENST00000556461 CXorf65A6NEN9 183 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 FAM24AA6NFZ4 105 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 F6UB75 175 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 IL5P05113 134 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 RBMY1A1P0DJD3 496 aaKnown RBP5.89□□□□□ -1.47
VTI1B-206ENST00000556461 RBMY1CP0DJD4 496 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 FXYD7P58549 80 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 TAS2R30P59541 319 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 SNRPD3P62318 126 aaKnown RBP5.89□□□□□ -1.47
VTI1B-206ENST00000556461 SLC38A11Q08AI6 406 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 RBMY1FQ15415 496 aaKnown RBP5.89□□□□□ -1.47
VTI1B-206ENST00000556461 C1orf194Q5T5A4 169 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 NRARPQ7Z6K4 114 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 OR8I2Q8N0Y5 310 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 CSNK1G2-AS1Q8NCQ2 148 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 BPIFCQ8NFQ6 507 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 C2orf50Q96LR7 162 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 LINC00052Q96N35 136 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 RSG1Q9BU20 258 aa5.89□□□□□ -1.47
VTI1B-206ENST00000556461 SEPSECSQ9HD40 501 aaKnown RBP5.89□□□□□ -1.47
VTI1B-206ENST00000556461 TRAV8-2A0A0B4J237 113 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 IGSF23A1L1A6 192 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 H3BRN7 92 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 DEDDO75618 318 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 CST7O76096 145 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 SIX6O95475 246 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 CFDP00746 253 aaPredicted RBP5.88□□□□□ -1.47
VTI1B-206ENST00000556461 IGKV3-20P01619 116 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 LINC00869P0C866 280 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 PRB4P10163 310 aaPredicted RBP5.88□□□□□ -1.47
VTI1B-206ENST00000556461 SPP1P10451 314 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 HLA-DRB4P13762 266 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 NUP62P37198 522 aaPredicted RBP5.88□□□□□ -1.47
VTI1B-206ENST00000556461 BCAP31P51572 246 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 PLP1P60201 277 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 NANOS2P60321 138 aaKnown RBP5.88□□□□□ -1.47
VTI1B-206ENST00000556461 RAB32Q13637 225 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 LCE2DQ5TA82 110 aaPredicted RBP5.88□□□□□ -1.47
VTI1B-206ENST00000556461 MORN3Q6PF18 240 aaPredicted RBP5.88□□□□□ -1.47
VTI1B-206ENST00000556461 Q8NAQ8 132 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 OR10P1Q8NGE3 313 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 ENKURQ8TC29 256 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 UHRF2Q96PU4 802 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 MGST2Q99735 147 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 SHANK2-AS3Q9BTD1 123 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 TMEM147Q9BVK8 224 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 SLC25A39Q9BZJ4 359 aaPredicted RBP5.88□□□□□ -1.47
VTI1B-206ENST00000556461 SAV1Q9H4B6 383 aaPredicted RBP5.88□□□□□ -1.47
VTI1B-206ENST00000556461 NPVFQ9HCQ7 196 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 FBXL17Q9UF56 701 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 PFDN2Q9UHV9 154 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 SLC45A2Q9UMX9 530 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 HLA-DRB4X5D2U9 266 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 X6R8D5 127 aa5.88□□□□□ -1.47
VTI1B-206ENST00000556461 ELOA3CA0A087WX78 387 aaPredicted RBP5.87□□□□□ -1.47
VTI1B-206ENST00000556461 IGHV4-28A0A0C4DH34 117 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms