RNA–Protein interactions for RNA: ENST00000556401.2

SUB1P2-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 2, humanhuman

BASIC

Gene SUB1P2, Length 297 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P2-201ENST00000556401 SLC35A3Q9Y2D2 325 aa0.18□□□□□ -2.38
SUB1P2-201ENST00000556401 ARL5AQ9Y689 179 aa0.18□□□□□ -2.38
SUB1P2-201ENST00000556401 CEP192Q8TEP8 1941 aa0.18□□□□□ -2.38
SUB1P2-201ENST00000556401 ASCC3Q8N3C0 2202 aaKnown RBP0.18□□□□□ -2.38
SUB1P2-201ENST00000556401 TRPM1Q7Z4N2 1603 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 TRGV10A0A0A0MS01 117 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 TRAV3A0A0B4J244 114 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 TRBV6-4A0A1B0GX49 114 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 CLDN25C9JDP6 229 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 TAX1BP3O14907 124 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 CCL16O15467 120 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 KDM6AO15550 1401 aaPredicted RBP0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 NUPR1O60356 82 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 GGCTO75223 188 aaKnown RBP0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 SERPINA1P01009 418 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 IFNA7P01567 189 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 ERP29P30040 261 aaKnown RBP0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 SRP14P37108 136 aaKnown RBP0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 SERPINB9P50453 376 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 EIF5AP63241 154 aaKnown RBP0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 MRPS15P82914 257 aaKnown RBP0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 KRR1Q13601 381 aaKnown RBP0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 LYRM7Q5U5X0 104 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 PHF5AQ7RTV0 110 aaKnown RBP0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 PDZD9Q8IXQ8 264 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 EXOC3-AS1Q8N2X6 119 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 Q8N6K4 173 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 LINC00301Q8NCQ3 95 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 PXT1Q8NFP0 134 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 OR10K1Q8NGX5 313 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 CHMP6Q96FZ7 201 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 AMELYQ99218 206 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 GPER1Q99527 375 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 TMEM70Q9BUB7 260 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 PRNDQ9UKY0 176 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 PYCARDQ9ULZ3 195 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 ARL2BPQ9Y2Y0 163 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 UTP11Q9Y3A2 253 aaKnown RBP0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 NISCHQ9Y2I1 1504 aa0.17□□□□□ -2.38
SUB1P2-201ENST00000556401 CNTRLQ7Z7A1 2325 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 FRMPD1Q5SYB0 1578 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 KIF13BQ9NQT8 1826 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 TRAV5A0A0B4J249 113 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 IGHV1-58A0A0C4DH39 117 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 TCRBV4S1A1TA0A5B7 111 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 C1orf196B1AJZ1 125 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 TMEM256-PLSCR3K7ERE1 68 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 CCL25O15444 150 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 NDUFB3O43676 98 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 TIMM17BO60830 172 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 GADD45GO95257 159 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 HLA-EP13747 358 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 DYNLT3P51808 116 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 UBE2BP63146 152 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 TMED2Q15363 201 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 SPA17Q15506 151 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 LINC00322Q6ZN03 302 aaPredicted RBP0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 LYG2Q86SG7 212 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 SLC30A7Q8NEW0 376 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 NUP35Q8NFH5 326 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 LINC00052Q96N35 136 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 C9orf16Q9BUW7 83 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 SH3BGRL3Q9H299 93 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 ENY2Q9NPA8 101 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 CDC42SE1Q9NRR8 79 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 ACER3Q9NUN7 267 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 OPTCQ9UBM4 332 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 ASB4Q9Y574 426 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 ARHGEF11O15085 1522 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 SCN3AQ9NY46 2000 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 NCAPD3P42695 1498 aa0.16□□□□□ -2.38
SUB1P2-201ENST00000556401 MIA2Q96PC5 1412 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 IGSF10Q6WRI0 2623 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 TRAV27A0A087WT01 109 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 TRAV10A0A0B4J240 114 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 CCDC160A6NGH7 325 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 C17orf112F2Z3M2 114 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 CRHP06850 196 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 ZNF25P17030 456 aaPredicted RBP0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 INSL3P51460 131 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 EFNA4P52798 201 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 DEFA3P59666 94 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 NCALDP61601 193 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 RHOBP62745 196 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 MRPS25P82663 173 aaKnown RBP0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 PSG9Q00887 426 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 TAF1AQ15573 450 aaPredicted RBP0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 SPRNQ5BIV9 151 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 BCL2L15Q5TBC7 163 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 C1orf134Q5TEV5 83 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 TEX261Q6UWH6 196 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 C2orf82Q6UX34 121 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 C4orf22Q6V702 233 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 PLPP5Q8NEB5 264 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 Q8TAT8 98 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 TMEM254Q8TBM7 123 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 TP53RKQ96S44 253 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 GPX7Q96SL4 187 aaPredicted RBP0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 PRRT1Q99946 306 aa0.15□□□□□ -2.39
SUB1P2-201ENST00000556401 SLC25A21Q9BQT8 299 aaPredicted RBP0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms